prot_P-littoralis_Contig1404.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1404.1.1
Unique Nameprot_P-littoralis_Contig1404.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length87
Homology
BLAST of mRNA_P-littoralis_Contig1404.1.1 vs. uniprot
Match: A0A6H5JNH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNH6_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 3.140e-50
Identity = 79/86 (91.86%), Postives = 81/86 (94.19%), Query Frame = 0
Query:    1 MLPTAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELAARKETSITHVTSEYQHADFLTKAISRESFELHRDFVMNLQ 86
            MLP AGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIREL  RKE SITHVTSE+QHADFLTKAIS+ESF LHRDFVMNLQ
Sbjct:   34 MLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNLQ 119          
BLAST of mRNA_P-littoralis_Contig1404.1.1 vs. uniprot
Match: A0A6H5K826_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K826_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 7.180e-46
Identity = 73/86 (84.88%), Postives = 77/86 (89.53%), Query Frame = 0
Query:    1 MLPTAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELAARKETSITHVTSEYQHADFLTKAISRESFELHRDFVMNLQ 86
            MLP AGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIREL  RKE SITHV +++QHADFLTKAI +E   LHRDFVMNLQ
Sbjct:   18 MLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAICKEPCALHRDFVMNLQ 103          
BLAST of mRNA_P-littoralis_Contig1404.1.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 1.190e-44
Identity = 79/86 (91.86%), Postives = 81/86 (94.19%), Query Frame = 0
Query:    1 MLPTAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELAARKETSITHVTSEYQHADFLTKAISRESFELHRDFVMNLQ 86
            MLP AGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIREL  RKE SITHVTSE+QHADFLTKAIS+ESF LHRDFVMNLQ
Sbjct: 1387 MLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNLQ 1472          
BLAST of mRNA_P-littoralis_Contig1404.1.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 2.210e-44
Identity = 75/86 (87.21%), Postives = 79/86 (91.86%), Query Frame = 0
Query:    1 MLPTAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELAARKETSITHVTSEYQHADFLTKAISRESFELHRDFVMNLQ 86
            MLP AGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIREL  RKE SIT+V + +QHADFLTKAIS+ESF LHRDFVMNLQ
Sbjct:  236 MLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAISKESFALHRDFVMNLQ 321          
BLAST of mRNA_P-littoralis_Contig1404.1.1 vs. uniprot
Match: A0A6H5JTT9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT9_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 3.160e-44
Identity = 73/85 (85.88%), Postives = 75/85 (88.24%), Query Frame = 0
Query:    1 MLPTAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELAARKETSITHVTSEYQHADFLTKAISRESFELHRDFVMNL 85
            MLP AGMPCIPVFEDN   IQIAHNPITNSNSKHIDVRHHFIREL  RKE SITHVTSE+QH D LTKAIS+ESF LHRDFVMNL
Sbjct:   84 MLPDAGMPCIPVFEDNNQRIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHVDSLTKAISKESFALHRDFVMNL 168          
BLAST of mRNA_P-littoralis_Contig1404.1.1 vs. uniprot
Match: A0A6H5KPI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPI2_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 3.460e-44
Identity = 71/80 (88.75%), Postives = 73/80 (91.25%), Query Frame = 0
Query:    7 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELAARKETSITHVTSEYQHADFLTKAISRESFELHRDFVMNLQ 86
            MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIREL  RKE S THVTSE+QHADFLTKAIS+E F LHRDFVMN Q
Sbjct:    1 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISNTHVTSEFQHADFLTKAISKEPFALHRDFVMNSQ 80          
BLAST of mRNA_P-littoralis_Contig1404.1.1 vs. uniprot
Match: A0A6H5K684_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K684_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 4.520e-44
Identity = 74/83 (89.16%), Postives = 77/83 (92.77%), Query Frame = 0
Query:    1 MLPTAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELAARKETSITHVTSEYQHADFLTKAISRESFELHRDFVM 83
            MLP AGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIREL  RKE SITHVTSE+QHADFLTKA S+ESF LHRDFV+
Sbjct:  226 MLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKATSKESFALHRDFVI 308          
BLAST of mRNA_P-littoralis_Contig1404.1.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 1.090e-43
Identity = 74/86 (86.05%), Postives = 78/86 (90.70%), Query Frame = 0
Query:    1 MLPTAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELAARKETSITHVTSEYQHADFLTKAISRESFELHRDFVMNLQ 86
            MLP A MPCIPVFEDNQGAIQI HNPITNSNSKHIDVRHHFIREL  RKE SITHV +++QHADFLTKAIS+ESF LHRDFVMNLQ
Sbjct:  291 MLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESFALHRDFVMNLQ 376          
BLAST of mRNA_P-littoralis_Contig1404.1.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 1.880e-43
Identity = 75/86 (87.21%), Postives = 78/86 (90.70%), Query Frame = 0
Query:    1 MLPTAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELAARKETSITHVTSEYQHADFLTKAISRESFELHRDFVMNLQ 86
            MLP AGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIREL  RKE SITHV + +QHADFLTKAIS+ES  LHRDFVMNLQ
Sbjct:  353 MLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAISKESLGLHRDFVMNLQ 438          
BLAST of mRNA_P-littoralis_Contig1404.1.1 vs. uniprot
Match: A0A6H5K9U4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U4_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 3.440e-43
Identity = 77/86 (89.53%), Postives = 79/86 (91.86%), Query Frame = 0
Query:    1 MLPTAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELAARKETSITHVTSEYQHADFLTKAISRESFELHRDFVMNLQ 86
            M P A MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIREL  RKE SITHVTSE+QHADFLTKAIS+ESF LHRDFVMNLQ
Sbjct:  694 MWPDASMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNLQ 779          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1404.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNH6_9PHAE3.140e-5091.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K826_9PHAE7.180e-4684.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHY5_9PHAE1.190e-4491.86Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5KP70_9PHAE2.210e-4487.21Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTT9_9PHAE3.160e-4485.88Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPI2_9PHAE3.460e-4488.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K684_9PHAE4.520e-4489.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE1.090e-4386.05Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JEF2_9PHAE1.880e-4387.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K9U4_9PHAE3.440e-4389.53Integrase catalytic domain-containing protein n=1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF343SUBFAMILY NOT NAMEDcoord: 11..81
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 11..81
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 10..73
e-value: 4.68682E-27
score: 94.0721

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1404contigP-littoralis_Contig1404:10106..10366 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1404.1.1mRNA_P-littoralis_Contig1404.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1404 10021..10366 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1404.1.1 ID=prot_P-littoralis_Contig1404.1.1|Name=mRNA_P-littoralis_Contig1404.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=87bp
MLPTAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELAARKE
TSITHVTSEYQHADFLTKAISRESFELHRDFVMNLQ*
back to top