prot_P-littoralis_Contig14.202.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig14.202.1
Unique Name	prot_P-littoralis_Contig14.202.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	267

Homology

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BLAST of mRNA_P-littoralis_Contig14.202.1 vs. uniprot
Match: D8LFH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH0_ECTSI)

HSP 1 Score: 323 bits (829), Expect = 5.480e-108
Identity = 184/261 (70.50%), Postives = 202/261 (77.39%), Query Frame = 0

Query:   17 PGGDATTNQAGFESGDGPVSSPSSLLEDPPLGEGWDENGNDLSKIANDAVRKAHCEAWVAKLRQEAAAIRAGDHPAVMRRSKLTMSASKRRTDMTERSSKRQRNIAAKLYQDEVERIHTAYDTAIVQTRERLLAEANEEIRRSKNQMEGFKEDMNRMNTRHTRGNAKGGI-EDPWLVTATGSKTNGTGKRPLCAIALTLDDDELSEDIDFLRNSEREADRDRSSGGDRGG---------GGY-GYAESGRARRPANWRRSE 266
            PGGDA           GP SSPSS+LEDPPLGEGWDE+GNDLSK AND VRK HCEAW+AKLRQEAAAIRAGDHPAVMRRSKLTM+ASKRR +MTERS+KRQR IAA LYQ EV+RIH AY+TAI QTRERLL EANEEIRRSKN MEGFKED+NRMNTRHTRGNAKG I +DPWL ++T SKTNG GKRPLCAI+L L+DD LSEDIDFLR S+R+                       GY  Y+E+GRARRP  WRR E
Sbjct:   59 PGGDADA---------GPFSSPSSVLEDPPLGEGWDEHGNDLSKAANDDVRKVHCEAWIAKLRQEAAAIRAGDHPAVMRRSKLTMNASKRRAEMTERSAKRQRKIAATLYQQEVDRIHAAYETAIEQTRERLLTEANEEIRRSKNVMEGFKEDVNRMNTRHTRGNAKGNIVDDPWLTSSTASKTNGNGKRPLCAISLVLEDDALSEDIDFLRYSDRDGGXXXXXXXXXXXXXXXXXXXXSGYTSYSENGRARRPPGWRRDE 310

[Close]

BLAST of mRNA_P-littoralis_Contig14.202.1 vs. uniprot
Match: A0A6H5KFI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI1_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 1.880e-45
Identity = 122/278 (43.88%), Postives = 133/278 (47.84%), Query Frame = 0

Query:   17 PGGDATTNQAGFESGDGPVSSPSSLLEDPPLGEGWDENGNDLSKIANDAVRKAHCEAWVAKLRQEAAAIRAGDHPAVMRRSKLTMSASKRRTDMTERSSKRQRNIAAKLYQDEVERIHTAYDTAIVQTRERLLAEANEEIRRSKNQMEGFKEDMNRMNTRHTRGNAKGGI-EDPWLVTATGSKTNGTGKRPLCAIALTLDDDELSEDIDFLRNSEREADRDRSSGGDRGG--------------------------GGY-GYAESGRARRPANWRRSE 266
            PGGDA           GP SSPSS+LEDPPLGEGWDE+GNDLSK AND                                                                               TRERLL EANEEIRRSKN MEGFKED+NRMNTRHTRGNAKG I +DPWL ++T SK NG GKRPLCAI+L L+DD LSEDIDFLR S+RE          RGG                           GY  Y+E+GRARRP  WRR E
Sbjct:  353 PGGDADA---------GPFSSPSSVLEDPPLGEGWDEHGNDLSKAAND-------------------------------------------------------------------------------TRERLLTEANEEIRRSKNLMEGFKEDVNRMNTRHTRGNAKGNIVDDPWLTSSTSSKANGNGKRPLCAISLVLEDDALSEDIDFLRYSDRE----------RGGXXXXXXXXXXXXXXXXXXXXXXXXXXSGYTSYSENGRARRPPGWRRDE 532

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig14.202.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig14.202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LFH0_ECTSI	5.480e-108	70.50	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KFI1_9PHAE	1.880e-45	43.88	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 142..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..266

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig14	contig	P-littoralis_Contig14:814886..821900 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig14.202.1	mRNA_P-littoralis_Contig14.202.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig14 814848..825765 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig14.202.1 ID=prot_P-littoralis_Contig14.202.1|Name=mRNA_P-littoralis_Contig14.202.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=267bp
MDVDKVEPEAPVVGTPPGGDATTNQAGFESGDGPVSSPSSLLEDPPLGEG
WDENGNDLSKIANDAVRKAHCEAWVAKLRQEAAAIRAGDHPAVMRRSKLT
MSASKRRTDMTERSSKRQRNIAAKLYQDEVERIHTAYDTAIVQTRERLLA
EANEEIRRSKNQMEGFKEDMNRMNTRHTRGNAKGGIEDPWLVTATGSKTN
GTGKRPLCAIALTLDDDELSEDIDFLRNSEREADRDRSSGGDRGGGGYGY
AESGRARRPANWRRSE*