prot_P-littoralis_Contig1295.16.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1295.16.1
Unique Nameprot_P-littoralis_Contig1295.16.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length53
Homology
BLAST of mRNA_P-littoralis_Contig1295.16.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 9.350e-15
Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    1 MFPIGFVVWKRFDDDTRLKGQVYDFKAPYWRVRYSDGNWEDLTRTELQKLVR 52
            +FPIGF   K       L+GQVYD+ +PYWRVRY+DGNWE+L+R EL++L R
Sbjct: 1830 VFPIGFTFQKELAGGILLQGQVYDYVSPYWRVRYTDGNWEELSRRELERLAR 1881          
BLAST of mRNA_P-littoralis_Contig1295.16.1 vs. uniprot
Match: A0A6H5JMP6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP6_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.380e-12
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    1 MFPIGFVVWKRFDDDTRLKGQVYDFKAPYWRVRYSDGNWEDLTRTELQKL 50
            +FPI F + K  D    L+GQV+DF  PYWRV YSD NWE+L R EL++L
Sbjct:  824 LFPIDFTLRKELDGGVNLQGQVFDFLQPYWRVGYSDQNWEELARRELERL 873          
BLAST of mRNA_P-littoralis_Contig1295.16.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 4.170e-8
Identity = 23/47 (48.94%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    5 GFVVWKRFDDDTRLKGQVYDFKAPYWRVRYSDGNWEDLTRTELQKLV 51
            GF   K F    +L+GQV+  +  YWRVRYS+ NWE+LTR EL++ +
Sbjct: 1080 GFTSQKDFGGGQKLQGQVFGHRDRYWRVRYSNQNWEELTRQELERCL 1126          
BLAST of mRNA_P-littoralis_Contig1295.16.1 vs. uniprot
Match: A0A6H5JAJ3_9PHAE (RT_RNaseH_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAJ3_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 3.740e-7
Identity = 24/55 (43.64%), Postives = 34/55 (61.82%), Query Frame = 0
Query:    1 MFPIGFVVWKRF-DDDTRLK---GQVYDFKAPYWRVRYSDGNWEDLTRTELQKLV 51
            +FP+G  V + F D D  LK      +D   PYWRV Y DG+WE+LT++E+ K +
Sbjct: 1882 LFPVGTQVGREFADSDGHLKVFKATAFDCCDPYWRVEYPDGDWEELTKSEMDKGI 1936          
BLAST of mRNA_P-littoralis_Contig1295.16.1 vs. uniprot
Match: A0A6H5LDH3_9PHAE (RT_RNaseH_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDH3_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 6.980e-7
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 0
Query:   18 LKGQVYDFKAPYWRVRYSDGNWEDLTRTELQKLVR 52
            L+GQVYD+ +  WRVRY DGNWE+L+R EL++  R
Sbjct:  932 LQGQVYDYLSHCWRVRYIDGNWEELSRRELERPSR 966          
BLAST of mRNA_P-littoralis_Contig1295.16.1 vs. uniprot
Match: A0A836CJM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJM4_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 1.250e-6
Identity = 23/56 (41.07%), Postives = 31/56 (55.36%), Query Frame = 0
Query:    1 MFPIGFVVWKRFDDDTRLK-----GQVYDFKAPYWRVRYSDGNWEDLTRTELQKLV 51
            +FP G  V +   D  + +     G V  + APYWRVRY DG WED T+ +LQ  +
Sbjct:  115 LFPRGTKVAREHRDSLKQRVKYVWGTVVGYLAPYWRVRYEDGEWEDFTKRQLQLAI 170          
BLAST of mRNA_P-littoralis_Contig1295.16.1 vs. uniprot
Match: A0A6H5KNP4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP4_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 2.450e-6
Identity = 25/51 (49.02%), Postives = 33/51 (64.71%), Query Frame = 0
Query:    2 FPIGFVVWKRF---DDDTRL-KGQVYDFKAPYWRVRYSDGNWEDLTRTELQ 48
            FP+   V K     DD+  L +G+V DF  PYWRV +SDG+WE+ TR EL+
Sbjct: 1635 FPLNTEVAKELRDKDDNIILSRGKVCDFYDPYWRVEFSDGDWEEFTRRELR 1685          
BLAST of mRNA_P-littoralis_Contig1295.16.1 vs. uniprot
Match: A0A836CCZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCZ7_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 6.180e-6
Identity = 17/37 (45.95%), Postives = 27/37 (72.97%), Query Frame = 0
Query:   16 TRLKGQVYDFKAPYWRVRYSDGNWEDLTRTELQKLVR 52
            T + G V +F +PYWR+RY DG WE +TRT+++  ++
Sbjct:  101 TYVWGAVKNFVSPYWRIRYEDGEWEQMTRTQVKSAIQ 137          
BLAST of mRNA_P-littoralis_Contig1295.16.1 vs. uniprot
Match: A0A6H5K3V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3V4_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 8.600e-6
Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 0
Query:    2 FPIGFVVWKRF-DDDTRL---KGQVYDFKAPYWRVRYSDGNWEDLTRTELQKLV 51
            FP+   V +   D D  +   +G+V DF  PYWRV++SD +WE+LTR EL++ V
Sbjct: 2180 FPLDTEVARELLDSDGNVVVSRGKVCDFYDPYWRVKFSDDDWEELTRRELRQGV 2233          
BLAST of mRNA_P-littoralis_Contig1295.16.1 vs. uniprot
Match: A0A835Z3Z6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Z6_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 1.670e-5
Identity = 18/34 (52.94%), Postives = 24/34 (70.59%), Query Frame = 0
Query:   18 LKGQVYDFKAPYWRVRYSDGNWEDLTRTELQKLV 51
            L G +  + APYWRVRY DG+WED T+ +LQ  +
Sbjct:  127 LWGTITGYLAPYWRVRYEDGDWEDFTKRQLQCAI 160          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1295.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5KEH2_9PHAE9.350e-1557.69RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5JMP6_9PHAE1.380e-1256.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBF4_9PHAE4.170e-848.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAJ3_9PHAE3.740e-743.64RT_RNaseH_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5LDH3_9PHAE6.980e-760.00RT_RNaseH_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A836CJM4_9STRA1.250e-641.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KNP4_9PHAE2.450e-649.02Integrase catalytic domain-containing protein n=1 ... [more]
A0A836CCZ7_9STRA6.180e-645.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5K3V4_9PHAE8.600e-644.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z3Z6_9STRA1.670e-552.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1295contigP-littoralis_Contig1295:34852..35010 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1295.16.1mRNA_P-littoralis_Contig1295.16.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1295 34697..35092 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1295.16.1 ID=prot_P-littoralis_Contig1295.16.1|Name=mRNA_P-littoralis_Contig1295.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=53bp
MFPIGFVVWKRFDDDTRLKGQVYDFKAPYWRVRYSDGNWEDLTRTELQKL
VR*
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