prot_P-littoralis_Contig127.14.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig127.14.3
Unique Nameprot_P-littoralis_Contig127.14.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length514
Homology
BLAST of mRNA_P-littoralis_Contig127.14.3 vs. uniprot
Match: D8LQB4_ECTSI (3\'-5\' exonuclease family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB4_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 4.800e-77
Identity = 127/189 (67.20%), Postives = 150/189 (79.37%), Query Frame = 0
Query:  286 MSIDTETQPSFKVGQWYPTSLLQIATRDEMGEEDVVVIDLLSLKDGLRLPEGLSAVLSGPFASPDVFKLGVGITQDLNEMFFAFGKAPFLKKVPGVLNLNVLHAKSRGGVDS-----QEVSLRKLTSIHLGCALSKRQQMSRWARRPLLDAQIVYAACDVLVALRVFDVLLEASGEVDLQELSSTWMPK 469
            MSIDTETQPSF VG+W+PTSLLQ+ATRD  GEEDV+VIDLLSLKDGL LPE LS  LSGPF SP+V KLGVG+  DL+EM FAF + PFL++VPGVLNLN L+ K  GG  +     +++ LRKL S++LG +LSKRQQMSRWARRPL  AQ+ YAACD LVALRVFD LL A G +D+ EL +TW P+
Sbjct:    1 MSIDTETQPSFAVGEWHPTSLLQVATRDADGEEDVLVIDLLSLKDGLLLPESLSEALSGPFGSPNVVKLGVGLANDLDEMSFAFEETPFLEQVPGVLNLNALNTKLTGGACNDQGIPRDLGLRKLASMYLGRSLSKRQQMSRWARRPLQSAQVNYAACDALVALRVFDALLLALGSLDVGELCTTWTPR 189          
BLAST of mRNA_P-littoralis_Contig127.14.3 vs. uniprot
Match: A0A6H5JKU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKU4_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 4.860e-59
Identity = 109/169 (64.50%), Postives = 129/169 (76.33%), Query Frame = 0
Query:  251 KIPVFGLDIPGSRVHVVDTPDRLEAVGAILGKSVLMSIDTETQPSFKVGQWYPTSLLQIATRDEMGEEDVVVIDLLSLKDGLRLPEGLSAVLSGPFASPDVFKLG------VGITQDLNEMFFAFGKAPFLKKVPGVLNLNVLHAKSRGGV-DSQ----EVSLRKLTSI 408
            ++P+FGLDIP  RVHVVDTP+ +    A+LG+SVLMS+DTETQPSF VG+W+PTSLLQ+ATRD  GEEDV+VIDLLSLKDGL LPE LS  LSGPF SP V KLG      VG+  DL+EM FAF K PFL++VPGVLNLN L+ K  GGV D Q    ++ LRKL S+
Sbjct:  219 QLPLFGLDIPEDRVHVVDTPEGVRDAAAVLGRSVLMSVDTETQPSFAVGEWHPTSLLQVATRDANGEEDVLVIDLLSLKDGLFLPESLSEALSGPFGSPSVVKLGGPLHVGVGLANDLDEMSFAFDKTPFLEQVPGVLNLNALNTKLTGGVCDDQGIPRDLGLRKLASM 387          
BLAST of mRNA_P-littoralis_Contig127.14.3 vs. uniprot
Match: A0A835ZAR5_9STRA (Ribonuclease H-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAR5_9STRA)

HSP 1 Score: 143 bits (360), Expect = 3.700e-35
Identity = 85/209 (40.67%), Postives = 127/209 (60.77%), Query Frame = 0
Query:  247 QQDSKIPVFGLDIPGSRVHVVDTPDRLEAVGAILGKSVLMSIDTETQPSFKV-GQWYPTSLLQIATRDEMGEEDVVVIDLLSLKDGLRLP---EGLSAVLSGPFASPDVFKLGVGITQDLNEMFFAFGKAPFLKKVPGVLNLNVLHAKSRGGVDSQEVSLRKLTSIHLGCALSKRQQMSRWARRPLLDAQIVYAACDVLVALRVFDVLL 451
            Q+ +    + LDIP  +V +VDTP  L+  G++L  S ++++DTETQP+F      + T+LLQIA+R   G E V +IDLL+L     LP   E + + L   F S D+ K+G G+ QD+ E++  + +    +++ GVL  N +H +    V +  +SL+KL   +L C+LSK QQMS WA RPL  +QI YAACD LV LR+ D ++
Sbjct:   48 QETATAMPYVLDIPSDKVTMVDTPAALQWAGSVLRDSSIIALDTETQPNFTPRSPPHRTALLQIASRAADGTEAVFLIDLLAL-----LPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLDPEVVNM-LSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMV 250          
BLAST of mRNA_P-littoralis_Contig127.14.3 vs. uniprot
Match: A0A8K1FGH9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGH9_PYTOL)

HSP 1 Score: 124 bits (310), Expect = 3.440e-27
Identity = 75/205 (36.59%), Postives = 114/205 (55.61%), Query Frame = 0
Query:  253 PVFGLDIPGSRVHVVDTPDRLEAVGAILGKSVLMSIDTETQPSFKVGQWY-PTSLLQIATRDEMGEEDVVVIDLLSLKDGLRLPEGLSAVLSGPFASPDVFKLGVGITQDLNEMFFAFGKAPFLKKVPGVLNLNVLHAKSRGGVDSQEVSLRKLTSIHLGCALSKRQQMSRWARRPLLDAQIVYAACDVLVALRVFDVLLEASGE 456
            P++ +  P   +H V T  + E   A L  + ++ IDTET+P F   + + P+SLLQ+  R    +E+V+++DLLSL      P+  +A LS  F S  + KLG G+  DL E+  ++  A   K   GV+ +N +     G      +SL+KL  ++L   L+K QQ S W RRPL  +Q+ YAACD LV + ++DVL+E   E
Sbjct:   15 PLYTIARPDQVIHFVSTKQQWEQCEARLKAATIIGIDTETRPDFTGKRKFNPSSLLQLGIRTADMKEEVIILDLLSLP-----PKVYNATLSQLFLSKSIIKLGQGLFSDLKELAASYPAASCFKVAKGVVEVNDMSICLAGA--HNPLSLQKLVYLYLHKRLTKTQQTSNWNRRPLSSSQLHYAACDALVLIHIYDVLMERLDE 212          
BLAST of mRNA_P-littoralis_Contig127.14.3 vs. uniprot
Match: A0A2D4BG54_PYTIN (3'-5' exonuclease domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BG54_PYTIN)

HSP 1 Score: 117 bits (293), Expect = 1.270e-25
Identity = 74/201 (36.82%), Postives = 109/201 (54.23%), Query Frame = 0
Query:  253 PVFGLDIPGSRVHVVDTPDRLEAVGAILGKSVLMSIDTETQPSFK-VGQWYPTSLLQIATRDEMGEEDVVVIDLLSLKDGLRLPEGLSAVLSGPFASPDVFKLGVGITQDLNEMFFAFGKAPFLKKVPGVLNLNVLHAKSRGGVDSQEVSLRKLTSIHLGCALSKRQQMSRWARRPLLDAQIVYAACDVLVALRVFDVLLE 452
            P++ ++ P   V  VD  + +         + ++ IDTET+P F+   + +  SLLQIA R    +E+V ++DLL LK     P   +  L G F S  V KLG  +  DL E+  ++  A   +    V+ +N +     G    Q +SL+KL  ++LG  L+K QQMS W RRPL  +QI YAACD LV + ++DVLLE
Sbjct:   17 PMYTIERPEELVKFVDDKETMHYFSERARLATIVGIDTETRPQFRDKHRSHRCSLLQIALRLRDTKEEVFILDLLKLK-----PHMYNKTLLGLFLSQSVIKLGQSLLGDLKELASSYPGASCFRVAKAVVEVNDMSISLMGA--HQALSLQKLVFLYLGKRLTKTQQMSNWNRRPLTTSQIHYAACDALVLIHLYDVLLE 210          
BLAST of mRNA_P-littoralis_Contig127.14.3 vs. uniprot
Match: A0A7S3H5J0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H5J0_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.010e-22
Identity = 72/201 (35.82%), Postives = 106/201 (52.74%), Query Frame = 0
Query:  255 FGLDIPGSRVHVVDTPDRLEAVGAILGKSVLMSIDTETQPSFK-----VGQWYPTSLLQIATRDEMGEEDVVVIDLLSLKDGLRLPEGLSAVLSGPFASPDVFKLGVGITQDLNEMFFAFGKAPFLKKVPGVLNLNVLHAKSRGGVDSQEVSLRKLTSIHLGCALSKRQQMSRWARRPLLDAQIVYAACDVLVALRVFDVL 450
            F  D+P + + +V T + ++ +   L K+ L+ IDTET+P+F      VG    T+L+QIA R     E+V V+D++ +    RL   L   L         FKLG G+T DL E+  ++      +    VL  + L  K    V +  +SL+ L    L   LSK QQMS WA+RPL  +Q+ YAACD LV LR++D +
Sbjct:   44 FVFDLPSTSLIMVTTEEDIQRMKTSLMKATLIGIDTETKPTFVPKAQLVGGPNLTALIQIAVRCPKSIEEVFVVDMIHISRNSRLLILLDYALQQGLLENQCFKLGQGLTNDLRELAKSYPTVKAFRLTSCVLETHDL-IKYLKPVLTNPISLKNLVKEFLHLNLSKSQQMSNWAKRPLTSSQLHYAACDALVLLRLYDAI 243          
BLAST of mRNA_P-littoralis_Contig127.14.3 vs. uniprot
Match: A0A6G0XKK2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKK2_9STRA)

HSP 1 Score: 110 bits (274), Expect = 2.870e-22
Identity = 69/186 (37.10%), Postives = 101/186 (54.30%), Query Frame = 0
Query:  264 VHVVDTPDRLEAVGAILGKSVLMSIDTETQPSFKVGQ-WYPTSLLQIATRDEMGEEDVVVIDLLSLKDGLRLPEGLSAVLSGPFASPDVFKLGVGITQDLNEMFFAFGKAPFLKKVPGVLNLNVLHAKSRGGVDSQEVSLRKLTSIHLGCALSKRQQMSRWARRPLLDAQIVYAACDVLVALRVFD 448
            V  +    +L    A   K+V++ +DTET+P FK G    PTSLLQIATRD+ G+EDV ++DLL+LK G       + +LS  F +P + K+G  +  DL E+  ++  A     V   +  N L  ++  G +   +SL+KL    +   L K  Q S W RRPL   Q+ YAA D LV + ++D
Sbjct:   48 VQFISKASQLANCHACFQKAVVVGLDTETKPEFKKGAPQNPTSLLQIATRDKKGKEDVFILDLLALKPG-----DYNDMLSELFLAPSIVKMGQSLFSDLKELVQSYPSATCFNAVKSAMEANDLF-RAIEGPNLPMMSLQKLVYYSIKQKLVKTHQKSNWNRRPLSPGQLSYAALDALVLVWIYD 227          
BLAST of mRNA_P-littoralis_Contig127.14.3 vs. uniprot
Match: A0A485KTI5_9STRA (Aste57867_11637 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTI5_9STRA)

HSP 1 Score: 107 bits (266), Expect = 3.280e-21
Identity = 70/189 (37.04%), Postives = 98/189 (51.85%), Query Frame = 0
Query:  263 RVHVVDTPDRLEAVGAILGKSVLMSIDTETQPSFKVGQ-WYPTSLLQIATRDEMGEEDVVVIDLLSLKDGLRLPEGLSAVLSGPFASPDVFKLGVGITQDLNEMFFAFGKAPFLKKVPGVLNLNVLHAKSRGGVDSQEVSLRKLTSIHLGCALSKRQQMSRWARRPLLDAQIVYAACDVLVALRVFDVL 450
            RV  +  P ++         +V++ +DTET+P F+ G     TSLLQIATRD  G+E+V + DLL+LK     P   + +LS  F +P V K+G  +  DL E+  A+ +A   +++ G L  N L     G      +SL+KL    L   L K  Q S W RRPL   Q+ YAA D  V L + D L
Sbjct:   45 RVQFISDPSQVAYCHERFRDAVIIGLDTETKPEFQRGAPQNKTSLLQIATRDAAGKEEVFIFDLLALK-----PIHYNKMLSDVFLAPHVLKMGQSLMGDLKELHAAYPRASCFREIRGALEANDLFRVVEGQTQPM-MSLQKLVFYSLREKLVKTHQKSNWNRRPLAPGQLAYAALDAWVLLWIHDDL 227          
BLAST of mRNA_P-littoralis_Contig127.14.3 vs. uniprot
Match: A0A383WN93_TETOB (3'-5' exonuclease domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WN93_TETOB)

HSP 1 Score: 104 bits (260), Expect = 5.490e-20
Identity = 80/226 (35.40%), Postives = 114/226 (50.44%), Query Frame = 0
Query:  246 QQQDSKIPVFGLDIP-GSRVHVVDTPDRLEAVGAILGKSVLMSIDTETQPSFKVGQWYPTSLLQIATRDEMGEEDVVVIDLLSLKDGLRLPEGLSAVLSGPFASPDVFKLGVGITQDLNEMFFAFGKAPFLKKVPGVLNLNVLHA------KSRGGVDS--QEVSLRKLTSIHLGCALSKRQQMSRWARRPLLDAQIVYAACDVLVALRVFDVLLEASGEVDLQEL 462
            Q++  +     L++P GS + V D    L+A   + G  V+  +D E +PS   G+  P +LLQ+ATR     +  ++ DLL+L      P  L A L+  F SP+V KLG G+T DL ++  ++ +    K V GVL+L  L        + +GG      +V L  L S  LG  L K QQMS W  RPL   Q+ YAA D  V  ++FD L    GE   Q+L
Sbjct:  301 QEEARRQQYMQLELPQGSLLFVDDEATLLQAAQLLAGSDVV-GLDVEWKPSHMAGEASPAALLQLATR-----KAALLFDLLALAP--HHPTALDACLAPIFESPEVLKLGFGLTGDLAKLAGSWPEVQAFKVVAGVLDLRPLWVAYGVANRQKGGSVRLLSDVGLSTLCSTLLGKPLDKSQQMSDWTARPLSQRQMHYAALDAFVLPQLFDTLCLQLGEQRSQQL 518          
BLAST of mRNA_P-littoralis_Contig127.14.3 vs. uniprot
Match: A0A6C2UP26_9BACT (3'-5' exonuclease domain-containing protein n=1 Tax=Pontiella sulfatireligans TaxID=2750658 RepID=A0A6C2UP26_9BACT)

HSP 1 Score: 97.1 bits (240), Expect = 1.370e-19
Identity = 66/203 (32.51%), Postives = 109/203 (53.69%), Query Frame = 0
Query:  250 SKIPVFGLDIPGSRVHVVDTPDRLEAVGAILGKSVLMSIDTETQPSFKVGQWYPTSLLQIATRDEMGEEDVVVIDLLSLKDGLRLPEGLSAVLSGPFASPDVFKLGVGITQDLNEMFFAFGKAPFLKKVPGVLNLNVLHAKSRGGVDSQEVSLRKLTSIHLGCALSKRQQMSRWARRPLLDAQIVYAACDVLVALRVFDVLLE 452
            +++P+   D P   +H+  T +  EA    L K  L+  DTET+P+F+ G+ Y  SLLQ+AT +E+    + +              GL+  L    +S D+ K GV + +D++E+       PF    PG   + + H+  + G+  + + LR LT+I LG  +SK++Q+S WARR L ++QI YAA D  +  +++ V LE
Sbjct:   16 NELPMKQYDGP---IHLCVTAEEAEAAAEKLLKEDLLGFDTETRPAFRKGESYDPSLLQLATANEVYLFQIQLC-------------GLTPNLLKVLSSHDIVKTGVALERDVSELQAV---TPFQ---PGGF-VELAHSAKKAGI--KNLGLRGLTAILLGFRISKKEQVSNWARRDLTESQITYAATDAWLGRKIYKVFLE 193          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig127.14.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQB4_ECTSI4.800e-7767.203\'-5\' exonuclease family protein n=1 Tax=Ectocar... [more]
A0A6H5JKU4_9PHAE4.860e-5964.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZAR5_9STRA3.700e-3540.67Ribonuclease H-like domain-containing protein (Fra... [more]
A0A8K1FGH9_PYTOL3.440e-2736.59Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BG54_PYTIN1.270e-2536.823'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A7S3H5J0_9STRA1.010e-2235.82Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6G0XKK2_9STRA2.870e-2237.10Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
A0A485KTI5_9STRA3.280e-2137.04Aste57867_11637 protein n=2 Tax=Aphanomyces stella... [more]
A0A383WN93_TETOB5.490e-2035.403'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6C2UP26_9BACT1.370e-1932.513'-5' exonuclease domain-containing protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 265..451
e-value: 2.1E-16
score: 60.2
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 158..470
e-value: 1.1E-36
score: 128.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 493..513
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 497..513
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..126
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 195..452
NoneNo IPR availableCDDcd06141WRN_exocoord: 267..452
e-value: 3.04991E-32
score: 119.605
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 254..456

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig127contigP-littoralis_Contig127:55793..69718 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig127.14.3mRNA_P-littoralis_Contig127.14.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig127 54834..69803 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig127.14.3 ID=prot_P-littoralis_Contig127.14.3|Name=mRNA_P-littoralis_Contig127.14.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=514bp
MPAAKLLSRLCSRASVNRFRMRSHPCFATGVNMALLSLLLRGAAGFRCSS
GGGGDGGGSSSGRLRAGCSIASRVHHRLLEDVSHGNDDGHRSSVRISNRM
CSSSSSSSGSSSGSGRPSTFSGSRPLAPHALQGFVCGGGGCRSMSSRRRP
RSRGDTNQTTLRAQNASKSSRDGSMPPPPPPQQQQQRQRRRAAPPGPEKI
AGEVRVPTARRQQRRKASSTSDDLNKNKTTKKKKRGRSSSSSNRGQQQDS
KIPVFGLDIPGSRVHVVDTPDRLEAVGAILGKSVLMSIDTETQPSFKVGQ
WYPTSLLQIATRDEMGEEDVVVIDLLSLKDGLRLPEGLSAVLSGPFASPD
VFKLGVGITQDLNEMFFAFGKAPFLKKVPGVLNLNVLHAKSRGGVDSQEV
SLRKLTSIHLGCALSKRQQMSRWARRPLLDAQIVYAACDVLVALRVFDVL
LEASGEVDLQELSSTWMPKSPSEEGLVKDKVVRLRRRIAARKRAMGQQHI
QYERKGKEKPQGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0025623'-5'_exonuclease_dom
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf