prot_P-littoralis_Contig1301.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1301.1.1
Unique Nameprot_P-littoralis_Contig1301.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length370
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig1301.1.1 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 2.830e-5
Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 0 
Query:  147 CTKQPRYGVAGTKTAEFCSGHAKDGMVDVLSKRC 180
            CTK+P YGVAG+K  EFCS HA+DGMV+V +KRC
Sbjct:    9 CTKRPTYGVAGSKKREFCSQHARDGMVNVNNKRC 42
[Close]
BLAST of mRNA_P-littoralis_Contig1301.1.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 3.630e-5
Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 0 
Query:  147 CTKQPRYGVAGTKTAEFCSGHAKDGMVDVLSKRC 180
            CTK+P YGVAG+K  EFCS HA+DGMV+V +KRC
Sbjct:   69 CTKRPTYGVAGSKKREFCSQHARDGMVNVNNKRC 102
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1301.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FI73_ECTSI2.830e-570.59EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JT00_9PHAE3.630e-570.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.140.110coord: 156..218
e-value: 1.9E-14
score: 55.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..293
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 180..213
e-value: 1.2E-8
score: 35.3
coord: 143..175
e-value: 2.8E-9
score: 37.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1301contigP-littoralis_Contig1301:1194..2532 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1301.1.1mRNA_P-littoralis_Contig1301.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1301 1194..2532 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1301.1.1 ID=prot_P-littoralis_Contig1301.1.1|Name=mRNA_P-littoralis_Contig1301.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=370bp
PEVWRGRYQDGGVLLWTRQGWNGGRPPQAVCPLHQEAEVWRGRYENGGVL
LWTRQGWNGERPQKAVCPPRLHQEAEVWRGRYEDGGVLLWTRQGWNGGRL
PQAVCPPRLHQEAEVWCGRYEDGGVLLWTRHGWNGGRPQQAVCPPLCTKQ
PRYGVAGTKTAEFCSGHAKDGMVDVLSKRCAHLGCTKRPSYGVAGTQTAE
FCSGHAKDGMVRVSDSRNPCSVRGRSGGARGCGGAEMDGCTARRSGAGGK
KRRRSLADTRQAEPSSESSSRSGRADSKRSRQATVNTPVSPPPSIGGTAE
YETHAAPDANVSLPEPDDAAVKTEVATVSSKAVAIEALPAVETTAGESAT
SVGYNLCAEPDGSVKTEVGI
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys