prot_P-littoralis_Contig14.12.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig14.12.1
Unique Nameprot_P-littoralis_Contig14.12.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length177
Homology
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BLAST of mRNA_P-littoralis_Contig14.12.1 vs. uniprot
Match: D7G074_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G074_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 2.190e-16
Identity = 72/186 (38.71%), Postives = 94/186 (50.54%), Query Frame = 0 
Query:    3 RVTRRSGAQPDIDLWGLKDLPKTSATKNTSVRNT--YTVKVGKTVRDKDMRELRRAAKENDLAVSSSPVYVVTGAPRTPSEQAAGDLPTRGETR--------KGATAASVGCGASVRSTIQFGSMPV-INIYPSHLTEAEANQYLTG------LRREKWCSACPE--RLSHAQCTGDRSAPAMPAI 169
            R TR SG   D++LW L+DLPKTS  K     N   YTV++ +  RD+DM+ LRR A++ +    S PVY +TG      ++AA  L   GE R        K A + S  CGA  RSTI  GS+P+ + I    L EAEA+  L        L  E   S+ P   +L HAQ   D S  A  A+
Sbjct:   31 RATRNSGIGIDVNLWDLRDLPKTSTVKRAPKLNLKDYTVRLPRASRDQDMKLLRRTARDIEGVGESDPVYPLTGPACITRKEAAAALLALGEERDDAMVAAAKAAVSESGDCGAGARSTIADGSIPLAMGINQPLLAEAEADARLASPGVSRSLTTEDQRSSLPHPAQLYHAQGKPDSSDDATGAM 216
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BLAST of mRNA_P-littoralis_Contig14.12.1 vs. uniprot
Match: A0A6H5JA29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA29_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 1.610e-11
Identity = 51/146 (34.93%), Postives = 70/146 (47.95%), Query Frame = 0 
Query:    3 RVTRRSGAQPDIDLWGLKDLPKTSATKNTSVRNT---------------------YTVKVGKTVRDKDMRELRRAAKENDLAVSSSPVYVVTGAPRTPSEQAAGDLPTRGETR--------KGATAASVGCGASVRSTIQFGSMPV 119
            R TR SG   D++LW L+DLPKTS  K+ +  N                      YTV++ +  RD+DM+ LRRAA++N+    S PVY +TG      ++AA  L   GE R        + A + S  CGA   STI  G   +
Sbjct:    7 RATRNSGIAVDVNLWDLRDLPKTSTVKSAATMNNSPDPPSPRSTTHAAPKLKLKDYTVRLPRASRDQDMKLLRRAARDNEGVGGSDPVYPLTGPACITRKEAAAALLALGEERDDEMVAXXRAAASESGDCGAGAGSTIADGESSI 152
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G074_ECTSI2.190e-1638.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JA29_9PHAE1.610e-1134.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig14contigP-littoralis_Contig14:28557..30778 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig14.12.1mRNA_P-littoralis_Contig14.12.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig14 28557..35352 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig14.12.1 ID=prot_P-littoralis_Contig14.12.1|Name=mRNA_P-littoralis_Contig14.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=177bp
MGRVTRRSGAQPDIDLWGLKDLPKTSATKNTSVRNTYTVKVGKTVRDKDM
RELRRAAKENDLAVSSSPVYVVTGAPRTPSEQAAGDLPTRGETRKGATAA
SVGCGASVRSTIQFGSMPVINIYPSHLTEAEANQYLTGLRREKWCSACPE
RLSHAQCTGDRSAPAMPAIARTRGAAA
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