prot_P-littoralis_Contig141.10.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig141.10.1
Unique Nameprot_P-littoralis_Contig141.10.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length154
Homology
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BLAST of mRNA_P-littoralis_Contig141.10.1 vs. uniprot
Match: D7FTB1_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTB1_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 6.140e-66
Identity = 109/154 (70.78%), Postives = 118/154 (76.62%), Query Frame = 0 
Query:    1 MFSLGSSESSTIASSAGGDFRG--PGPLLVAGQDNPRRPKTSDHEDRQLLRLTGFKEEDVELMKVLFDMYDRDRDGVLTVEEACHLCTTLGYHPAENSSIRSSEEGRVSFRQFVQSAGFVRGNHVPPAGRGGHTKNFFRMANRNASTPMTPKQA 152
            MFS  SSESSTI SSAGGDFR   PGPLLVAG+ NPRRPK++DHE RQLLRLTGFKEEDVELMKVLFDMYDRDRDG+LTVEEAC LCT                       QF+QSAGFVRG+HVPP  RGGHTK+FFRMANR++STPM  KQA
Sbjct:    1 MFSFASSESSTIVSSAGGDFRAFKPGPLLVAGEANPRRPKSTDHEHRQLLRLTGFKEEDVELMKVLFDMYDRDRDGMLTVEEACLLCT-----------------------QFIQSAGFVRGSHVPPTARGGHTKHFFRMANRSSSTPMGSKQA 131
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BLAST of mRNA_P-littoralis_Contig141.10.1 vs. uniprot
Match: A0A7S0DQY7_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DQY7_9EUKA)

HSP 1 Score: 53.9 bits (128), Expect = 4.430e-6
Identity = 23/89 (25.84%), Postives = 53/89 (59.55%), Query Frame = 0 
Query:   31 QDNPRRPKTSDHEDRQLLRLTGFKEEDVELMKVLFDMYDRDRDGVLTVEEACHLCTTLGYHPAEN------SSIRSSEEGRVSFRQFVQ 113
            ++   +P+      R++L+  GF E+D+E +K  F ++D+++DG ++V E   +  T+G  P+E+      +  +++ +G + F++FV+
Sbjct:    7 ENGSSKPEDEGKAHREVLKENGFTEDDLEDLKAAFRLFDKNKDGHISVIELKEVFRTIGIEPSESEFKSMMADAKANSDGDIDFKEFVR 95
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig141.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTB1_ECTSI6.140e-6670.78EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S0DQY7_9EUKA4.430e-625.84Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 45..116
e-value: 6.1E-8
score: 34.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 56..91
score: 12.7281
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 34..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig141contigP-littoralis_Contig141:28494..32236 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig141.10.1mRNA_P-littoralis_Contig141.10.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig141 26489..32236 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig141.10.1 ID=prot_P-littoralis_Contig141.10.1|Name=mRNA_P-littoralis_Contig141.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=154bp
MFSLGSSESSTIASSAGGDFRGPGPLLVAGQDNPRRPKTSDHEDRQLLRL
TGFKEEDVELMKVLFDMYDRDRDGVLTVEEACHLCTTLGYHPAENSSIRS
SEEGRVSFRQFVQSAGFVRGNHVPPAGRGGHTKNFFRMANRNASTPMTPK
QAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair