prot_P-littoralis_Contig1322.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1322.3.1
Unique Nameprot_P-littoralis_Contig1322.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length130
Homology
BLAST of mRNA_P-littoralis_Contig1322.3.1 vs. uniprot
Match: A0A6H5KVG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVG7_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 5.330e-55
Identity = 93/131 (70.99%), Postives = 110/131 (83.97%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQ---PNSSADSEYIAAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLSSSRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 129
            +GG  VSH S +Q     S+ ++EYIAAGEGV+EALFVR VLSF+APETS ++I+V EDN+GAM L+QNPLSS+RSKHIDVRFHFIRELF+SG ISVE+V T+EQHAD+LTKAL R    YHRKALMNLPE
Sbjct:    8 LGGTAVSHTSKSQRVVALSTTEAEYIAAGEGVKEALFVRAVLSFVAPETSWASIQVREDNQGAMTLVQNPLSSARSKHIDVRFHFIRELFKSGRISVEYVSTDEQHADLLTKALCRVKLEYHRKALMNLPE 138          
BLAST of mRNA_P-littoralis_Contig1322.3.1 vs. uniprot
Match: A0A6H5KR64_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR64_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 1.350e-54
Identity = 92/130 (70.77%), Postives = 108/130 (83.08%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQP---NSSADSEYIAAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLSSSRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLP 128
            VGG VV   + TQP    S+ ++EYIAAGEGV+EALFVR VLSFIAPETSG+TI+V EDNEGA+AL+QNP SS+RSKHIDVRFHFIRELF++G I+ ++V TEEQHAD+LTK L R    YHRKALMNLP
Sbjct:   82 VGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVLSFIAPETSGATIRVREDNEGALALVQNPFSSARSKHIDVRFHFIRELFKAGKITADYVSTEEQHADMLTKVLGRGKLEYHRKALMNLP 211          
BLAST of mRNA_P-littoralis_Contig1322.3.1 vs. uniprot
Match: A0A6H5KJM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM0_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 4.970e-54
Identity = 97/131 (74.05%), Postives = 108/131 (82.44%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPN---SSADSEYIAAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLSSSRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 129
            VGG VVSH S TQ     SS ++EYIA GEGV+ ALFVR VLSFIAPETSGS+I+VLEDN+GA+AL+QNPLSS R+KHIDVRFHFIR LFRSG ISV  V T EQHADVLTKALSR   +YHR+ LMNLPE
Sbjct:  102 VGGTVVSHGSKTQSIVSLSSTEAEYIATGEGVKGALFVRAVLSFIAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRFHFIRGLFRSGNISVNFVPTTEQHADVLTKALSRASLQYHRRKLMNLPE 232          
BLAST of mRNA_P-littoralis_Contig1322.3.1 vs. uniprot
Match: A0A6H5L589_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L589_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 8.940e-54
Identity = 96/131 (73.28%), Postives = 111/131 (84.73%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPN---SSADSEYIAAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLSSSRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 129
            VGG V+SH S TQ     SS ++EYIAAGEGV+EALFVR VLSFIAPETSGS+I+VLEDN+GAMAL+QNPLSS+RSKHIDVR+HFIR LFRSG IS++ V T EQHADVLTKA S+   +YHR+ LMNLPE
Sbjct:  251 VGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGEISIKFVSTSEQHADVLTKAHSKSSLQYHRRKLMNLPE 381          
BLAST of mRNA_P-littoralis_Contig1322.3.1 vs. uniprot
Match: A0A6H5KGI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGI0_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 1.120e-52
Identity = 96/131 (73.28%), Postives = 110/131 (83.97%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPN---SSADSEYIAAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLSSSRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 129
            VGG VVSH S TQ     SS ++EYIAAGEGV+EALFVR VLSF+APETSGS+IKVLEDN+GA+AL+QNPLSS R+KHIDVR+HFI  LFRSG ISV+ V T EQHAD+LTKALSR   +YHR+ LMNLPE
Sbjct:  256 VGGTVVSHGSKTQSILSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIHGLFRSGDISVKFVPTTEQHADLLTKALSRANLQYHRRKLMNLPE 386          
BLAST of mRNA_P-littoralis_Contig1322.3.1 vs. uniprot
Match: A0A6H5L267_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L267_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 2.110e-52
Identity = 92/131 (70.23%), Postives = 110/131 (83.97%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPN---SSADSEYIAAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLSSSRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 129
            VGG VVSH S TQ     SS ++EYIAAGEGV+EALFVR VLSF+APETSGS+I+VLEDN+GA+AL+QNPLSS R+KHIDVR+HFIR LF SG I+V+ V T+EQHAD+LTKALSR   +YHR+ L+N PE
Sbjct:   97 VGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFGSGDIAVKFVPTKEQHADLLTKALSRASLQYHRRKLINFPE 227          
BLAST of mRNA_P-littoralis_Contig1322.3.1 vs. uniprot
Match: A0A6H5KGX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGX6_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 2.210e-52
Identity = 96/131 (73.28%), Postives = 112/131 (85.50%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPN---SSADSEYIAAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLSSSRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 129
            VGG V+SH S TQ     SS ++EYIAAGEGV+EALFVR VLSFIAPETSGS+I+VLEDN+GAMAL+QNPLSS+RSKHIDVR+HFIR LFRSG IS++ V T EQHAD+LTKALS+   +YHR+ LMNLPE
Sbjct:  466 VGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYHRRKLMNLPE 596          
BLAST of mRNA_P-littoralis_Contig1322.3.1 vs. uniprot
Match: A0A6H5K9K6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K6_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 3.100e-52
Identity = 93/130 (71.54%), Postives = 110/130 (84.62%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQ---PNSSADSEYIAAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLSSSRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLP 128
            VGG VVSH S TQ     S++++EYIAAGEGV+EALFVR VLSFIAPETSG+ IKVLEDN+GA++L+QNP SS+RSKHIDVRFHFIRELF+SG ISVE++ T+EQHAD+LTKAL R     HR ALMN+P
Sbjct:  241 VGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNIP 370          
BLAST of mRNA_P-littoralis_Contig1322.3.1 vs. uniprot
Match: A0A6H5KCR8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR8_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 3.170e-52
Identity = 89/130 (68.46%), Postives = 106/130 (81.54%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQP---NSSADSEYIAAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLSSSRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLP 128
            VGG VV   + TQP    S+ ++EYIAAGEGV+EALFVR VLSFIAPETSG+TI+V EDNEGA+AL+QNP SS+RSKHIDVRF FIREL ++G I+ +++ TEEQHAD+LTK L R    YHRKALMNLP
Sbjct:   55 VGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVLSFIAPETSGATIRVREDNEGALALVQNPFSSTRSKHIDVRFPFIRELVKAGKITADYISTEEQHADMLTKVLGRGKLEYHRKALMNLP 184          
BLAST of mRNA_P-littoralis_Contig1322.3.1 vs. uniprot
Match: A0A6H5KCN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN6_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 4.180e-52
Identity = 92/129 (71.32%), Postives = 108/129 (83.72%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQP---NSSADSEYIAAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLSSSRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNL 127
            VGG VV   + TQP    S+ ++EYIAAGEGV+EALFVR VLSFIAPETSG+TI+VLEDNEGA+AL+QNP SS+RSKHIDVRFHFIRELF++G I+ ++V TEEQHAD+LTK L R    YHRKALMNL
Sbjct:  283 VGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVLSFIAPETSGATIRVLEDNEGALALVQNPFSSARSKHIDVRFHFIRELFKAGKITADYVSTEEQHADMLTKVLGRGKLEYHRKALMNL 411          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1322.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVG7_9PHAE5.330e-5570.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KR64_9PHAE1.350e-5470.77Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJM0_9PHAE4.970e-5474.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L589_9PHAE8.940e-5473.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGI0_9PHAE1.120e-5273.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L267_9PHAE2.110e-5270.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGX6_9PHAE2.210e-5273.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9K6_9PHAE3.100e-5271.54Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KCR8_9PHAE3.170e-5268.46Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCN6_9PHAE4.180e-5271.32Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR11439:SF343SUBFAMILY NOT NAMEDcoord: 52..124
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 52..124
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1..115
e-value: 4.71465E-42
score: 133.748

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1322contigP-littoralis_Contig1322:24775..25164 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1322.3.1mRNA_P-littoralis_Contig1322.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1322 24711..25200 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1322.3.1 ID=prot_P-littoralis_Contig1322.3.1|Name=mRNA_P-littoralis_Contig1322.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=130bp
MVGGAVVSHKSSTQPNSSADSEYIAAGEGVREALFVRHVLSFIAPETSGS
TIKVLEDNEGAMALIQNPLSSSRSKHIDVRFHFIRELFRSGVISVEHVRT
EEQHADVLTKALSRDLFRYHRKALMNLPE*
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