prot_P-littoralis_Contig128.74.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig128.74.1
Unique Nameprot_P-littoralis_Contig128.74.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length103
Homology
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BLAST of mRNA_P-littoralis_Contig128.74.1 vs. uniprot
Match: A0A6H5KWJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWJ0_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 9.560e-9
Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 0 
Query:    1 MQQREEKVLSIRSMIQRFRETKPTSRQEREQVRKHRKMNEQLWRARDDGPAEKDDDI---QRNSRESDRPLLP 70
            MQ  EE +LS+RSMIQRFRE KPTSRQEREQ  K     + LW  R++ PA KDD++   Q ++ E+DR   P
Sbjct:    1 MQLGEETMLSVRSMIQRFRENKPTSRQEREQRGK-----QDLWWVREESPAGKDDNVRVVQEHTVENDRLRFP 68
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig128.74.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KWJ0_9PHAE9.560e-953.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig128contigP-littoralis_Contig128:438813..439264 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig128.74.1mRNA_P-littoralis_Contig128.74.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig128 438720..439648 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig128.74.1 ID=prot_P-littoralis_Contig128.74.1|Name=mRNA_P-littoralis_Contig128.74.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=103bp
MQQREEKVLSIRSMIQRFRETKPTSRQEREQVRKHRKMNEQLWRARDDGP
AEKDDDIQRNSRESDRPLLPDSHHKTMRWAGAEVRSAAKHNSAYLDADNF
DL*
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