prot_P-littoralis_Contig14.218.6 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig14.218.6
Unique Nameprot_P-littoralis_Contig14.218.6
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length727
Homology
BLAST of mRNA_P-littoralis_Contig14.218.6 vs. uniprot
Match: A0A6H5KCR0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR0_9PHAE)

HSP 1 Score: 525 bits (1352), Expect = 9.970e-175
Identity = 306/501 (61.08%), Postives = 347/501 (69.26%), Query Frame = 0
Query:   24 ESCLSAVINAIGWRWGFVVFMYVWLAFLSVVQGTLIRLCCGKLRPVEENAARRAILGRLWRSLLFLNVVLAPKDIREWLFWTLWFSSSGMLMLLQTVGKEHLEHVVHNSRFGVGHTLRVLCLHALVIYLGFCLAEVGWNEFSEWGKGPLGRIILSPMPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDVGGIDN----PGVNSLQTDTERGGTGFALLLLYDLAFTGTEVGLSAVKYIANLFELHKDADSAYTEEASTEQITFFTRAGQALMNAARTLYMFKSCGHCSLARMLVIRGVTIINGVHGVRLIQRAAWRVVLAREMDVAFPDASEQELKNMASDESCAICLKTMTSAKRLECQHFFHTSCLHQYLKNTAGSNAPLCPICRAPIPWHPSAGGVKSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPLVFGAAVHRPPTPDGFSRAAREADSVVRIIRRMLRFG 520
            E CLS VI   GWRWGFV+F Y WL FL +VQG L+RLCCGKL+PVE   A  A+LG++W S LF+NVVLAP+D+REWL W LWFSS+G+L +L+TVGK H EHVV N RFGVGHTLR L LHA V+YLG  LA +GWNEF EWG GP+G+I+LSP P                                 ++ G D         S     ERGGTGFALLLLYDLA T TEVGLSA+KY+ NL ELHKD DSAYTEE   EQ  FFTR GQA++ A+RT+YMFKSCGHC+  R + IR ++ ING      I  AA R+VLAREMDVAFPDA+EQELK MA+DESCAICLKTMTSAKRLECQHFFH  CL QYL NT+    PLCPICRAPI W+P+AGG K                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  PL FG AV+ PPTPDGFSRAAR ADSVVR++R+MLR G
Sbjct:   26 EHCLSKVIETFGWRWGFVLFSYTWLVFLWIVQGALVRLCCGKLKPVERARATAAVLGKVWSSFLFVNVVLAPEDVREWLLWLLWFSSTGLLKMLETVGKGHFEHVVENPRFGVGHTLRTLGLHAAVLYLGAHLARLGWNEFFEWGGGPIGQILLSPSPAVVDGDVI-------------------------ELNGNDGYSYFGAAASTSAHPERGGTGFALLLLYDLAVTATEVGLSALKYVTNLLELHKDPDSAYTEEGCLEQTVFFTRLGQAILGASRTIYMFKSCGHCAFVRKVCIRVMSTINGGQTFNRIHSAACRLVLAREMDVAFPDATEQELKTMAADESCAICLKTMTSAKRLECQHFFHAGCLRQYL-NTSARTEPLCPICRAPISWNPTAGGNKP---------------VNRGEGDHLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLAFGPAVNGPPTPDGFSRAARGADSVVRVVRQMLRLG 485          
BLAST of mRNA_P-littoralis_Contig14.218.6 vs. uniprot
Match: D8LFG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFG6_ECTSI)

HSP 1 Score: 436 bits (1121), Expect = 2.600e-142
Identity = 221/360 (61.39%), Postives = 254/360 (70.56%), Query Frame = 0
Query:   24 ESCLSAVINAIGWRWGFVVFMYVWLAFLSVVQGTLIRLCCGKLRPVEENAARRAILGRLWRSLLFLNVVLAPKDIREWLFWTLWFSSSGMLMLLQTVGKEHLEHVVHNSRFGVGHTLRVLCLHALVIYLGFCLAEVGWNEFSEWGKGPLGRIILSPMPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDVGGIDNPG----VNSLQTDTERGGTGFALLLLYDLAFTGTEVGLSAVKYIANLFELHKDADSAYTEEASTEQITFFTRAGQALMNAARTLYMFKSCGHCSLARMLVIRGVTIINGVHGVRLIQRAAWRVVLAREMDVAFPDASEQELKNMASDESCAICLKTMTSAKR 379
            E CLS VI   GWRWGFV+F Y WL FL +VQG LIRLCCGKL+PVE   A   +LG++W S LF+NVVLAP+D+REWL W LWFSS+G+L +L+TVGKEH EHVV N RFGVGHTLR L LHA V+YLG  LA +GWNEF EWG GP+G+I+LSP P                                 ++ G D  G      S  TD ERGGTGFALLLLYDLA   TEVGLSA+KY +NL ELHKD DSAYTEE S EQ  FFTR GQA++ A+RT+YMFKSCGHC+L R + IR ++ ING      I  AA R+VLAREMDVAFPDA+EQELK MA+DESCAICLKTMTSAKR
Sbjct:   26 EHCLSKVIETFGWRWGFVLFSYSWLVFLWIVQGALIRLCCGKLKPVERARATATVLGKVWSSFLFVNVVLAPEDVREWLLWLLWFSSTGLLKMLETVGKEHFEHVVENPRFGVGHTLRTLGLHAAVLYLGAHLARLGWNEFFEWGGGPIGQILLSPSPAVVDGDVI-------------------------ELNGNDGYGYFGAAASTSTDPERGGTGFALLLLYDLAVIATEVGLSALKYTSNLLELHKDPDSAYTEEGSLEQTVFFTRLGQAILGASRTVYMFKSCGHCALVRKVCIRIMSTINGGQTFNRIHSAACRIVLAREMDVAFPDATEQELKTMAADESCAICLKTMTSAKR 360          
BLAST of mRNA_P-littoralis_Contig14.218.6 vs. uniprot
Match: A0A0H5R675_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R675_9EUKA)

HSP 1 Score: 62.4 bits (150), Expect = 2.330e-6
Identity = 45/151 (29.80%), Postives = 76/151 (50.33%), Query Frame = 0
Query:  269 KDADSAYTEEASTEQITFFTRA-GQALMNAARTLYMFKSCGHCSLARMLVIRGVTIINGVHGVRLIQRAAWRVV---LAREMDVAFPDASEQELKNMASDESCAICLKTMTSA--KRLECQHFFHTSCLHQYLKNTAGSNAPLCPICRAPI 413
            ++ DS    + S  Q TF+  + G  + N    L++        L+  ++     +I     +RL  R A  ++   + R+++  F DASEQEL+++  D+ C IC + + +   K+L C HFFH SCL Q++K         CPICR+ +
Sbjct:  202 RETDSGDVVDQS--QSTFYIESCGDIVNNGLTLLHLIHVWSLHGLSLTVIDMFFFMITRTVYIRLSSRVAALIIYRRVIRDINTRFSDASEQELRDL--DDHCTICHEPLQTGQTKKLPCSHFFHLSCLRQWMKYRR-----TCPICRSDL 343          
BLAST of mRNA_P-littoralis_Contig14.218.6 vs. uniprot
Match: A0A8B8DUC5_CRAVI (RING-type E3 ubiquitin transferase n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DUC5_CRAVI)

HSP 1 Score: 62.4 bits (150), Expect = 2.370e-6
Identity = 57/206 (27.67%), Postives = 90/206 (43.69%), Query Frame = 0
Query:  216 VGGIDNPGVNSLQTDTERGGTGFALLLLYDLAFTGTEVGLSAVKYIANLFEL-------HKDADSAYTEEASTEQITFFTRAGQALMNAARTLYMFKSCGHCSLARMLVIRGVTIINGVHGVRLIQRAAWRVVLAREMDVAFPDASEQELKNMASDESCAICLKTMTSA-KRLECQHFFHTSCLHQYLKNTAGSNAPLCPICRAPI 413
            +G +D   +N     T   G    L+  ++ A   T V ++ +KYI +  +L       +K     YTE            A   +M    T  +F           L +RG      +H V + +RA       R M++ +PDA+E+EL+   +D+ C IC ++MT+A K+L C H FHTSCL  + +         CP CR  +
Sbjct:  147 LGVLDLYFINHAYHSTLTKGASVQLVFGFEYAILMTIVAMTMMKYILHSIDLQNENPWENKAVYLLYTELFLGGVKVVLYMAFMVIMIKVHTFPLF-----AIRPMYLSMRGFK--KALHDVIMSRRAI------RNMNIFYPDATEEELQ---ADDVCIICRESMTTAAKKLPCNHIFHTSCLRSWFQRQQ-----TCPTCRRDV 331          
BLAST of mRNA_P-littoralis_Contig14.218.6 vs. uniprot
Match: K1RBU2_CRAGI (E3 ubiquitin-protein ligase synoviolin-A n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1RBU2_CRAGI)

HSP 1 Score: 60.5 bits (145), Expect = 8.550e-6
Identity = 57/206 (27.67%), Postives = 88/206 (42.72%), Query Frame = 0
Query:  216 VGGIDNPGVNSLQTDTERGGTGFALLLLYDLAFTGTEVGLSAVKYIANLFEL-------HKDADSAYTEEASTEQITFFTRAGQALMNAARTLYMFKSCGHCSLARMLVIRGVTIINGVHGVRLIQRAAWRVVLAREMDVAFPDASEQELKNMASDESCAICLKTMTSA-KRLECQHFFHTSCLHQYLKNTAGSNAPLCPICRAPI 413
            +G +D   +N     T   G    L+  ++ A   T V ++ +KYI +  +L       +K     YTE            A   +M    T  +F           L +RG      +H V + +RA       R M+  +PDA+E+EL+    D+ C IC +TMT+A K+L C H FHT+CL  + +         CP CR  +
Sbjct:   79 LGVLDLYFINHAYHSTLTKGASVQLVFGFEYAILMTIVAMTFMKYILHSIDLQNENPWENKAVYLLYTELFLGAVKVVLYMAFMVIMIKVHTFPLF-----AIRPMYLSMRGFK--KALHDVIMSRRAI------RNMNAFYPDATEEELQ---VDDVCIICRETMTTAAKKLPCNHIFHTTCLRSWFQRQQ-----TCPTCRRDV 263          
BLAST of mRNA_P-littoralis_Contig14.218.6 vs. uniprot
Match: A0A8C6ZY45_NOTPE (RING-type E3 ubiquitin transferase n=1 Tax=Nothoprocta perdicaria TaxID=30464 RepID=A0A8C6ZY45_NOTPE)

HSP 1 Score: 60.5 bits (145), Expect = 9.100e-6
Identity = 54/180 (30.00%), Postives = 79/180 (43.89%), Query Frame = 0
Query:  237 GFALLLLYDLAFTGTEVGLSAVKYIANLFELHKDA--DSAYTEEASTEQITFFTRAGQALMNAARTLYMFKSCGHCSLARMLVIRGVTIINGVHGVRLIQRAAWRVVLAREMDVAFPDASEQELKNMASDESCAICLKTM-TSAKRLECQHFFHTSCLHQYLKNTAGSNAPLCPICRAPI 413
            GF   +L  +A T       AVKY+ +  +L +D   D+       TE +T F +    L+  A    M K         +  IR + +        ++ R A      R M+  +PDA+ +EL+  A+D  C IC + M T AKRL C H FHTSCL  + +         CP CR  +
Sbjct:  168 GFEYAVLLTMALT------VAVKYVLHALDLRRDNPWDTKAVYMLYTELLTGFLKV---LLYVAFMTIMIK----VHTFPLFAIRPMYLFKKAVTDAIMSRRA-----IRNMNTLYPDATPEELQ--ATDNVCIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQ-----TCPTCRMDV 322          
BLAST of mRNA_P-littoralis_Contig14.218.6 vs. uniprot
Match: UPI000E1BD185 (E3 ubiquitin-protein ligase synoviolin n=1 Tax=Nothoprocta perdicaria TaxID=30464 RepID=UPI000E1BD185)

HSP 1 Score: 59.7 bits (143), Expect = 1.680e-5
Identity = 54/184 (29.35%), Postives = 83/184 (45.11%), Query Frame = 0
Query:  237 GFALLLLYDLAFTGTEVGLSAVKYIANLFELHKDA--DSAYTEEASTEQITFFTRAGQALMNAARTLYMFKSCGHCSLARMLVIRGVTIINGVHGVRLIQRAAWRVVLARE----MDVAFPDASEQELKNMASDESCAICLKTM-TSAKRLECQHFFHTSCLHQYLKNTAGSNAPLCPICRAPI 413
            GF   +L  +A T       AVKY+ +  +L +D   D+       TE +T F +    L+  A    M K         +  IR + +      +R  ++A    +++R     M+  +PDA+ +EL+  A+D  C IC + M T AKRL C H FHTSCL  + +         CP CR  +
Sbjct:  100 GFEYAVLLTMALT------VAVKYVLHALDLRRDNPWDTKAVYMLYTELLTGFLKV---LLYVAFMTIMIK----VHTFPLFAIRPMYL-----AMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQ--ATDNVCIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQ-----TCPTCRMDV 258          
BLAST of mRNA_P-littoralis_Contig14.218.6 vs. uniprot
Match: A0A8C6ZZE0_NOTPE (RING-type E3 ubiquitin transferase n=1 Tax=Nothoprocta perdicaria TaxID=30464 RepID=A0A8C6ZZE0_NOTPE)

HSP 1 Score: 59.3 bits (142), Expect = 1.970e-5
Identity = 49/160 (30.63%), Postives = 72/160 (45.00%), Query Frame = 0
Query:  257 AVKYIANLFELHKDA--DSAYTEEASTEQITFFTRAGQALMNAARTLYMFKSCGHCSLARMLVIRGVTIINGVHGVRLIQRAAWRVVLAREMDVAFPDASEQELKNMASDESCAICLKTM-TSAKRLECQHFFHTSCLHQYLKNTAGSNAPLCPICRAPI 413
            AVKY+ +  +L +D   D+       TE +T F +    L+  A    M K         +  IR + +        ++ R A      R M+  +PDA+ +EL+  A+D  C IC + M T AKRL C H FHTSCL  + +         CP CR  +
Sbjct:  131 AVKYVLHALDLRRDNPWDTKAVYMLYTELLTGFLKV---LLYVAFMTIMIK----VHTFPLFAIRPMYLFKKAVTDAIMSRRA-----IRNMNTLYPDATPEELQ--ATDNVCIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQ-----TCPTCRMDV 271          
BLAST of mRNA_P-littoralis_Contig14.218.6 vs. uniprot
Match: A0A8B8KCZ0_ABRPR (E3 ubiquitin protein ligase RIN2-like n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8KCZ0_ABRPR)

HSP 1 Score: 59.3 bits (142), Expect = 2.100e-5
Identity = 37/92 (40.22%), Postives = 49/92 (53.26%), Query Frame = 0
Query:  323 IINGVHG-VRLIQRAAWRVVLAREMDVAFPDASEQELKNMASDESCAICLKTMTSAKRLECQHFFHTSCLHQYLKNTAGSNAPLCPICRAPI 413
            IIN + G +RL      R+ L   +  A PDA+  EL+  A D+ CAIC + M  AK+L C H FH SCL  +L     +    CP CR P+
Sbjct:  302 IINRIKGFIRL------RIALGA-LHAALPDATTGELR--AYDDECAICREPMAKAKKLNCNHLFHLSCLRSWLDQGL-TEMYTCPTCRKPL 383          
BLAST of mRNA_P-littoralis_Contig14.218.6 vs. uniprot
Match: A0A7J8H748_ROUAE (RING-type E3 ubiquitin transferase n=1 Tax=Rousettus aegyptiacus TaxID=9407 RepID=A0A7J8H748_ROUAE)

HSP 1 Score: 57.0 bits (136), Expect = 2.330e-5
Identity = 30/71 (42.25%), Postives = 39/71 (54.93%), Query Frame = 0
Query:  344 REMDVAFPDASEQELKNMASDESCAICLKTM-TSAKRLECQHFFHTSCLHQYLKNTAGSNAPLCPICRAPI 413
            R M+  +PDA+ +EL+ M  D  C IC + M T AKRL C H FHTSCL  + +         CP CR  +
Sbjct:  126 RNMNTLYPDATPEELQAM--DNVCIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQ-----TCPTCRMDV 189          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.218.6 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCR0_9PHAE9.970e-17561.08RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LFG6_ECTSI2.600e-14261.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0H5R675_9EUKA2.330e-629.80Uncharacterized protein n=1 Tax=Spongospora subter... [more]
A0A8B8DUC5_CRAVI2.370e-627.67RING-type E3 ubiquitin transferase n=1 Tax=Crassos... [more]
K1RBU2_CRAGI8.550e-627.67E3 ubiquitin-protein ligase synoviolin-A n=2 Tax=C... [more]
A0A8C6ZY45_NOTPE9.100e-630.00RING-type E3 ubiquitin transferase n=1 Tax=Nothopr... [more]
UPI000E1BD1851.680e-529.35E3 ubiquitin-protein ligase synoviolin n=1 Tax=Not... [more]
A0A8C6ZZE0_NOTPE1.970e-530.63RING-type E3 ubiquitin transferase n=1 Tax=Nothopr... [more]
A0A8B8KCZ0_ABRPR2.100e-540.22E3 ubiquitin protein ligase RIN2-like n=1 Tax=Abru... [more]
A0A7J8H748_ROUAE2.330e-542.25RING-type E3 ubiquitin transferase n=1 Tax=Rousett... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 367..409
e-value: 3.5E-7
score: 39.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 366..410
e-value: 1.7E-8
score: 34.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 367..410
score: 12.312242
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 339..417
e-value: 6.4E-16
score: 59.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 649..726
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 420..501
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 569..583
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 668..683
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 439..484
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 547..590
NoneNo IPR availablePANTHERPTHR15067E3 UBIQUITIN-PROTEIN LIGASE RNF8coord: 38..153
NoneNo IPR availablePANTHERPTHR15067:SF5E3 UBIQUITIN-PROTEIN LIGASE AMFRcoord: 339..451
NoneNo IPR availablePANTHERPTHR15067E3 UBIQUITIN-PROTEIN LIGASE RNF8coord: 339..451
NoneNo IPR availablePANTHERPTHR15067:SF5E3 UBIQUITIN-PROTEIN LIGASE AMFRcoord: 38..153
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 361..417

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig14contigP-littoralis_Contig14:876100..890821 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig14.218.6mRNA_P-littoralis_Contig14.218.6Pylaiella littoralis U1_48mRNAP-littoralis_Contig14 876020..891471 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig14.218.6 ID=prot_P-littoralis_Contig14.218.6|Name=mRNA_P-littoralis_Contig14.218.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=727bp
MEEDEITPSGFARVAFFFRGATMESCLSAVINAIGWRWGFVVFMYVWLAF
LSVVQGTLIRLCCGKLRPVEENAARRAILGRLWRSLLFLNVVLAPKDIRE
WLFWTLWFSSSGMLMLLQTVGKEHLEHVVHNSRFGVGHTLRVLCLHALVI
YLGFCLAEVGWNEFSEWGKGPLGRIILSPMPGSGIGIGGGGDDGDDYSDG
YGGGGGGGDGDEDWDVGGIDNPGVNSLQTDTERGGTGFALLLLYDLAFTG
TEVGLSAVKYIANLFELHKDADSAYTEEASTEQITFFTRAGQALMNAART
LYMFKSCGHCSLARMLVIRGVTIINGVHGVRLIQRAAWRVVLAREMDVAF
PDASEQELKNMASDESCAICLKTMTSAKRLECQHFFHTSCLHQYLKNTAG
SNAPLCPICRAPIPWHPSAGGVKSNHHNNHHHHHHQGSGNNNPEAAAGGD
LQNHSMNTPMTTTTTATATSSNNNDDNNNNGSPLVFGAAVHRPPTPDGFS
RAAREADSVVRIIRRMLRFGWISDMGGGGGGGRGGGGVILGSGIGGAGEG
RRPPATAAVMAEAHGRESSVGGSSGSTGVSGRSAAEGHRTGAGAAAAAGA
RGAGAGSGDVDSVAWQLLEIFPDMGWDAAVEAARMAGGSAEQAVEYALAS
DSLGSPGGGGGGGGGVGGSWRQQQQQQQQKGRGGPLRQDHLTGLQRPPSR
GQGGAADGRRVSEEAPGSTLRRRWWA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD