prot_P-littoralis_Contig134.66.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig134.66.1
Unique Nameprot_P-littoralis_Contig134.66.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length156
Homology
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BLAST of mRNA_P-littoralis_Contig134.66.1 vs. uniprot
Match: A0A6H5L4H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H1_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 1.600e-10
Identity = 57/102 (55.88%), Postives = 68/102 (66.67%), Query Frame = 0 
Query:   55 PRPIAAALSPQATAAMQLQQYLAAHAANAXXXXXXXXXAANGNNGVVVVGSPSPAPVPRGPPAT-AALFVSSAGTA--TMTATMA-AANSAARAIVGAPRPQ 152
            PRPIA A +PQATAA+QLQQYLAAHAA+A            G  G  V G+   A +PRG PAT A+ F+S AGTA  TM A+MA AA +AAR++VG  RPQ
Sbjct:  243 PRPIAVAPTPQATAALQLQQYLAAHAAHAANAGAIVV----GGGGAPVAGA---AALPRGQPATVASSFISPAGTAAATMVASMAVAAANAARSVVGTARPQ 337
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig134.66.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L4H1_9PHAE1.600e-1055.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig134contigP-littoralis_Contig134:387896..388363 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig134.66.1mRNA_P-littoralis_Contig134.66.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig134 387896..388365 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig134.66.1 ID=prot_P-littoralis_Contig134.66.1|Name=mRNA_P-littoralis_Contig134.66.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=156bp
AAAAAAATGAVAGGGLVKTEAVAGTVGGGAPTPPLLSSIVAANGHHHHYH
HHHQPRPIAAALSPQATAAMQLQQYLAAHAANAHAANAHATNAANGNNGV
VVVGSPSPAPVPRGPPATAALFVSSAGTATMTATMAAANSAARAIVGAPR
PQTVVS
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