prot_P-littoralis_Contig140.15.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig140.15.1
Unique Nameprot_P-littoralis_Contig140.15.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length687
Homology
BLAST of mRNA_P-littoralis_Contig140.15.1 vs. uniprot
Match: A0A6H5KDB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB0_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 4.700e-55
Identity = 241/607 (39.70%), Postives = 268/607 (44.15%), Query Frame = 0
Query:  146 RMTVAPAAXXXXXXXXXXXXVSGAGRKDVHPGMLESEFLAATGEANTARVDGGXXXXAEGAVLASLSLEEVPYDRDLRWCNTASDSRPRPKVETSGGVFGKVGTAITNDTSDYERLDRHYQELWKDREENGPPPGRGGXXXXXXXXXXXXXXXXXXVGRTRXXXXXXXXXXXXXXXRNPNGAPPRGGYTTAAXXXXXXXXXXXXXXXXXDSAASAKPPGGWGGRGVGNGVGSPSSGDAPGAXXXXXXRGG------------------------------------SGRGERGSSAHRKRAQRSNGANKPLVGRPGG--------GARANGVQQ--PSPPANRIPQRAPAAPSFHVQGGGTAITTARXXXXXXXXXXSL--PTQA--LNNTRGWAEGRDHQHQXXXXXXXXXXXXXXXXXHPIAT----WAVEGG-GLPRSAMSPSVPPPAVTSNGGGLVGMGTPPLVPAVPSLLDHRFP-PESPEYLNDLANVLSSTP---LPLYAGQQQPQQ----QPPVVTPPLGPSL-FGGFGGRD--LFGVAGVTPKKNDNXXXXXGVTFSPYLSPQQSKMLADPSLDVDIQDICADPDLNADAPAFVPGGY 686
            +  VAP A              GA RK VHPGMLESEFLAAT +AN   V+GG           SLSLEEVPYDRDLRWCNTASDSRPRPK++  GGVFG+VGTAIT+DT DYERLDRHYQELWKDREENGPPP  G                    G   XXXXXXXXXXXXXXX   NG+  RGG                XXXXXX   A+A   GG+       G G    G A GA      R G                                                            L+G            G RANGV Q  PS        RA  A ++H Q G +A        XXXX   S+  P Q    NN RGW+EG+DHQ Q                 HP+      W++E                                 LV A+PSL       P+SPEYL DLAN LSSTP     L+ G          +P  VTPPLGPS   GG       LFG    TPK+N           SP+LSP QSK+LADPSLDVDI         NADAPAFVPGGY
Sbjct:  144 KAAVAPTAVPAPAPVAGNGFGGGAVRK-VHPGMLESEFLAATEQANGG-VEGG---------AVSLSLEEVPYDRDLRWCNTASDSRPRPKMDPQGGVFGRVGTAITHDTGDYERLDRHYQELWKDREENGPPPASG-----------------PRGGNXXXXXXXXXXXXXXXXXXXXNGSRARGG---------------RXXXXXXXXTANAPRGGGFPTTAAAMGAGRGXXGRAEGAAIAAAGREGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMGSXXXXXXXXXXXGGRANGVPQHSPSXXXXXXXHRASPALNYHGQAGVSARQARGVGTXXXXGGASVVPPFQQPLSNNVRGWSEGQDHQPQQRDQQQHGCGG------HPLVAGQGPWSMEAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLVTAMPSLXXXXXXXPDSPEYLCDLANALSSTPPXXXXLFTGHHNXXXXXXYRPSAVTPPLGPSRDLGGXXXXXXXLFG-GDFTPKQNGGSSSS---AVSPFLSPGQSKILADPSLDVDIXXXXXXXXXNADAPAFVPGGY 697          
BLAST of mRNA_P-littoralis_Contig140.15.1 vs. uniprot
Match: D8LEQ7_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEQ7_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 2.690e-44
Identity = 89/115 (77.39%), Postives = 95/115 (82.61%), Query Frame = 0
Query:  168 GAGRKDVHPGMLESEFLAATGEANTARVDGGXXXXAEGAVLASLSLEEVPYDRDLRWCNTASDSRPRPKVETSGGVFGKVGTAITNDTSDYERLDRHYQELWKDREENGPPPGRG 282
            GA RK VHPGMLESEFLAAT +AN     GG     EG V+ SLSLEEVPYDRDLRWCNTASDSRPRPK++  GGVFG+VGTAIT+DT DYERLDRHYQELWKDREENGPPP  G
Sbjct:  163 GAVRK-VHPGMLESEFLAATEQAN-----GG----VEGGVV-SLSLEEVPYDRDLRWCNTASDSRPRPKMDPQGGVFGRVGTAITHDTGDYERLDRHYQELWKDREENGPPPAGG 266          
BLAST of mRNA_P-littoralis_Contig140.15.1 vs. uniprot
Match: A0A7S2RK49_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RK49_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 4.250e-8
Identity = 35/92 (38.04%), Postives = 48/92 (52.17%), Query Frame = 0
Query:  177 GMLESEFLAATGEANTARVDGGXXXXAEGAVLASLSLEEVPYDRDLRWCNTASDSRPRPKVETSGGVFGKVGTAITNDTSDYERLDRHYQEL 268
            G  E+  L  T + +  R         EG   A LSL++V YDRD+RW N  SD+RPR  +      F ++  +I NDT +Y  LD HY+ L
Sbjct:   39 GAGENAVLTRTAQGSPTRWREDPEREGEGEGGAVLSLDQVSYDRDMRWFNKPSDARPRRTLGKGSRAFNQI-ESIANDTREYAALDDHYRRL 129          
BLAST of mRNA_P-littoralis_Contig140.15.1 vs. uniprot
Match: A0A6V1NUB3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NUB3_HETAK)

HSP 1 Score: 65.9 bits (159), Expect = 8.560e-8
Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = 0
Query:  208 LASLSLEEVPYDRDLRWCNTASDSRPRPKVETSGGVFGKVGTAITNDTSDYERLDRHYQEL 268
            +A LSL+EVPYDRDL+WCN AS++RPR  V     +F +V         +Y +LD HY+ L
Sbjct:   36 VAILSLDEVPYDRDLKWCNQASNARPRRTVGKGHRMFQQVADITEGAVQEYGQLDSHYRAL 96          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig140.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KDB0_9PHAE4.700e-5539.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEQ7_ECTSI2.690e-4477.39Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7S2RK49_9STRA4.250e-838.04Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A6V1NUB3_HETAK8.560e-847.54Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..546
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig140contigP-littoralis_Contig140:66840..72311 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig140.15.1mRNA_P-littoralis_Contig140.15.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig140 66561..75009 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig140.15.1 ID=prot_P-littoralis_Contig140.15.1|Name=mRNA_P-littoralis_Contig140.15.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=687bp
MSVSQARMRVSQARQESHNGTGSHPSRRRRRGGQAAATSPASARQPTTLF
QHTTSGCRTASNGGAAARGGGGGGRGGGRRTIWEENSSASASASGAAKTT
ATAATGRLNNASTAASSSPPPASGQGSKDEANKTRKGGGFGAGVRRMTVA
PAAGNGFGGGGGGGGVSGAGRKDVHPGMLESEFLAATGEANTARVDGGGG
GGAEGAVLASLSLEEVPYDRDLRWCNTASDSRPRPKVETSGGVFGKVGTA
ITNDTSDYERLDRHYQELWKDREENGPPPGRGGGGRGGRGGGRGGGGGGG
GVGRTRGGRGGPGGGGGGSSGRNPNGAPPRGGYTTAAAAAAAAAATAGRG
RGGGDSAASAKPPGGWGGRGVGNGVGSPSSGDAPGAAAVEAARGGSGRGE
RGSSAHRKRAQRSNGANKPLVGRPGGGARANGVQQPSPPANRIPQRAPAA
PSFHVQGGGTAITTARQARGGGGGGGSLPTQALNNTRGWAEGRDHQHQQE
QQQQQQQHRGGGGGGHPIATWAVEGGGLPRSAMSPSVPPPAVTSNGGGLV
GMGTPPLVPAVPSLLDHRFPPESPEYLNDLANVLSSTPLPLYAGQQQPQQ
QPPVVTPPLGPSLFGGFGGRDLFGVAGVTPKKNDNGGGGGGVTFSPYLSP
QQSKMLADPSLDVDIQDICADPDLNADAPAFVPGGY*
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