prot_P-littoralis_Contig122.152.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig122.152.1
Unique Nameprot_P-littoralis_Contig122.152.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length100
Homology
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BLAST of mRNA_P-littoralis_Contig122.152.1 vs. uniprot
Match: D7FKI9_ECTSI (Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKI9_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 8.930e-15
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 0 
Query:   18 MAVPGIPGKSIHIAAMDGDVSAVQRWLDAGNFVDKRDGAERTGL 61
            MAVPG  GKS+H+A MDGD +AVQRWLDAGNFVDKRD + RTGL
Sbjct:    4 MAVPGTQGKSLHLACMDGDAAAVQRWLDAGNFVDKRDSSGRTGL 47
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig122.152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKI9_ECTSI8.930e-1577.27Chain A, 4ank: A Designed Ankyrin Repeat Protein W... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 25..100
e-value: 1.8E-19
score: 71.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 26..97
IPR002110Ankyrin repeatPFAMPF13637Ank_4coord: 27..77
e-value: 3.0E-8
score: 34.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 56..88
score: 11.00669
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 26..96
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 56..88
score: 9.648697

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig122contigP-littoralis_Contig122:450552..453398 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig122.152.1mRNA_P-littoralis_Contig122.152.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig122 450550..453398 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig122.152.1 ID=prot_P-littoralis_Contig122.152.1|Name=mRNA_P-littoralis_Contig122.152.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=100bp
VRSNPALEVLSTTTFIAMAVPGIPGKSIHIAAMDGDVSAVQRWLDAGNFV
DKRDGAERTGLHQASWSGRIEVVSLLLGAYADVNAQDKQQRTPLHLCSEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt