prot_P-littoralis_Contig1251.12.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1251.12.1
Unique Nameprot_P-littoralis_Contig1251.12.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length707
Homology
BLAST of mRNA_P-littoralis_Contig1251.12.1 vs. uniprot
Match: A0A6H5JGJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ1_9PHAE)

HSP 1 Score: 493 bits (1269), Expect = 1.550e-162
Identity = 332/571 (58.14%), Postives = 373/571 (65.32%), Query Frame = 0
Query:  140 LVKQAVEAWADDSLDLRRFQGKRVHVCEAETLPEVLSEFWKLASDMAQEKYSAMSSDREYAGHALFVVARCDLLRDYGMMRHLD--------------------------------KVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSRTRSTD-----DANSEGFARVVNFSRSPYPIFGLTASAGSPVRSESIEVRADKIARLRMDLELVYNSVAGRSTDDNVDSHGSLHGTIPSSPEEVEDKTLDWLFGLPASTSTAVSGNNVVANKEKNTVEGVAGDDAGGVVVASIIAEAGGKASGHAGAVAAGEGAFNACGSPSLTSSYEGGLVTSGVNTPEKTLSEVWSIVAQLQKEAAPLLVAAQHKNAAPPSSPSLSISSSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAVEQWTATACGQPEKAIEERGGEEAMQQAASPAEPAGEXXXXXXXXXXXMEVDYSKKPLVSTLLVTPRLHPFNAAQFDKFARNLAIALTQAPITGRIEIEVYHPELVCDGGVVDLARRSPFPTLLLKHCGLKDVLFEPSGKFRHALPPLNFPLD 673
            L+KQAVEAWA++SLDLRRFQGKRVH+C+AETLPEVLSEFW LA+ MAQEKYSAM+ D +YA HALFV  RC LL++Y MMRHLD                                KVLDFCSGGCSDFGRTVTLQHYHPDFVLPPS+TRS+      D N++G +R VNFSR+PYP FGLTA+AGS VRSE IE + DKI  LR+DLELVYNSVAGRSTDD VDS G   G IPSS EEV+DKTLDWL+ LP +      G   V   E+    G AGD+A                                     LTSSYEGGLVTSG+N+PEK           L++EA P L AA+H+ A P  SPSL         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AAVE WT  A      A ++   E+  + AA  A  AG                 +KK L STLLV PRLHPFNAAQF+ FAR LAIAL QAPI  RIE+EVYHPELVCDGGV+DL RRSP+PTLLLKHCGLKDVLFEPSG +RH LPPL  PL+
Sbjct:  114 LIKQAVEAWAEESLDLRRFQGKRVHICKAETLPEVLSEFWSLAAMMAQEKYSAMAGDHDYAAHALFVAPRCALLKNYAMMRHLDPSLSEEIGTCFFIASSPEGLKAKTSRFVFARDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSQTRSSSXXXXVDDNNKGLSRFVNFSRAPYPTFGLTAAAGSLVRSEPIE-KTDKIGHLRLDLELVYNSVAGRSTDDCVDSGGGGRGGIPSSLEEVQDKTLDWLYSLPPALRAGQEG--AVGGVEER---GAAGDEAVSTAXXXXXXXXXXXXXXXXXXX------XXXXXXXXLTSSYEGGLVTSGLNSPEK-----------LREEALPFLAAAEHEEAPP--SPSLXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVEHWTKAATKLKAGAQQDVADEDRGEGAAEAAVGAGVE---------------AKKSLASTLLVAPRLHPFNAAQFENFARTLAIALKQAPIVDRIEVEVYHPELVCDGGVIDLDRRSPYPTLLLKHCGLKDVLFEPSGNYRHVLPPLKLPLE 640          
BLAST of mRNA_P-littoralis_Contig1251.12.1 vs. uniprot
Match: D7G0L3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L3_ECTSI)

HSP 1 Score: 401 bits (1031), Expect = 4.510e-129
Identity = 249/547 (45.52%), Postives = 282/547 (51.55%), Query Frame = 0
Query:  140 LVKQAVEAWADDSLDLRRFQGKRVHVCEAETLPEVLSEFWKLASDMAQEKYSAMSSDREYAGHALFVVARCDLLRDYGMMRHLDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSRTRSTD-----DANSEGFARVVNFSRSPYPIFGLTASAGSPVRSESIEVRADKIARLRMDLELVYNSVAGRSTDDNVDSHGSLHGTIPSSPEEVEDKTLDWLFGLPASTSTAVSGNNVVANKEKNTVE--GVAGDDAGGVVVASIIAEAGGKASGHAGAVAAGEGAFNACGSPSLTSSYEGGLVTSGVNTPEKTLSEVWSIVAQLQKEAAPLLVAAQHKNAAPPSSPSLSISSSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAVEQWTATACGQPEKAIEERGGEEAMQQAASPAEPAGEXXXXXXXXXXXMEVDYSKKPLVSTLLVTPRLHPFNAAQFDKFARNLAIALTQAPITGRIEIEVYHPELVCDGGVVDLARRSPFPTLLLKHCGLKDVLFEPSGKFRHALPPLNFPLDNDDDND 679
            L+KQAVEAWAD+SLDLRRFQGKRVH+C+AETLPEVLSEFW LAS MAQEKYSAM+ DR+YA HALFV  RC LL+DY MMRHLDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPS+TRS+      D N++G +R VNFSR+PYP FGLTA+AGS VRSE IE + DKI  LR+DLELVYNSVAGRSTDD VDSHGS HGTIPSSPEEV+DK LDWL+ LP +      G        + +VE  G AGD+A  V  A+I+                            LTSSYEGGLVTSG+N+PEK                                                                                                                                                                                   VYHPELVCDGGV+D+ RRSP+PTLLLKHCGLKDVLFEPSG +RH LPPL  PL+++D  D
Sbjct:  126 LIKQAVEAWADESLDLRRFQGKRVHICKAETLPEVLSEFWSLASMMAQEKYSAMAGDRDYAAHALFVAPRCALLKDYAMMRHLDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSQTRSSSXXXXVDDNNKGLSRFVNFSRAPYPTFGLTAAAGSLVRSEPIE-KTDKIGHLRLDLELVYNSVAGRSTDDCVDSHGSPHGTIPSSPEEVQDKALDWLYSLPPALQAGQEG-------AEGSVEERGAAGDEA--VSTAAIV----NXXXXXXXXXXXXXXXXXXXXXXXLTSSYEGGLVTSGLNSPEK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VYHPELVCDGGVIDIDRRSPYPTLLLKHCGLKDVLFEPSGNYRHVLPPLKLPLEDEDSED 479          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1251.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JGJ1_9PHAE1.550e-16258.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0L3_ECTSI4.510e-12945.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 675..691
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 666..706
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..562

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1251contigP-littoralis_Contig1251:36382..43772 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1251.12.1mRNA_P-littoralis_Contig1251.12.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1251 36089..44469 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1251.12.1 ID=prot_P-littoralis_Contig1251.12.1|Name=mRNA_P-littoralis_Contig1251.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=707bp
MMIKSRSGLALGFLVASTTTWCRSGVVNAFPQPGLQQWRIQQLQQQQQQR
KTAKAGASERLSSRLGSRGCTRDRGGVWGGVYGRLYAKPADPPSSSAAPG
KKEEEQKSGEKKRSPHRRRPRSSSSSSSSSSSGRGGGKALVKQAVEAWAD
DSLDLRRFQGKRVHVCEAETLPEVLSEFWKLASDMAQEKYSAMSSDREYA
GHALFVVARCDLLRDYGMMRHLDKVLDFCSGGCSDFGRTVTLQHYHPDFV
LPPSRTRSTDDANSEGFARVVNFSRSPYPIFGLTASAGSPVRSESIEVRA
DKIARLRMDLELVYNSVAGRSTDDNVDSHGSLHGTIPSSPEEVEDKTLDW
LFGLPASTSTAVSGNNVVANKEKNTVEGVAGDDAGGVVVASIIAEAGGKA
SGHAGAVAAGEGAFNACGSPSLTSSYEGGLVTSGVNTPEKTLSEVWSIVA
QLQKEAAPLLVAAQHKNAAPPSSPSLSISSSPASAASAKTGTAADSAPAA
VGAAAAAAAGAAALAAMTAAVEQWTATACGQPEKAIEERGGEEAMQQAAS
PAEPAGEGEGEVEVEVEEMEVDYSKKPLVSTLLVTPRLHPFNAAQFDKFA
RNLAIALTQAPITGRIEIEVYHPELVCDGGVVDLARRSPFPTLLLKHCGL
KDVLFEPSGKFRHALPPLNFPLDNDDDNDNTKSDEDHPSSPDASGAGDVP
AEDAQL*
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