prot_P-littoralis_Contig1215.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1215.3.1
Unique Nameprot_P-littoralis_Contig1215.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length154
Homology
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BLAST of mRNA_P-littoralis_Contig1215.3.1 vs. uniprot
Match: A0A6H5K1G6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1G6_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 7.810e-18
Identity = 48/96 (50.00%), Postives = 55/96 (57.29%), Query Frame = 0 
Query:   19 EMDTDQHSTPRRQSLGSRPAITPSLSVQRAEDGRRKRRTXXXXXXXXXXXXXXXXXXXAE---YPPGFRRGRAGIDEAKLPVYKFLQQGVREEGGQ 111
            +MDT   STP RQSLG+RPA+TP+ S ++ ED RRKRRT                        YP GF+ GR G D AKLPVY FLQQG  EEG Q
Sbjct:   23 DMDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQATHDSTKGNGPNYPRGFKPGREGSDGAKLPVYMFLQQGALEEGVQ 118
[Close]
BLAST of mRNA_P-littoralis_Contig1215.3.1 vs. uniprot
Match: A0A6H5KRI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRI1_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 8.790e-17
Identity = 48/96 (50.00%), Postives = 55/96 (57.29%), Query Frame = 0 
Query:   19 EMDTDQHSTPRRQSLGSRPAITPSLSVQRAEDGRRKRRTXXXXXXXXXXXXXXXXXXXAE---YPPGFRRGRAGIDEAKLPVYKFLQQGVREEGGQ 111
            +MDT   STP RQSLG+RPA+TP+ S ++ ED RRKRRT                        YP GF+ GR G D AKLPVY FLQQG  EEG Q
Sbjct:   23 DMDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQATHDSTKGNGPNYPCGFKPGREGSDGAKLPVYMFLQQGALEEGVQ 118
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1215.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K1G6_9PHAE7.810e-1850.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KRI1_9PHAE8.790e-1750.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1215contigP-littoralis_Contig1215:16106..17535 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1215.3.1mRNA_P-littoralis_Contig1215.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1215 15943..17874 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1215.3.1 ID=prot_P-littoralis_Contig1215.3.1|Name=mRNA_P-littoralis_Contig1215.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=154bp
MKHLILLLWAGAWAVRGTEMDTDQHSTPRRQSLGSRPAITPSLSVQRAED
GRRKRRTSGRAPAGTDAASTSTKEEGAEYPPGFRRGRAGIDEAKLPVYKF
LQQGVREEGGQPFEIQQGATQRMALPVNNEEREEVVRAATWRNADHVFET
RST*
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