prot_P-littoralis_Contig125.139.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig125.139.3
Unique Nameprot_P-littoralis_Contig125.139.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1322
Homology
BLAST of mRNA_P-littoralis_Contig125.139.3 vs. uniprot
Match: D8LFQ9_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ9_ECTSI)

HSP 1 Score: 521 bits (1343), Expect = 4.960e-159
Identity = 548/1345 (40.74%), Postives = 662/1345 (49.22%), Query Frame = 0
Query:    1 MEAKNRRTSDVAR---------------GGSGGYLTPPK---EGQRRDLASSGRGVSPEVS-RTARPKQAVGPPVGEGRRGHGAEERDGXXXXXXXTRAGRARGSRSLSFPLEGLQK-SGCFVTPKKISGSGFGGG---------VHRMAVSPSAHEPVRIAPMARRGATTNAFLGANDSNSHQYDRG---SVYDDHGKTAAARGATAASAHDGEGATPRRLIARTHDETRDGSSGATAAADEAC--QSDRSGFGVGRSRDRRSATESM-RGGVAGVEENGRAGGGQSMDALRADSVAAE-RNAVELVAVGYDEWKEACTAQGKIYYYNRRTRVPRWTLPPTATYVPNHGQPAGYRIFALA-TPAVSLNXXXXXXXXXXXGSRRTDECVSDASRGRVDPFV-SLGGAGGGDNAEAFS--QTWGVSDRGGGDGS-----RLPEVAPTTAT---TPAAATXXXXXXX--------ASTAITNATDCCGLGHDDSAATAAKQRFVVHKSGLWASSSTSTAAAPSSARAELPETAPTRAPTTPSSSPSQT-AITGNDNPATFVAE-ATPGGV--NNETPVLTEETRELINLDMSPA-PHTTTTGRANDSADEETAHAASQAAAAGSLGGVAGVRAGVG------RVVSGLTVLKQSEGAVRMHQTPEEDAESLVVLRAGAAVDVQPAPEDTNPAAGAGTASPLTAAVPDEPVPSPITVGGKQWETQEGAVSPAGSAQTAPTTVEGSGSLDTPIPATVTAAVAATSGNQFFEAED--REQPMERCRHTDGAEGPSLSRSFSSASLTDFVHSVRVDSGGRGDASLSSPVYRAS----GAKGLVPSRGGDGTNEDETEMEEEAVFSSGRSQGMLRRRPLGPVRRSEELTCPASSRKSREQDFG-------PYAEATPAATGG-TPTTALAGLSVNQVR-------SRSRSDALAAAREDTVDLARGSGI------------GEMRDNGL-PGSSVLRHRVRRQLFSEKSEARPLVFCPFCGEGNLCAGGLQGHLQVCYVLDRCRGGETHKQVEVAIKAIAVDNQNPAPIGSVSPREDESL-----RTSSTVLQQQAPPAALVSKNVGSGPENLLA--AASEAFELGG----GAGXXGVGAVVSGAGLEISSGGEGG---EVERCEGCGRTFAPGRLQSHAKACRRVFLERRRPYDLKAMRARGTPLEFFQKPIGEACAEGNTSICGKEADGGNSAATRRAGTKAFP--VGGSSMRQNRALRGGHGDHVSP-----NVGGPMGTARPTRGGGGGPDPVRGRYDIF--LPH---SAHCPFCSGSIPRAKFSAHLLRCKKPRKTHSVRRAEFGSS 1218
            MEA++RR SD                  G +   LTPPK   +G  RDLA     + PE + RTA P +A G   G    G+  E  D   XXXXX    R   + S + PLEGL K  GCFVTPKKISG    G            RM VSPS HEPVRIAPM R   +                     +    H +TAA +     +   G   T  R + R   +T  GS+GATA  D+    Q++ S F VGRS +R SA ESM RG                        VAA   +A EL+ V +DEWKEA TA+GKIYYYNRRTRVPRWTLPPTAT+VP+  +PAGYRIFALA T  +++            GS RT       S G +DP +   GGAG G   EA S  + +G  + GGG         L EV P T +   +PAA++   XXXX        AS  + N     G G D  A T  K+R                            E+AP  A  +P  +      +T  +N  T  A  A P G    +ET  L E+TR+    D  P  P + T  R + S      H+ S  +A    GG AG+  G                      AV   +TP    E  V + +    +V P      PAA    A+        E         G+++ET+      A     APTT  G+G + T     + AA A  +G Q   ++     Q                    SSASL DFVH VRV SGGRGDASLSSP  R++    G +G    R GD     + E      FSS R  G   RRPLGPVRRSEE+  P SSR S+ Q+         P A+    AT   TPTTALAG+ V Q         SRSR  A A    DTV  + GSG+            G     GL PGSSVLRHRVRRQLFSE SEARPLVFCPFCGEG + AGGL+ HLQ CYVLDRCRG ETHKQVEVAI+A++V++Q      +   +   SL     + SST+LQ   PP   VSK  G+GPEN+LA   ASE  ELGG    G G       VSG GLE+S GG G    E ERC  CGRTFAPGRL+SHAKACR VFLERRRPYD KAMRARGTPLEFFQ+PIG A ++GN S  G   DGG +AA+RR   +  P  VGGSS+R+  + + G  D VSP     +VG   G++R   G  GG    R +      LP    SAHCPFCS SIPRAK SAHLLRCKK R++ +  R E G S
Sbjct:    1 MEAEHRRRSDERERAAYDGSSPASAALLGSTTDCLTPPKLDGQGGDRDLALV---MKPERAVRTAWPDRAAGRATG----GY-CERSDRGGXXXXXXXXXRNARAVSPTLPLEGLHKMEGCFVTPKKISGHVLLGNRGXXXXXXXXRRMGVSPSDHEPVRIAPMVRHDRSDXXXXXXXXXXXXXXXXXXXXAATSMHTRTAAKQHENDRAYTLGFSTTETRPVDRGDRKT--GSTGATAVVDDFPWKQTESSRFVVGRSSERMSAAESMGRGXXXXXXXXXXXXXXXXXXXXCLGGVAAAGHDAAELLTVEHDEWKEARTAEGKIYYYNRRTRVPRWTLPPTATFVPDPNRPAGYRIFALAATVNINIGDKSTAPASATSGSERT-------SGGVIDPLLRGPGGAGAGGAREADSSRERFGRDNSGGGGAPLLIAPTLSEVTPMTTSDLESPAASSPTTXXXXXXXXXXXXASARVKNGVGTTGCG-DGGAVTTPKRR----------------------------ESAPPAAARSPRDNGGTVETLTSTENAHTVSASPAPPTGYFSADETASLVEKTRDD---DKHPERPVSPTAPRLSCSVG----HSMSVPSA----GGGAGIEGGAAPPXXXXXXXXXXXXXXXXGSAVGEGKTPRRQVEHGVEVGSACLTEVLP----DEPAAVTTRAAXXXXXXVRE---------GEEFETE------AQLTVDAPTT-GGAGPVKTDRELEMEAAAAMATGQQGLSSQSGGAGQRXXXXXXXXXXXXXXXXXXXSSASLQDFVHYVRVQSGGRGDASLSSPASRSNRRRGGGQGAGAMRSGDAHMSKDKE-----AFSSERIPGTFHRRPLGPVRRSEEMEHPLSSRSSKPQEHHSHQGLEEPAADTALWATAAETPTTALAGVPVYQTHXXXXXXSSRSRRSAQA----DTVRYS-GSGVSGGKTGVCDAKGGSSGGRGLLPGSSVLRHRVRRQLFSEDSEARPLVFCPFCGEGVVRAGGLRDHLQECYVLDRCRGSETHKQVEVAIRAVSVEHQMHTSATNTHGKGASSLNGGSFQDSSTLLQHALPP--FVSK--GNGPENVLAPAVASENSELGGVVATGGGRGAAAGEVSGVGLEVSLGGGGAGGAEEERCGDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAASSDGNPSTSGTGGDGGGTAASRRGVGRNNPSSVGGSSVRREGSSQSGGADCVSPGELDVSVGTGGGSSRGAGGEVGGSFLRRSKKVALKTLPAVEGSAHCPFCSTSIPRAKLSAHLLRCKKLRRSQTCPRPEAGPS 1254          
BLAST of mRNA_P-littoralis_Contig125.139.3 vs. uniprot
Match: A0A6H5KQR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR3_9PHAE)

HSP 1 Score: 377 bits (968), Expect = 4.250e-113
Identity = 285/567 (50.26%), Postives = 328/567 (57.85%), Query Frame = 0
Query:  836 TPTTALAGLSVNQVR-----SRSRSDALAAAREDTVDLARGSGIG------------EMRDNGL-PGSSVLRHRVRRQLFSEKSEARPLVFCPFCGEGNLCAGGLQGHLQVCYVLDRCRGGETHKQVEVAIKAIAVDNQNPAPIGSVSPRE-----DESLRTSSTVLQQQAPPAALVSKNVGSGPENLLA--AASEAFELGGGAGXXGV----GAVVSGAGLEISSGGEGG---EVERCEGCGRTFAPGRLQSHAKACRRVFLERRRPYDLKAMRARGTPLEFFQKPIGEACAEGNTSICGKEADGGNSAATRRAGTKAFP--VGGSSMRQNRALRGGHGDHVSP-----NVGGPMGTARPTRGGGGGPDPVRGRYDIF--LPH---SAHCPFCSGSIPRAKFSAHLLRCKKPRKTHSVRRAEFGSS-RTSGTSTDTT---HNND-------NGDDIIGMSK----STARKVRCPHCSRGFSPSVAPTHISICARVENRPKSAATR----ATHKDADTGV-LDVYHAPAFLVSGPGRIQS-----------------EKARVMPPFY 1321
            TPTTALAG+   Q       SRSR  A A    DTV  + GSG+G                 GL PGSSVLRHRVRRQLFSE SEARPLVFCPFCGEG + A GL+ HLQ CYVLDRCRG ETHKQVEVAIKA++V+NQ      +   R      D S + SST+LQ    P   VSK  G+ PEN+LA   ASE  ELG      G+    G  VSG   E+SSGG G    + ERCE CGRTFAPGRL+SHAKACR VFLERRRPYD KAMRARGTPLEFFQ+PIG A ++ N +  GK  DGG +AA+RR   +  P  VGGSS+R+  +   G  D VSP     +VG   G++R   G  GG    R +      LP     AHCPFCS SIPRAK SAHLLRCKK R++ +  R + G S R SGT        H +D       NG            + +RKVRCPHC RGFSP+VAPTHISICARVENRPK + T     A   DA   V L V +  A    G   + +                 EKARVMPPFY
Sbjct:   39 TPTTALAGVPGYQTHHHHPSSRSRRSAQA----DTVRYS-GSGVGGGNXXXXXXXXXXSEGRGLLPGSSVLRHRVRRQLFSEDSEARPLVFCPFCGEGVVRARGLRDHLQECYVLDRCRGSETHKQVEVAIKAVSVENQMHTSATNTHGRRASSLNDGSFQDSSTLLQHALSP--FVSK--GNDPENVLAPAVASENSELGRVVATGGLRGTAGGEVSGVSSEVSSGGGGAGGAKFERCEDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAASSD-NPTTSGKGGDGGGNAASRRGVGRNKPSSVGGSSVRREGSSESGDADRVSPGGLDVSVGTGGGSSRGVGGEVGGSFLRRSKKVALKTLPAVEGRAHCPFCSSSIPRAKLSAHLLRCKKLRRSQTCPRPKTGPSPRISGTDASNATVIHEDDKARTATYNGGXXXXXXXXXXXNASRKVRCPHCLRGFSPAVAPTHISICARVENRPKGSGTAKAAAARKDDAQKKVALGVGYTDASPPGGRKGLAASHGSSGAXXXXXXXXXPEKARVMPPFY 595          
BLAST of mRNA_P-littoralis_Contig125.139.3 vs. uniprot
Match: A0A835Z7V0_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7V0_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.970e-16
Identity = 83/241 (34.44%), Postives = 100/241 (41.49%), Query Frame = 0
Query:  886 SVLRHRVRRQLFSEKSEARPLVFCPFCGEGNLCAGGLQGHLQVCYVLDRCRGGETHKQVEVAIKAIAVDNQNPAPIGSVSPREDESLRTSSTVLQQQAPPAALVSKNVGSGPENLLAAASEAFELGGGAGXXGVGAVVSGAGLEISSGGEGGEVERCEGCGRTFAPGRLQSHAKACRRVFLERRRPYDLKAMRARGTPLEFFQKPIGEACAEGNTSICGKEADGGNSAATR--RAGTKAFP 1124
            S +RH  RRQLFSE + A+P V+CP+CGE    A  L  HL  C VL+R RGG   + VE A+ A                              + A  AA              A        GGGA                      GE E+C  CGRTFA GR+ +HA+ CRRVF  RR  +D +  R RGTPL F Q+      AE    + G    GG  AAT   R  T A P
Sbjct:  683 SAVRHGPRRQLFSEGAPAQPSVYCPYCGERED-AAALAAHLAACVVLERARGGPAQRSVEAALLAA-----------------------------RDAADAAXXXXXXXXXXXXXXAPRERFVRSGGGA--------------------RSGE-EQCADCGRTFAEGRIDAHARVCRRVFGARRPVFDGRERRLRGTPLAFMQR------AEATGGVGGS---GGKRAATAPLRLATPALP 863          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig125.139.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LFQ9_ECTSI4.960e-15940.74WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KQR3_9PHAE4.250e-11350.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z7V0_9STRA3.970e-1634.44WW domain-containing protein n=1 Tax=Tribonema min... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.70.10coord: 277..307
e-value: 5.5E-9
score: 37.3
NoneNo IPR availablePFAMPF13913zf-C2HC_2coord: 1040..1062
e-value: 1.8E-6
score: 27.7
coord: 1248..1269
e-value: 0.0036
score: 17.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 703..724
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 477..500
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 461..515
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..254
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 801..837
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 530..553
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 703..717
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 279..306
score: 10.442801
IPR001202WW domainCDDcd00201WWcoord: 277..304
e-value: 3.97569E-5
score: 39.8186
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 278..308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig125contigP-littoralis_Contig125:497417..509896 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig125.139.3mRNA_P-littoralis_Contig125.139.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig125 494505..510532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig125.139.3 ID=prot_P-littoralis_Contig125.139.3|Name=mRNA_P-littoralis_Contig125.139.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1322bp
MEAKNRRTSDVARGGSGGYLTPPKEGQRRDLASSGRGVSPEVSRTARPKQ
AVGPPVGEGRRGHGAEERDGGGGGGGGTRAGRARGSRSLSFPLEGLQKSG
CFVTPKKISGSGFGGGVHRMAVSPSAHEPVRIAPMARRGATTNAFLGAND
SNSHQYDRGSVYDDHGKTAAARGATAASAHDGEGATPRRLIARTHDETRD
GSSGATAAADEACQSDRSGFGVGRSRDRRSATESMRGGVAGVEENGRAGG
GQSMDALRADSVAAERNAVELVAVGYDEWKEACTAQGKIYYYNRRTRVPR
WTLPPTATYVPNHGQPAGYRIFALATPAVSLNNNNNGATTTTSGSRRTDE
CVSDASRGRVDPFVSLGGAGGGDNAEAFSQTWGVSDRGGGDGSRLPEVAP
TTATTPAAATRTSTTTMASTAITNATDCCGLGHDDSAATAAKQRFVVHKS
GLWASSSTSTAAAPSSARAELPETAPTRAPTTPSSSPSQTAITGNDNPAT
FVAEATPGGVNNETPVLTEETRELINLDMSPAPHTTTTGRANDSADEETA
HAASQAAAAGSLGGVAGVRAGVGRVVSGLTVLKQSEGAVRMHQTPEEDAE
SLVVLRAGAAVDVQPAPEDTNPAAGAGTASPLTAAVPDEPVPSPITVGGK
QWETQEGAVSPAGSAQTAPTTVEGSGSLDTPIPATVTAAVAATSGNQFFE
AEDREQPMERCRHTDGAEGPSLSRSFSSASLTDFVHSVRVDSGGRGDASL
SSPVYRASGAKGLVPSRGGDGTNEDETEMEEEAVFSSGRSQGMLRRRPLG
PVRRSEELTCPASSRKSREQDFGPYAEATPAATGGTPTTALAGLSVNQVR
SRSRSDALAAAREDTVDLARGSGIGEMRDNGLPGSSVLRHRVRRQLFSEK
SEARPLVFCPFCGEGNLCAGGLQGHLQVCYVLDRCRGGETHKQVEVAIKA
IAVDNQNPAPIGSVSPREDESLRTSSTVLQQQAPPAALVSKNVGSGPENL
LAAASEAFELGGGAGGGGVGAVVSGAGLEISSGGEGGEVERCEGCGRTFA
PGRLQSHAKACRRVFLERRRPYDLKAMRARGTPLEFFQKPIGEACAEGNT
SICGKEADGGNSAATRRAGTKAFPVGGSSMRQNRALRGGHGDHVSPNVGG
PMGTARPTRGGGGGPDPVRGRYDIFLPHSAHCPFCSGSIPRAKFSAHLLR
CKKPRKTHSVRRAEFGSSRTSGTSTDTTHNNDNGDDIIGMSKSTARKVRC
PHCSRGFSPSVAPTHISICARVENRPKSAATRATHKDADTGVLDVYHAPA
FLVSGPGRIQSEKARVMPPFY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf