prot_P-littoralis_Contig1300.9.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1300.9.1
Unique Nameprot_P-littoralis_Contig1300.9.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length155
Homology
BLAST of mRNA_P-littoralis_Contig1300.9.1 vs. uniprot
Match: A0A6H5KIP6_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIP6_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 5.590e-11
Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    1 MYHQEDLPPPAGAQMGVVYQCGRCGRLGHTPLICSAPRRFDGNCTSCHQYGHTSRDCVT 59
            +Y QE+   P GA +GVV+QC RCGR GH+   C+APRRF+GNCT+     H  R C T
Sbjct:  334 VYPQEESASPQGALIGVVHQCVRCGRHGHSLGDCNAPRRFEGNCTAXXXXXHRRRMCCT 392          
BLAST of mRNA_P-littoralis_Contig1300.9.1 vs. uniprot
Match: A0A6H5L4A7_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A7_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 5.690e-11
Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    1 MYHQEDLPPPAGAQMGVVYQCGRCGRLGHTPLICSAPRRFDGNCTSCHQYGHTSRDCVT 59
            +Y QE+   P GA +GVV+QC RCGR GH+   C+APRRF+GNCT+     H  R C T
Sbjct:  334 VYPQEESASPQGALIGVVHQCVRCGRHGHSLGDCNAPRRFEGNCTAXXXXXHRRRMCCT 392          
BLAST of mRNA_P-littoralis_Contig1300.9.1 vs. uniprot
Match: A0A6H5KYI1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYI1_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 5.800e-11
Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    1 MYHQEDLPPPAGAQMGVVYQCGRCGRLGHTPLICSAPRRFDGNCTSCHQYGHTSRDCVT 59
            +Y QE+   P GA +GVV+QC RCGR GH+   C+APRRF+GNCT+     H  R C T
Sbjct:  334 VYPQEESASPQGALIGVVHQCVRCGRHGHSLGDCNAPRRFEGNCTAXXXXXHRRRMCCT 392          
BLAST of mRNA_P-littoralis_Contig1300.9.1 vs. uniprot
Match: A0A6H5JBS7_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS7_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 9.550e-8
Identity = 24/42 (57.14%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    1 MYHQEDLPPPAGAQMGVVYQCGRCGRLGHTPLICSAPRRFDG 42
            +YHQ +  PP GA MG V++CGRCGR  H  + C+APRRF+G
Sbjct:  375 VYHQPESLPPPGAPMGTVHRCGRCGRNDHHAIDCAAPRRFEG 416          
BLAST of mRNA_P-littoralis_Contig1300.9.1 vs. uniprot
Match: A0A6H5KYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB5_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 1.360e-7
Identity = 24/42 (57.14%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    1 MYHQEDLPPPAGAQMGVVYQCGRCGRLGHTPLICSAPRRFDG 42
            +YHQ +  PP GA MG V++CGRC R GH  + C+APRRF+G
Sbjct:  489 VYHQPESLPPPGAPMGTVHRCGRCERHGHHAIDCAAPRRFEG 530          
BLAST of mRNA_P-littoralis_Contig1300.9.1 vs. uniprot
Match: A0A6H5JV09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV09_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.160e-6
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    1 MYHQEDLPPPAGAQMGVVYQCGRCGRLGHTPLICSAPRRFDG 42
            +YHQ +  PP GA M  V++C RCGR GH  + C+APRRF+G
Sbjct:  245 VYHQPESLPPPGAPMSTVHRCCRCGRHGHHAIDCAAPRRFEG 286          
BLAST of mRNA_P-littoralis_Contig1300.9.1 vs. uniprot
Match: A0A6H5JU47_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU47_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 7.650e-5
Identity = 21/42 (50.00%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    1 MYHQEDLPPPAGAQMGVVYQCGRCGRLGHTPLICSAPRRFDG 42
            +YHQ    PP GA MG+V++CGR     H  + C+APRRF+G
Sbjct:  375 VYHQPKSLPPPGAPMGIVHRCGRXXXXXHHAIGCAAPRRFEG 416          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1300.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KIP6_9PHAE5.590e-1152.54CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5L4A7_9PHAE5.690e-1152.54CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KYI1_9PHAE5.800e-1152.54CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JBS7_9PHAE9.550e-857.14CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KYB5_9PHAE1.360e-757.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV09_9PHAE1.160e-654.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JU47_9PHAE7.650e-550.00CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.60.10coord: 10..64
e-value: 1.0E-7
score: 33.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..97
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 44..57
score: 8.630785
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 19..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1300contigP-littoralis_Contig1300:31110..31574 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1300.9.1mRNA_P-littoralis_Contig1300.9.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1300 30877..31636 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1300.9.1 ID=prot_P-littoralis_Contig1300.9.1|Name=mRNA_P-littoralis_Contig1300.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=155bp
MYHQEDLPPPAGAQMGVVYQCGRCGRLGHTPLICSAPRRFDGNCTSCHQY
GHTSRDCVTNQGPGAVPPSVPLPQFSDAGGPDDGLQRSGMNDGADRMPLA
QRQLVYDDLPFDRGDGGGCASTTAADKMDLMERGVFRVQWYPNPRPGTNE
ARLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf