prot_P-littoralis_Contig140.34.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig140.34.3
Unique Nameprot_P-littoralis_Contig140.34.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length602
Homology
BLAST of mRNA_P-littoralis_Contig140.34.3 vs. uniprot
Match: A0A6H5KPK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPK2_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 4.440e-35
Identity = 242/631 (38.35%), Postives = 285/631 (45.17%), Query Frame = 0
Query:    1 MSARTLLPAADPFACCLVTKSSDALSDSGTLTLKNQHNSVKKRAADSGAPSAVAGXXXXXXXXXXAAPPVAFSTDEFDCFCWPGSDSGESAGDDETRVLNDLLRLGLEFGDLESVFGNTE--CAEGRSDSLDDEAETRGVVGSEDRVARCAEDYRYLDGGDTKELFL---------------------------LDGDLQDALLALPDLKLDLLGDEGRNQDQEKDKVGCRFGTSAASDTTTTTIATDGSDSDGTLDNIDCCGTDEIAIGCCNVPFTSVSPAATADLLAPTTXXXXXXXXXXXXXXXXXXXXXAVLSLTAAAGAAICTEVTVIDTPLSPTDCCRQNMPGVLGGEDLLVDFNAAATADLAAPATGVRGGVEGLVTSTGSGRGCELSGAEENPGHVFQESAVPADTIAAAPAGXXXXXXXXXXXXXXXXXXXXTGVSTRLLDAIDLWESA-NAYAKKXXXXXXXXXXXXXXXXXXXXXXEDGVGEDGVAPAPAPASTATWSTTKKISGSITRSNINKKKKNEFGXXXXXXXXXXXXXXXXXXXXXXXXXADKNAGKAKGKKGKSKKKVDPLVALKDARGMSRKPLIVQWLKSDGCDSDVEAEAALGKAVGSLSAISRYWGGGG 601
            MS RTL PAA   AC LVTK ++  +D+G         + KK A     P  +A              PVAF+TDEF  F WPG D  + A   E   L+DLLRLGLE GDLE VFGNT+  C     D+ + + E  G  GS DR     ++  Y  GG T+EL L                              DLQDAL  LPDL LD L D+G   D+ ++K GC                  GSDS  +   +DC G +E A            P    ++L   +  XXXXXXXXXXXXXXXXXXX                        SP +  R+  PG L GE+L+V F+A            +          T    G   S +E+N       +    ++ A                          GV TRLLDA+DLWESA NA    XXXXXXXXXXXXXXXXXXXXXX                                R+                       XXXXXXXXXXXXX        +  KGK   KVDPLV L+DARGM+RKPLIVQWLKSDGC+SD EAEAALGKAVGSLSAISRYWG GG
Sbjct:    1 MSGRTLRPAAASSACSLVTKHNEGATDTGL-----PFETPKKWAPLQAPPKVIAA-------------PVAFATDEFADFGWPGDDETKLA---EKEELDDLLRLGLELGDLECVFGNTDLNCDTADDDAEEGDFENAGDGGS-DRGGGWGKEP-YFAGGATEELLLDTDDXXXXXXXXXXXXXXXXXXXXXXXXXXDLQDALFDLPDLDLDRLEDKG---DRGQEKHGC------------------GSDSPKST-QVDC-GAEEAA----------TKPPPDLEVLQQMSPAXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------SPAELPRRETPGALPGENLVVAFDAVGDEHRPITVVDLTDAPAPXXXPTVDAGGVAPSDSEDNSDGKPDGANEHRESRACRMTDTVDITIIDTRAGASVSADAVAGVPTRLLDAVDLWESAANAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTAP------ALEDPALLVAAPATGXXXXXXXXXXXXXXXXXXXXXRATKGK---KVDPLVTLRDARGMARKPLIVQWLKSDGCESDEEAEAALGKAVGSLSAISRYWGSGG 549          
BLAST of mRNA_P-littoralis_Contig140.34.3 vs. uniprot
Match: D7FLV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV8_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 5.660e-22
Identity = 52/58 (89.66%), Postives = 55/58 (94.83%), Query Frame = 0
Query:  544 KKVDPLVALKDARGMSRKPLIVQWLKSDGCDSDVEAEAALGKAVGSLSAISRYWGGGG 601
            KKVDPLV L+DARGM+RKPLIVQWLKSDGC+SD EAEAALGKAVGSLSAISRYWG GG
Sbjct:  257 KKVDPLVTLRDARGMARKPLIVQWLKSDGCESDEEAEAALGKAVGSLSAISRYWGSGG 314          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig140.34.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KPK2_9PHAE4.440e-3538.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLV8_ECTSI5.660e-2289.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 465..544
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 473..492

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig140contigP-littoralis_Contig140:182333..188021 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig140.34.3mRNA_P-littoralis_Contig140.34.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig140 182250..189796 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig140.34.3 ID=prot_P-littoralis_Contig140.34.3|Name=mRNA_P-littoralis_Contig140.34.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=602bp
MSARTLLPAADPFACCLVTKSSDALSDSGTLTLKNQHNSVKKRAADSGAP
SAVAGAAAGAAGAGAAAPPVAFSTDEFDCFCWPGSDSGESAGDDETRVLN
DLLRLGLEFGDLESVFGNTECAEGRSDSLDDEAETRGVVGSEDRVARCAE
DYRYLDGGDTKELFLLDGDLQDALLALPDLKLDLLGDEGRNQDQEKDKVG
CRFGTSAASDTTTTTIATDGSDSDGTLDNIDCCGTDEIAIGCCNVPFTSV
SPAATADLLAPTTTTTAAAAATAPDMEVRQQQQKAVLSLTAAAGAAICTE
VTVIDTPLSPTDCCRQNMPGVLGGEDLLVDFNAAATADLAAPATGVRGGV
EGLVTSTGSGRGCELSGAEENPGHVFQESAVPADTIAAAPAGAAAAAAAA
PASAAASAAASATGVSTRLLDAIDLWESANAYAKKKKKAAAKLAARERAA
AAAAAAAEDGVGEDGVAPAPAPASTATWSTTKKISGSITRSNINKKKKNE
FGKRRRSSGGGGGTAPVLGDATTTTAAADKNAGKAKGKKGKSKKKVDPLV
ALKDARGMSRKPLIVQWLKSDGCDSDVEAEAALGKAVGSLSAISRYWGGG
G*
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