prot_P-littoralis_Contig140.53.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig140.53.1
Unique Name	prot_P-littoralis_Contig140.53.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	113

Homology

[Close]

BLAST of mRNA_P-littoralis_Contig140.53.1 vs. uniprot
Match: A0A6H5K005_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K005_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.630e-14
Identity = 60/108 (55.56%), Postives = 66/108 (61.11%), Query Frame = 0

Query:    7 RQATLQHQGRRDAHGSSNSHRRHKPAYIDPSPGSFSAPVARLSKWPKNVYFASDFIADKAAAA------TAAGVRRRAPRRRGNKASETEHGPRGTRVRHE--PVTRM 106
            +QATLQ Q  +D   S+NS RR  P Y     G+FS PVA LSKWPKNV+FASDFIADKAAAA      T    R  APR R N     E G RG+RV  E  PVTRM
Sbjct:   36 KQATLQSQQSQDVGNSANS-RRPTPTYSKTGSGAFSKPVAHLSKWPKNVFFASDFIADKAAAAACRKRSTVKSSRGAAPRCRRNAGEGKEMG-RGSRVLGEKAPVTRM 141

[Close]

BLAST of mRNA_P-littoralis_Contig140.53.1 vs. uniprot
Match: D7G6P3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6P3_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 6.710e-13
Identity = 62/116 (53.45%), Postives = 70/116 (60.34%), Query Frame = 0

Query:    7 RQATLQHQGRRDAHGSSNSHRRHKPAYIDPSPGSFSAPVARLSKWPKNVYFASDFIADKAAAAT----AAGVRRR---APRRRGNKASETEHGPRGTRVRHE--PVTRMKMPSAAS 113
            RQATLQ Q   D   S+NS RR  P Y     G+FS PV RLSKWPKNV+FASDFIADKAAAA     + G   R   APR R N A E +   RG+R   E  PVTRMK  S+ +
Sbjct:    8 RQATLQSQ---DVENSTNS-RRPSPKYSKTGSGAFSTPVVRLSKWPKNVFFASDFIADKAAAAACRKRSTGKSSRGGAAPRCRRN-AGEGKTMGRGSRAMGEEAPVTRMKENSSTT 118

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig140.53.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig140.53.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5K005_9PHAE	1.630e-14	55.56	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G6P3_ECTSI	6.710e-13	53.45	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..113

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig140	contig	P-littoralis_Contig140:242443..246014 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig140.53.1	mRNA_P-littoralis_Contig140.53.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig140 242293..246014 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig140.53.1 ID=prot_P-littoralis_Contig140.53.1|Name=mRNA_P-littoralis_Contig140.53.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=113bp
MHPAMQRQATLQHQGRRDAHGSSNSHRRHKPAYIDPSPGSFSAPVARLSK
WPKNVYFASDFIADKAAAATAAGVRRRAPRRRGNKASETEHGPRGTRVRH
EPVTRMKMPSAAS