prot_P-littoralis_Contig14.116.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig14.116.1
Unique Nameprot_P-littoralis_Contig14.116.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length499
Homology
BLAST of mRNA_P-littoralis_Contig14.116.1 vs. uniprot
Match: A0A6H5KNA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNA0_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 3.850e-44
Identity = 211/503 (41.95%), Postives = 238/503 (47.32%), Query Frame = 0
Query:   18 GGDASADKEVMSILSSPIQQKKFVVKPQPRPGGAVAPASAVTAAAGALGPASPGANGNA-FTPRPSTXXXXXXXXXXXXXXYYRRDAVGPAXXXXXXXXXXXXDAGLXXXXXIGVADPSCSHTGLPAGPGLSPPQKTPALPKSTSASWDPQVQSSSSAFSVPTGRXXXXXXXXX-----------------------IGSLSLGGFRPLGGGDHSKDHTPLAHQVAAGEDHR----------------------------GHRNGEYGHAAERVATATAVVAAGXXXXXXXXXA--------LTGQNAPFTYAGYGSSGDANNVIGGGYDQQRGDATTSYGSNSTGAVASALGMGESGXXXXXXXXXXXDIGDPFNYSHGRLLRTSSSSAGAMG---GTARRGADEGRD----RAMGLLARQRGVSNGDTPELLRRSFDSLSLTAAAAGQQQHPSVMAAEKPPGAV-EG--VGVGSSSAIR--DNWGILKYGLTLENPVAGHG 448
            GGDASADKEVM+ILSSP+QQKKFVVKPQPRPGGA+              PASP ANGNA F P  S                 RRDA                  G XXXX IG  D     TGL A    SPPQ TP LPK +SASWDP VQSSSSAFSVP GRXXXXXXXXX                       IGS+SLGGFR +GGG   +D  PL+HQ A+G+D                              GH +G  G  AE            XXXXXXXXX         + G + P  + GYG  G           +QRGDA+ SY S S    A   G                  G+PF + H + L+  S      G     AR+GAD        R+ G L R    SNGD  EL RRSFDS     A AG  Q PS+     PPGA  EG  V  GSS+A    DNWGIL++GLTLE+PVAGHG
Sbjct:   11 GGDASADKEVMAILSSPVQQKKFVVKPQPRPGGAI--------------PASPAANGNAAFVPPASATTLGGD----------RRDATAGLPRVRCGAVEAVVGGGXXXXX-IGAVD----ATGLAA---PSPPQ-TPGLPKPSSASWDPHVQSSSSAFSVPAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXVCSAGIGSMSLGGFRSVGGGP-LQDRAPLSHQAASGDDRSSTRRQGRGGGRTPGPTRDPRYPLEDSTLGHNSGALGGGAESEGMMXXXXXXXXXXXXXXXXXXXXXXXXXIPGGHHPLAFEGYGRGGGI-------VYEQRGDAS-SYSSRSAAGCAGGSG------------------GEPFAHPHDQRLQRGSGGXXXXGVGRQAARKGADXXXXXXXXRSEGGLPRL--GSNGDMAEL-RRSFDS---GLAVAGGHQLPSMATERTPPGAAAEGNVVHGGSSTAGPPVDNWGILQFGLTLEDPVAGHG 447          
BLAST of mRNA_P-littoralis_Contig14.116.1 vs. uniprot
Match: D8LN70_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN70_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 7.720e-37
Identity = 211/563 (37.48%), Postives = 240/563 (42.63%), Query Frame = 0
Query:    1 MHPRHQQXXXXXHGGTIGGDASADKEVMSILSSPIQQKKFVVKPQPRPGGAVAPASAVTAAAGALGPASPGANGNAFTPRPSTXXXXXXXXXXXXXXYYRRDAVGPAXXXXXXXXXXXXDAGLXXXXXIGVADPSCSHTGLPAGPGLSPPQKTPALPKSTSASWDPQVQSSSSAFSVPTGRXXXXXXXXX-----------------------IGSLSLGGFRPLGGGDHSKDHTPLAHQVAAGEDHR----------------------------GHRNGEYGHAAERVA---------TATAVVAAGXXXXXXXXXALTGQNAPFTYAGYGSSGDANNVIGGGYDQQRGDATTSYGSNSTGAVASALGMGESGXXXXXXXXXXXDIGDPFNYSHGRLLRTSSSSAGAMGGTARRGADEGRDRAMGLLARQRGV-----SNGDTPELLRRSFDSLSLTAAAAGQQQHPSVMAAEKPP--GAVEGVGV--GSSSAIR--DNWGILKYGLTLENPVAGHGGGHRVDAPVEASRRQQQQLSGDEANFLGKPVRVLG-GGSDGQFS 491
            M  +HQQXX        GGDASADKEVM+ILSSP QQKKFVVKPQPRPGGA               PASP ANGNA    PS+                 RD                   G XXXXX                 GL         PK +SASWDP VQSSSSAFSVP GR        X                       IGSLSLGGFR +GGG   +D  PL+HQ A+G+D                              GH +G  G  AE            + +      XXXXXXXX    G + P  Y GYG              +QRGDA+ SYGS S                   XXXXXX  G+PF ++H + L                              R  G      SNGD   L RRSFDS    AAAAG  Q PS MA EKPP   A EG  V  GSS+A    DNWGIL+YGLTLE+PVAGHG      A  + S+RQQ+ LS ++ +  G+     G GG  GQFS
Sbjct:    1 MQEQHQQXX-------XGGDASADKEVMAILSSPAQQKKFVVKPQPRPGGAF--------------PASPAANGNAAFVPPSSVAALGSDL---------RDTTAALPGGRCGAVEAVVGGGXXXXXXXXXXXXXXXXXXXXXXXGL---------PKPSSASWDPHVQSSSSAFSVPAGRGGGGGRAEXXXXXXXXXXXXXXXXXXXVCSAGIGSLSLGGFRSVGGGPF-QDRAPLSHQAASGDDRSSTRRQGRGGGRTPGPTRGPRYPLEDSTLGHNSGALGGGAETEGMMMQSSEDFSHSXXXXXXXXXXXXXXVIPGGLHLPLAYEGYGXXXXXXXAY-----EQRGDAS-SYGSRSA------------------XXXXXXXXGEPFAHAHDQRLHRGXXXXXXXXXXQXXXXXXXXXXXXXXXXRSEGGLPRPGSNGDVTGL-RRSFDS--GLAAAAGGHQLPS-MATEKPPPGAAAEGNAVHGGSSTAGPPVDNWGILQYGLTLEDPVAGHGSDAPSAAAADGSQRQQR-LS-EKMDSAGRSTAAEGRGGGGGQFS 493          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNA0_9PHAE3.850e-4441.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN70_ECTSI7.720e-3737.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..383
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 480..499
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 447..472
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig14contigP-littoralis_Contig14:463760..465844 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig14.116.1mRNA_P-littoralis_Contig14.116.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig14 459132..465844 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig14.116.1 ID=prot_P-littoralis_Contig14.116.1|Name=mRNA_P-littoralis_Contig14.116.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=499bp
MHPRHQQQQQQQHGGTIGGDASADKEVMSILSSPIQQKKFVVKPQPRPGG
AVAPASAVTAAAGALGPASPGANGNAFTPRPSTAAAVGGGGGSGSGEYYR
RDAVGPASSSGDGGGGGAVDAGLGIGGGIGVADPSCSHTGLPAGPGLSPP
QKTPALPKSTSASWDPQVQSSSSAFSVPTGRGVGVGIGGGIGSLSLGGFR
PLGGGDHSKDHTPLAHQVAAGEDHRGHRNGEYGHAAERVATATAVVAAGV
AGGGGGAAALTGQNAPFTYAGYGSSGDANNVIGGGYDQQRGDATTSYGSN
STGAVASALGMGESGGGGGGGGGGGGDIGDPFNYSHGRLLRTSSSSAGAM
GGTARRGADEGRDRAMGLLARQRGVSNGDTPELLRRSFDSLSLTAAAAGQ
QQHPSVMAAEKPPGAVEGVGVGSSSAIRDNWGILKYGLTLENPVAGHGGG
HRVDAPVEASRRQQQQLSGDEANFLGKPVRVLGGGSDGQFSGGNAGGGS
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