prot_P-littoralis_Contig140.84.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig140.84.2
Unique Nameprot_P-littoralis_Contig140.84.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length130
Homology
BLAST of mRNA_P-littoralis_Contig140.84.2 vs. uniprot
Match: D7G6S7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6S7_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 5.760e-91
Identity = 124/129 (96.12%), Postives = 126/129 (97.67%), Query Frame = 0
Query:    1 MAAETKGQEAQDVVMSESGKGPDPGLGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 129
            MAAETKGQE QDVVM ESGKGP+PG+GQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ ANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS
Sbjct:    1 MAAETKGQEPQDVVMGESGKGPEPGIGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ-ANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 128          
BLAST of mRNA_P-littoralis_Contig140.84.2 vs. uniprot
Match: A0A7S2Y0P1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0P1_9STRA)

HSP 1 Score: 218 bits (556), Expect = 1.470e-71
Identity = 104/127 (81.89%), Postives = 111/127 (87.40%), Query Frame = 0
Query:    1 MAAETKGQEAQDVVMSESGKGPDPGLGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 127
            MAAETKG+   DV M ++ +  +       PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ ANPSPNNENGLS+AFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIE+IPGYGSL
Sbjct:    1 MAAETKGE--TDVEMLDAKESSN------VPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ-ANPSPNNENGLSVAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIEKIPGYGSL 118          
BLAST of mRNA_P-littoralis_Contig140.84.2 vs. uniprot
Match: A0A7S3K273_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K273_9STRA)

HSP 1 Score: 213 bits (543), Expect = 5.100e-69
Identity = 94/99 (94.95%), Postives = 96/99 (96.97%), Query Frame = 0
Query:   31 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 129
            P+FEIKKWNA+ MWSWDICADTCAICRNSLNEPSIEYQ ANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL S
Sbjct:   62 PKFEIKKWNAICMWSWDICADTCAICRNSLNEPSIEYQ-ANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLGS 159          
BLAST of mRNA_P-littoralis_Contig140.84.2 vs. uniprot
Match: A0A1E7FMU3_9STRA (Ring-box protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMU3_9STRA)

HSP 1 Score: 211 bits (538), Expect = 1.030e-68
Identity = 95/104 (91.35%), Postives = 98/104 (94.23%), Query Frame = 0
Query:   26 LGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 129
            +G  APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ ANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG LAS
Sbjct:   25 VGSAAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ-ANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQLAS 127          
BLAST of mRNA_P-littoralis_Contig140.84.2 vs. uniprot
Match: B7G7T1_PHATC (Predicted protein n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7T1_PHATC)

HSP 1 Score: 210 bits (535), Expect = 3.710e-68
Identity = 99/126 (78.57%), Postives = 107/126 (84.92%), Query Frame = 0
Query:    8 QEAQDVVMSESGKGPD------PGLGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 127
            ++++DV M E+ +G D      P     APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ ANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct:    8 EDSKDVEMEETVEGADSEEVVKPKASGSAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ-ANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 132          
BLAST of mRNA_P-littoralis_Contig140.84.2 vs. uniprot
Match: A0A6U3THL3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3THL3_9STRA)

HSP 1 Score: 207 bits (527), Expect = 5.950e-67
Identity = 97/119 (81.51%), Postives = 100/119 (84.03%), Query Frame = 0
Query:    9 EAQDVVMSESGKGPDPGLGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 127
            E  D   SE  K P   L    PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ ANPSP N+NGLSIAFG CGHVFHLDCIQRWL+TRSVCPLCNKEW+FAKIERIPGYG L
Sbjct:   16 EMSDAAASEPKKKPSKAL--APPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ-ANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLRTRSVCPLCNKEWDFAKIERIPGYGQL 131          
BLAST of mRNA_P-littoralis_Contig140.84.2 vs. uniprot
Match: A0A4D9CQ35_9STRA (RING-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQ35_9STRA)

HSP 1 Score: 206 bits (525), Expect = 1.510e-66
Identity = 91/101 (90.10%), Postives = 94/101 (93.07%), Query Frame = 0
Query:   27 GQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 127
            G  APRFEIKKWNAV MWSWDICADTCAICRN+LNEPSIEYQ ANPSPNNENGLSIAFGCC HVFHLDCIQRWLK RSVCPLCNKEWEF+KIERIPGY +L
Sbjct:   39 GAAAPRFEIKKWNAVTMWSWDICADTCAICRNNLNEPSIEYQ-ANPSPNNENGLSIAFGCCSHVFHLDCIQRWLKARSVCPLCNKEWEFSKIERIPGYNAL 138          
BLAST of mRNA_P-littoralis_Contig140.84.2 vs. uniprot
Match: A0A1Z5J6S6_FISSO (RING-box protein 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6S6_FISSO)

HSP 1 Score: 206 bits (523), Expect = 1.640e-66
Identity = 92/98 (93.88%), Postives = 94/98 (95.92%), Query Frame = 0
Query:   30 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 127
            APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ ANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct:   23 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ-ANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 119          
BLAST of mRNA_P-littoralis_Contig140.84.2 vs. uniprot
Match: A0A7S3PD50_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD50_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.200e-66
Identity = 92/98 (93.88%), Postives = 94/98 (95.92%), Query Frame = 0
Query:   30 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 127
            APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ ANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct:   32 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ-ANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 128          
BLAST of mRNA_P-littoralis_Contig140.84.2 vs. uniprot
Match: A0A7S1BRM9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BRM9_9STRA)

HSP 1 Score: 206 bits (524), Expect = 2.520e-66
Identity = 92/98 (93.88%), Postives = 95/98 (96.94%), Query Frame = 0
Query:   30 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 127
            A RFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ ANPSPNNENGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEWE+AKIE+IPG+GSL
Sbjct:   47 AKRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ-ANPSPNNENGLSIAFGACGHVFHLDCIQRWLKTRSVCPLCNKEWEYAKIEKIPGFGSL 143          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig140.84.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6S7_ECTSI5.760e-9196.12RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S2Y0P1_9STRA1.470e-7181.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3K273_9STRA5.100e-6994.95Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A1E7FMU3_9STRA1.030e-6891.35Ring-box protein n=1 Tax=Fragilariopsis cylindrus ... [more]
B7G7T1_PHATC3.710e-6878.57Predicted protein n=4 Tax=Phaeodactylum tricornutu... [more]
A0A6U3THL3_9STRA5.950e-6781.51Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A4D9CQ35_9STRA1.510e-6690.10RING-type domain-containing protein n=3 Tax=Monodo... [more]
A0A1Z5J6S6_FISSO1.640e-6693.88RING-box protein 1 n=2 Tax=Fistulifera solaris Tax... [more]
A0A7S3PD50_9STRA2.200e-6693.88Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S1BRM9_9STRA2.520e-6693.88Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 53..109
e-value: 1.3E-5
score: 34.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 53..110
score: 11.869652
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 26..120
e-value: 3.2E-28
score: 99.8
IPR024766Zinc finger, RING-H2-typePFAMPF12678zf-rbx1coord: 51..110
e-value: 7.1E-20
score: 71.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR11210:SF2RING-BOX PROTEIN 1A-RELATEDcoord: 31..118
NoneNo IPR availablePANTHERPTHR11210RING BOXcoord: 31..118
NoneNo IPR availableCDDcd16485mRING-H2-C3H2C2D_RBX1coord: 51..113
e-value: 1.34607E-31
score: 104.759
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 31..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig140contigP-littoralis_Contig140:409107..411087 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig140.84.2mRNA_P-littoralis_Contig140.84.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig140 408149..411087 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig140.84.2 ID=prot_P-littoralis_Contig140.84.2|Name=mRNA_P-littoralis_Contig140.84.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=130bp
MAAETKGQEAQDVVMSESGKGPDPGLGQVAPRFEIKKWNAVAMWSWDICA
DTCAICRNSLNEPSIEYQQANPSPNNENGLSIAFGCCGHVFHLDCIQRWL
KTRSVCPLCNKEWEFAKIERIPGYGSLAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR024766Znf_RING_H2