prot_P-littoralis_Contig125.27.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig125.27.1
Unique Nameprot_P-littoralis_Contig125.27.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length517
Homology
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BLAST of mRNA_P-littoralis_Contig125.27.1 vs. uniprot
Match: D8LCZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCZ4_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 1.520e-65
Identity = 189/472 (40.04%), Postives = 223/472 (47.25%), Query Frame = 0 
Query:   37 MEASLSNFLGKGPSNGTPTKRPAAAINFADKYRPDVQHLQSLGLTRAMRALDSLRKHNATAEEGDELGASGRLDVNDRAGLFTLCGCQRGCRLTSDEMKTIQRVTHGMAEVFTSLELQFKALAPRMRG--SDGEQADYQDQLEAFFEAAGTWLEFYGEARALASRKQSVLRLELTLSERRARGGAVGSPGR-MERVPRFP-AWLTTLIERYQTEHRRLLLGSADTGARGHRSVPESHAPPDSKMVVEDIAKGPTEAGAGXXXXXXEETSGETAATAGGEAAAMVSDEANVAADSSAENVTADSSDGKPSLDSLVEFSRFLSLLVESAKQEEQMPLSPATEKERAALDELLRARQVGGEKTWGDKSNSNSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRLKSPRPVGSPGSPRPLRYWARRIHQFLLSVRELRAVPERDPNRLEELMSEIRRGRGGRGKRSSLSPPLGFV 504
            M+ SL NFLG         + P  A+NF D+  P ++ L+ LGLT+AMRALD LRKHNAT  E   LGASGRLD  DRAGL TLCGCQRGCRLTSDEMKT+QR+T GM  +F SLELQF+ LAP++R   S GE +   +   AFF AA     F+         K S    +    +    GG    P R +++   F  A  +T    Y T             + G RS  ES   P S       A+G             E  S E   T GG A                           P + SLV FSR+L+LLV SA QEE  P   A E ER+AL ELLRA   G +       N+                                       PVGSPGSPRPLRYWARRIH+FLLSVRELR VP+RD   LEE+M E RRG          SPP   V
Sbjct:    1 MQVSLCNFLG------VVGRSPKTAVNFVDEDLPVLEDLRRLGLTKAMRALDGLRKHNATKAEESMLGASGRLDTQDRAGLLTLCGCQRGCRLTSDEMKTVQRLTRGMDGLFASLELQFETLAPKLRKRVSAGEGSARSEAFGAFFPAA-----FHHP-------KDSCQGCDSNGDD----GGGSAKPERGLQQASSFDNATSSTKAVGYTTT------------SMGPRSTEESKITPISTTTT--AAEG-----------LVERNSDEKGGT-GGRAPECAG----------------------PPMGSLVRFSRYLALLVASA-QEEHTP--SANECERSALAELLRASDDGSDSGSSGVVNTRHPGTSNIVHQNQSPAAPAPGPST---------------PVGSPGSPRPLRYWARRIHRFLLSVRELRTVPDRDLASLEEIMLEARRGXXXXXXXRRASPPRALV 384
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig125.27.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCZ4_ECTSI1.520e-6540.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 483..516
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 363..448
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 323..338
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 367..390
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..338

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig125contigP-littoralis_Contig125:124659..128775 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig125.27.1mRNA_P-littoralis_Contig125.27.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig125 124479..128880 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig125.27.1 ID=prot_P-littoralis_Contig125.27.1|Name=mRNA_P-littoralis_Contig125.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=517bp
MEPFGSPSQPSSPPSIPKPPPTLPPLALPPPASLSIMEASLSNFLGKGPS
NGTPTKRPAAAINFADKYRPDVQHLQSLGLTRAMRALDSLRKHNATAEEG
DELGASGRLDVNDRAGLFTLCGCQRGCRLTSDEMKTIQRVTHGMAEVFTS
LELQFKALAPRMRGSDGEQADYQDQLEAFFEAAGTWLEFYGEARALASRK
QSVLRLELTLSERRARGGAVGSPGRMERVPRFPAWLTTLIERYQTEHRRL
LLGSADTGARGHRSVPESHAPPDSKMVVEDIAKGPTEAGAGAGAGAGEET
SGETAATAGGEAAAMVSDEANVAADSSAENVTADSSDGKPSLDSLVEFSR
FLSLLVESAKQEEQMPLSPATEKERAALDELLRARQVGGEKTWGDKSNSN
SDDGGEGNKEEDSKILQPPPPPPPATTTTTTRRLKSPRPVGSPGSPRPLR
YWARRIHQFLLSVRELRAVPERDPNRLEELMSEIRRGRGGRGKRSSLSPP
LGFVPSPGIVGDGGCS*
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