prot_P-littoralis_Contig134.50.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig134.50.2
Unique Nameprot_P-littoralis_Contig134.50.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1912
Homology
BLAST of mRNA_P-littoralis_Contig134.50.2 vs. uniprot
Match: A0A6H5L195_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L195_9PHAE)

HSP 1 Score: 1160 bits (3002), Expect = 0.000e+0
Identity = 918/1372 (66.91%), Postives = 962/1372 (70.12%), Query Frame = 0
Query:  574 NRSLTREARLLLLEALAGATGRALGDVVFETT--GRGLTLSPAKKMS---GKSSDXXXXXXXXXXXXXXSTAI-AQPDPAWFATLRATARRAWGGDGDVDLES----LPPHLVLQEAGGFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVDGEGALVPEFSASIAARMAQELFSEMAAGKEPGRVSSRAQASLVRANFRSSLARSRGPAPPASLSDLADRTLTSFDEAGLELALAAGQLVADKLRIKAPKKAKAARTAGAXXXXXXXXXXXANATXXXXXXXXNXXXXXXX-------------------------------------QNTSGDAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNSGRRAD-----ASRPGELGGFWASSTLLQEGLACNYTAGAEIVLETMSKDGHWPMTSTYNTLLWYFRQERDAKGALSILQGLRECNNVKPDQLSYTLAIQACVWSGSCVEEAWAVVEEAEAAE---DYSFASKDLLDARLILVQAVGGDVMGGLKEMAARGVTADESTLLGVIEACAQRGDTNGALDVLQMMRGSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYACPRPSYRSYLAALTACSRALPAAAADEGXXXXXXXXXXXXXXXVVQGGGSGSGSGSGMVRGDWRASKEILRMMWEDEEARVAK--------------------------GDIAVPGTWSPGLQEALSLGPSHVTMPAVPDAACYQLAMECCVSRGRVDEALALLAEMEDRGLSPNEAALRALIRGFALEGLGDSEGXXXXXXXXXXXXXEQAARRWKGVENALGVFEELAERFDPPSRASFEQAIDACVSHPDGLQHAGDLISRMKAVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGAKSRTLGWEVEEDMFAALVGACTRSGEAENLSEAIGFLRMNGVNPPSEILSYLQNDEFESELYDEIFGEKDRAAGKAKDQRSRGRKYGTLALA-HLIGSGGAGXXXXXXXEG-----EDTEEVGPGGGKQGVASRGGRSDGSASLGGGREGARGGGKKGKDGAKLREEQTFAEAVLDILRRAEDRRTKSEQVEEDGGAFPGNPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRQEAERLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNGVGAIPKSIDKPKGGFDGAAEGSGGDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFSEEPSPALEAVVAGLRRKGSNSKWRSRRGSGMSIVPSQPSLRRKEKNGG 1858
            NR LTREARL LLEALA ATGRALG+VVFET   GRGLTL+P  K+         XXXXXXXXXXXX  +TAI AQPDPAWF TLRATARRAW G G  D +      PP LV  EAGGFG                            AEVDGEGALVP F A IAARMAQELFSEMAAGKE GRVSSRAQASLVRA FRS+LA SRG APPASLS+LADRTLTSFDE  LELAL AGQL AD+L+IK PK   A+     XXXXXXXXXXX    XXXXXXXX XXXXXXX                                     +  S D  K              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        + +     ASR GE+G FWA+STLLQE LACNYTAGAEIVL TMSK+G W  TSTYNTLLWYFRQERDAKGALS+LQ LRE  NVKPDQ SYTLAIQACVWSGS VEEAWA+VEEA+AA    DYSFASKDLLDARL LVQAVGGDV+ GL+EM+ RGVTADEST+LGVIEACAQRGD  GALD+LQMMRG+  XXXXXXXXXXXXXXXXXX                       CPRPSYRSYLAA                  XXXXXXXXXXXXX      SG G     VRGDWRA+KE+LRMMWEDE AR                             G +A  GTWS  LQEAL LGPSHVTMPAVPDAACYQLAMECCVS GR DEALALL+EME RGLSPNEAALRALIRGFALEG+    G             E+A RRW+GVENALGVFEELAERFDPPSRASFEQAIDACVSHPDGLQHAGDLISRMK+VGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGA+SRTLGWEVEEDMFAALVGACTRSGEAEN+SEAIGFLRMNGVNPPSEILSYLQN+EFESELYDEIFGEKDR AGKAK+QRSRGRKYGT ALA HLI   G G   XXXX       ED+ EV          S   R              R GG       K REEQTFAEA   ILRRAE+RR K E+VEEDGGAF  NPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKR+EAERLAAXXXXXXXXXXXXXXXXXXX           S    AIP+SIDKPKGGFD AAE      XXXXX     XXXXXXXXXXXXXXXXXXXXXX                       GS SEEPSP LEAVVAGLRRKGSNSK RSRRGSG+S VPSQP +RRK   GG
Sbjct:   15 NRGLTREARLRLLEALAVATGRALGNVVFETAAAGRGLTLAPLSKIKQXXXXXXXXXXXXXXXXXXXASATAIVAQPDPAWFETLRATARRAWSGGGGCDADGNDLEAPPRLV-PEAGGFGCGNGGGGWVPVGARAAGTGR--------AEVDGEGALVPAFDARIAARMAQELFSEMAAGKEAGRVSSRAQASLVRAKFRSTLALSRGAAPPASLSELADRTLTSFDETDLELALQAGQLTADQLKIKNPKTTPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNVRGKERGSADVGKNKTKGREGPSSPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATSGQKEEKVERKAGPASRAGEMGRFWAASTLLQESLACNYTAGAEIVLHTMSKEGLWATTSTYNTLLWYFRQERDAKGALSMLQSLRESENVKPDQSSYTLAIQACVWSGSRVEEAWAIVEEAQAAATGGDYSFASKDLLDARLALVQAVGGDVLHGLREMSERGVTADESTMLGVIEACAQRGDAAGALDILQMMRGAXXXXXXXXXXXXXXXXXXXXATA-------------------VCPRPSYRSYLAAXX----------------XXXXXXXXXXXXXXXXXXXSGDG-----VRGDWRAAKEVLRMMWEDEAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGLAWCGTWSTELQEALRLGPSHVTMPAVPDAACYQLAMECCVSGGRNDEALALLSEMEGRGLSPNEAALRALIRGFALEGVVADGGGGGPAAER-----ERAERRWRGVENALGVFEELAERFDPPSRASFEQAIDACVSHPDGLQHAGDLISRMKSVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGARSRTLGWEVEEDMFAALVGACTRSGEAENVSEAIGFLRMNGVNPPSEILSYLQNEEFESELYDEIFGEKDRLAGKAKEQRSRGRKYGTHALAAHLIRGSGGGMVSXXXXXXXXXXXEDSGEVXXXXXXXXXXSASAR--------------RVGGNGAAGSIKNREEQTFAEAARGILRRAEERRMKVERVEEDGGAFSANPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRREAERLAAXXXXXXXXXXXXXXXXXXXSG---------SAKTVAIPRSIDKPKGGFDAAAESXXXXXXXXXXRVGALXXXXXXXXXXXXXXXXXXXXXXGSRLEPRRKPVLVKTGGGGSGVQGSLSEEPSPVLEAVVAGLRRKGSNSKGRSRRGSGLSAVPSQPLVRRKGNGGG 1309          
BLAST of mRNA_P-littoralis_Contig134.50.2 vs. uniprot
Match: D8LKT0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT0_ECTSI)

HSP 1 Score: 1053 bits (2724), Expect = 0.000e+0
Identity = 789/1191 (66.25%), Postives = 828/1191 (69.52%), Query Frame = 0
Query:  733 MAQELFSEMAAGKEPG-------------RVSSRAQASLVRANFRSSLARSRGPAPPASLSDLADRTLTSFDEAGLELALAAGQLVADKLRIKAPKKAKAARTAGAXXXXXXXXXXXANATXXXXXXXXNXXXXXXX--------------------------------------------QNTSGDAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNSGR----RADASRPGELGGFWASSTLLQEGLACNYTAGAEIVLETMSKDGHWPMTSTYNTLLWYFRQERDAKGALSILQGLRECNNVKPDQLSYTLAIQACVWSGSCVEEAWAVVEEAEAAE---DYSFASKDLLDARLILVQAVGGDVMGGLKEMAARGVTADESTLLGVIEACAQRGDTNGALDVLQMMRGSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYACPRPSYRSYLAALTACSRALPAAAADEGXXXXXXXXXXXXXXXVVQGGGSGSGSGSGMVRGDWRASKEILRMMWEDEEARVAKGDIAVPGTWSPGLQEALSLGPSHVTMPAVPDAACYQLAMECCVSRGRVDEALALLAEMEDRGLSPNEAALRALIRGFALEGLGDSEGXXXXXXXXXXXXXEQAARRWKGVENALGVFEELAERFDPPSRASFEQAIDACVSHPDGLQHAGDLISRMKAVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGAKSRTLGWEVEEDMFAALVGACTRSGEAENLSEAIGFLRMNGVNPPSEILSYLQNDEFESELYDEIFGEKDRAAGKAKDQRSRGRKYGTLALA-HLIGSGGAGXXXXXXXEGEDTEEVGPGGGKQGVASRGGRSDGSASLGGGREGARGGGKKGKDGAKLREEQTFAEAVLDILRRAEDRRTKSEQVEEDGGAFPGNPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRQEAERLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNGVGAIPKSIDKPKGGFDGAAEGSGGDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFSEEPSPALEAVVAGLRRKGSNSKWRSRRGSGMSIVPSQPSLRRKEKNGG 1858
            MAQELFSEMAAGKE G             RVSSRAQASLVRA FRS+LARSRG APPASLSDLADRTLTSFDE  LELAL AGQL AD+L+IK P    A+ +   XXXXXXXXXXX    XXXXXXXX XXXXXXX                                            +  S D  K                  XXXXXXXXXXXXXXXX XXXXXXXX                         +     A ASR GE+G FWA+STLLQE LACNYTAGAEIVL+TMS +G W  TSTYNT LWYFRQERDAKGALS+LQ LRE  NVKPDQ SYTLAIQACVWSGS VEEAWA+VEEAEA     D SFASKDLLDARL+LVQAVGGDV+ GLKEM+ RGVTADEST+LGVIEACAQRGD  GALD+LQMMRG+  XXXXXXXXXXXXXXX                          CPRPSYRSYLAAL                    XXXXXXXXXX      SG G     VRGDWRA+KE+LRMMWEDE AR AKGD+AVPGTWS  LQEALSLGPSHVTMPAVPDAACYQLAMECCVS GR DEAL LL+EME RGLSPNEAALRALIRGFALEG+    G             E+A RRW+GVENALGVFEELAERFDPPSRASFEQAIDACVSHPDGLQHAGDLISRMK+VGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGA+SRTLGWEVEEDMFAALVGACTRSGEAEN+SEAIGFLRMNGVNPPSEILSYLQN+EFESELYDEIFGEKDR AGKAK+QRSRGRKYGT ALA HLIG  G  XXXXXXX                                                      TFAEAV DILRRAE+RR + E+VEEDGGAFP NPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKR+EAERLAAXXXXXXXXXXXXXXXXXXXXXXXXX          AIPKSIDKPKGGFD AAE +GGD              XXXXXXXXXXXXXXXXXXX                       GS SEEPSP LEAVVAGLRRKGSNSK RSRRGSG+S VPSQP ++RKE  GG
Sbjct:    1 MAQELFSEMAAGKEAGSRQPTSPRRFAPVRVSSRAQASLVRAKFRSTLARSRGAAPPASLSDLADRTLTSFDETDLELALQAGQLTADQLKIKNPTTTPASASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNARGKERGSADVGKNKTKGGRGQPSPAAAKGGXXXXXXXXXXXXXXXXTXXXXXXXXASGKEKLQRGGSGDAETATGGQKKEKVERKAAPASRAGEMGRFWAASTLLQESLACNYTAGAEIVLDTMSNEGLWATTSTYNTFLWYFRQERDAKGALSMLQSLRESENVKPDQSSYTLAIQACVWSGSRVEEAWAIVEEAEAVATGGDSSFASKDLLDARLVLVQAVGGDVLQGLKEMSERGVTADESTMLGVIEACAQRGDAAGALDILQMMRGAXXXXXXXXXXXXXXXXXTTA----------------------VCPRPSYRSYLAALX-------------------XXXXXXXXXXXXXXXXSGDG-----VRGDWRAAKEVLRMMWEDEAARAAKGDVAVPGTWSTELQEALSLGPSHVTMPAVPDAACYQLAMECCVSGGRNDEALGLLSEMEGRGLSPNEAALRALIRGFALEGVVADGGGGGPAADR-----ERAERRWRGVENALGVFEELAERFDPPSRASFEQAIDACVSHPDGLQHAGDLISRMKSVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGARSRTLGWEVEEDMFAALVGACTRSGEAENVSEAIGFLRMNGVNPPSEILSYLQNEEFESELYDEIFGEKDRLAGKAKEQRSRGRKYGTHALAAHLIGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXTFAEAVRDILRRAEERRKRVERVEEDGGAFPANPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRREAERLAAXXXXXXXXXXXXXXXXXXXXXXXXXAKTV------AIPKSIDKPKGGFDAAAESAGGDGARRRGRVGALSAHXXXXXXXXXXXXXXXXXXXGSRLEPRRKPVLVKTGGGGSGVQGSLSEEPSPVLEAVVAGLRRKGSNSKGRSRRGSGLSAVPSQPMVKRKENGGG 1125          
BLAST of mRNA_P-littoralis_Contig134.50.2 vs. uniprot
Match: A0A6H5KDS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDS3_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 3.160e-56
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0
Query: 1373 RASFEQAIDACVSHPDGLQHAGDLISRMKAVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGAKSRTLGWEVEEDMFAALVGACTR 1471
            RASFEQAIDACVSHPDGLQHAGDLISRMK+VGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGA+SRTLGWEVEEDMFAALVGACTR
Sbjct:    9 RASFEQAIDACVSHPDGLQHAGDLISRMKSVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGARSRTLGWEVEEDMFAALVGACTR 107          
BLAST of mRNA_P-littoralis_Contig134.50.2 vs. uniprot
Match: A0A6H5L1W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1W2_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 2.560e-55
Identity = 136/192 (70.83%), Postives = 141/192 (73.44%), Query Frame = 0
Query:  387 HDE--VDPGTVAAEEFAELAARCLGSALPEIALEA---FSLYNRAAASGLQPHTKPLLPPFPLTTDDADDGVGDDHSISDASSRQRRDAEISLLVTAARAHIAMGGVLDGLALIDDATGIGGXXXXXXXXXXXXXXXALRASGRWGGDGEAGAGLARLGDGDASAVAEELCVSGGSVGLRAALRLRERLAEE 573
            HD   V    VAAEEFAELAARCLGSALPEIALEA    SLY RA ASGLQP T  LLP +PLTTDD D    DD        R+R DAE+SLLVTAARAHIAMGGVLDG+ALIDDAT IGG               ALRA+GRWGGDG AGAGLARLGDGDAS VAEELCVSGG  GLRAALRLRERLAEE
Sbjct:  362 HDSTAVAAAAVAAEEFAELAARCLGSALPEIALEASVAHSLYVRAEASGLQPRTTALLPEYPLTTDDVDTQDDDD-----GHWRRRWDAEVSLLVTAARAHIAMGGVLDGIALIDDATAIGGDGASAAA--------ALRAAGRWGGDGVAGAGLARLGDGDASTVAEELCVSGGDTGLRAALRLRERLAEE 540          
BLAST of mRNA_P-littoralis_Contig134.50.2 vs. uniprot
Match: A0A7S0BNT0_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BNT0_9RHOD)

HSP 1 Score: 74.3 bits (181), Expect = 7.820e-10
Identity = 39/148 (26.35%), Postives = 73/148 (49.32%), Query Frame = 0
Query: 1372 SRASFEQAIDACVSHPDGLQHAGDLISRMKAVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGAKSRTLGWEVEEDMFAALVGACTRSGEAENLSEAIGFLRMNGVNPPSEILSYLQNDEF----ESELYDEIFG 1515
            +R ++ + +DAC+ HP G+ HA   +  M A+G  +  ++Y+ L++G+G AR L   +  F+ +                  G EV E  F A++ AC          EAI  +  +G+ P  +++ YLQN +     ++++  ++FG
Sbjct:  234 NRTAYRRMVDACLKHPQGIAHACTTLEEMTAMGFSMDNEYYDTLLKGYGRARELEKVVARFRNVNR---------------PGPEVGEVTFGAVLNACNNEESLPTADEAIDRMVSSGIRPTRQMMDYLQNGKSVAKSKNKIMQDVFG 366          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig134.50.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L195_9PHAE0.000e+066.91Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LKT0_ECTSI0.000e+066.25Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KDS3_9PHAE3.160e-5697.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1W2_9PHAE2.560e-5570.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0BNT0_9RHOD7.820e-1026.35Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1665..1685
NoneNo IPR availableCOILSCoilCoilcoord: 560..587
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 450..464
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1594..1609
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1548..1609
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 828..867
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 438..464
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1666..1911
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1702..1728
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 822..880
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1626..1650
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..394
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1666..1688
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 905..942
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1197..1217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..324
NoneNo IPR availablePANTHERPTHR47933PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIALcoord: 964..1489
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 947..1154
e-value: 4.6E-16
score: 61.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1338..1541
e-value: 5.3E-18
score: 67.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1219..1332
e-value: 2.0E-10
score: 42.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 1411..1437
e-value: 0.044
score: 14.0
coord: 1281..1307
e-value: 0.014
score: 15.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 1278..1311
e-value: 2.1E-6
score: 25.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1275..1309
score: 11.246351

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig134contigP-littoralis_Contig134:273956..295843 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig134.50.2mRNA_P-littoralis_Contig134.50.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig134 273680..296705 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig134.50.2 ID=prot_P-littoralis_Contig134.50.2|Name=mRNA_P-littoralis_Contig134.50.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1912bp
MRALATTLVLGTATTVFLLIGTATIVDGMRPSSGGPQRHHRQALVSWRGS
SASPSLSSLSPLSSAFVGRRQKNDDCSRETLLPSQSSSPSSSSSGETAAP
RTRKIFAMKASSAAVTAQELPEIRSSGRRGGGGGEGVAGVVQKAAAGAAA
AVTATTSTTPTPQRKRRRRRKQQRRLKPVSRPDAVELLREAVIKFRGAQV
SASSYSSPSSSSSSSSTSSSPPSPSLPPRSSSSSSSSSSSSTASSYPSSS
GGAKLYASSSGGVVVGAGVSTTTTTTSTTTTSTSSGGTKYYASSSDGVVV
GAGLGTSTGASTGRSGGAERVSSTVVAAPSSSSSAVRSAIVGGGSGSSSS
NSSSSGNDGGKSGGSGSAVTAAAVPVPEAAAVPSEKHDEVDPGTVAAEEF
AELAARCLGSALPEIALEAFSLYNRAAASGLQPHTKPLLPPFPLTTDDAD
DGVGDDHSISDASSRQRRDAEISLLVTAARAHIAMGGVLDGLALIDDATG
IGGGGRGGGGGAAAAAAAALRASGRWGGDGEAGAGLARLGDGDASAVAEE
LCVSGGSVGLRAALRLRERLAEENRSLTREARLLLLEALAGATGRALGDV
VFETTGRGLTLSPAKKMSGKSSDSSTTSDTAAAAAAASTAIAQPDPAWFA
TLRATARRAWGGDGDVDLESLPPHLVLQEAGGFGIGIGDGGGGGGGGWVP
IGARAAAAGAGRAEVDGEGALVPEFSASIAARMAQELFSEMAAGKEPGRV
SSRAQASLVRANFRSSLARSRGPAPPASLSDLADRTLTSFDEAGLELALA
AGQLVADKLRIKAPKKAKAARTAGAVATTKKTKKTKANATTATTTTRTNN
NKSSGSQNTSGDAEKSSKSSGGGGGGCGGVSSSGGGKTSLATAAADTAAV
GAKNKKAAEGGGNSNKNKKKQNKNNDTDQNNSGRRADASRPGELGGFWAS
STLLQEGLACNYTAGAEIVLETMSKDGHWPMTSTYNTLLWYFRQERDAKG
ALSILQGLRECNNVKPDQLSYTLAIQACVWSGSCVEEAWAVVEEAEAAED
YSFASKDLLDARLILVQAVGGDVMGGLKEMAARGVTADESTLLGVIEACA
QRGDTNGALDVLQMMRGSAAAAGASASASGFAAADLSTASPKHKREKNAA
AAAAAAAAAYACPRPSYRSYLAALTACSRALPAAAADEGGGSVGGDAAEA
GGGGVVQGGGSGSGSGSGMVRGDWRASKEILRMMWEDEEARVAKGDIAVP
GTWSPGLQEALSLGPSHVTMPAVPDAACYQLAMECCVSRGRVDEALALLA
EMEDRGLSPNEAALRALIRGFALEGLGDSEGGGGGGGAAGATAAEQAARR
WKGVENALGVFEELAERFDPPSRASFEQAIDACVSHPDGLQHAGDLISRM
KAVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGAKS
RTLGWEVEEDMFAALVGACTRSGEAENLSEAIGFLRMNGVNPPSEILSYL
QNDEFESELYDEIFGEKDRAAGKAKDQRSRGRKYGTLALAHLIGSGGAGG
GARGGAEGEDTEEVGPGGGKQGVASRGGRSDGSASLGGGREGARGGGKKG
KDGAKLREEQTFAEAVLDILRRAEDRRTKSEQVEEDGGAFPGNPRHPVGW
VGTFTETFTHAERKEEALKRRAGEARSRERRLKRQEAERLAAVAAAGGGG
GGTTATSATTTAVGPSGTTSSSSNGVGAIPKSIDKPKGGFDGAAEGSGGD
RRTGGALSAHRRRRGGGGGKGDSRAAAAAAAAAGGARKSEPRRRPLLVKT
GGGGSSGSFSEEPSPALEAVVAGLRRKGSNSKWRSRRGSGMSIVPSQPSL
RRKEKNGGGVGASGASASGGGGGGGGSKAKAGGKSKGKVGGGDGSGGGGV
GEGEGGPRAKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat