prot_P-littoralis_Contig121.77.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig121.77.2
Unique Nameprot_P-littoralis_Contig121.77.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length321
Homology
BLAST of mRNA_P-littoralis_Contig121.77.2 vs. uniprot
Match: D8LEJ1_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ1_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 8.210e-68
Identity = 110/137 (80.29%), Postives = 120/137 (87.59%), Query Frame = 0
Query:  128 MDASLNKGNPPKSYYGITVEFPFETPMVPQGQMMQRIIAALKSGKHALLESPTGTGKSAAMLCATLAWQRDELFRTGKAPQIFYGARTHTQLVQMAKTLKTLPYVPTMATLGSRARLCINPMVVGDDLADGEQLQDD 264
            MDAS   G+PPK+YYGI VEFPFETPMVPQ QMMQRIIAALKS +HALLESPTGTGKSAAMLCA+LAWQRDELFRTGKAPQIFYGARTHTQL QM + +K+ PY PTMATLGSRARLCINPMVVGD  A  ++  D+
Sbjct:    1 MDASRQLGDPPKNYYGIKVEFPFETPMVPQDQMMQRIIAALKSKRHALLESPTGTGKSAAMLCASLAWQRDELFRTGKAPQIFYGARTHTQLEQMVRVVKSSPYCPTMATLGSRARLCINPMVVGDGAAKDDEPSDE 137          
BLAST of mRNA_P-littoralis_Contig121.77.2 vs. uniprot
Match: A0A812QM34_SYMPI (Rtel1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812QM34_SYMPI)

HSP 1 Score: 123 bits (309), Expect = 1.480e-27
Identity = 64/124 (51.61%), Postives = 82/124 (66.13%), Query Frame = 0
Query:  140 SYYGITVEFPFETPMVPQGQMMQRIIAALKSGKHALLESPTGTGKSAAMLCATLAWQRDELFRTGKAPQIFYGARTHTQLVQMAKTLKTLPYVPTMATLGSR-ARLCINPMVVGDDLADGEQLQ 262
            ++ GI V FPFE P+ PQ  ++Q ++ AL  GKHA+LESPTGTGK+AA+LCA LAWQR  + +TG APQ+ Y  RTH Q+ Q  + L+  PY P  A LGSR A LCI   V+     DG+  Q
Sbjct:  243 NFGGIEVLFPFEQPLEPQRAVIQNVLEALVLGKHAVLESPTGTGKTAAVLCACLAWQRHRMSKTGSAPQLMYATRTHAQVRQAIRELRRTPYRPITAVLGSRGAGLCIKDEVLRSSEDDGQLRQ 366          
BLAST of mRNA_P-littoralis_Contig121.77.2 vs. uniprot
Match: A0A812ZFR4_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812ZFR4_9DINO)

HSP 1 Score: 122 bits (305), Expect = 4.930e-27
Identity = 61/121 (50.41%), Postives = 82/121 (67.77%), Query Frame = 0
Query:  140 SYYGITVEFPFETPMVPQGQMMQRIIAALKSGKHALLESPTGTGKSAAMLCATLAWQRDELFRTGKAPQIFYGARTHTQLVQMAKTLKTLPYVPTMATLGSR-ARLCINPMVVGDDLADGE 259
            ++ G+ V FPFE P+ PQ  +++ ++ AL  GKHA+LESPTGTGK+AA+LCA +AWQR  + +TG APQ+ +  RTH Q+ Q  + LK  PY P MA LGSR A LCI   V+     DG+
Sbjct:  133 NFGGVEVLFPFEQPLEPQRAVIRNVLEALTLGKHAVLESPTGTGKTAAVLCACIAWQRHRMRKTGSAPQVMFATRTHAQVRQAIRELKRTPYRPIMAVLGSREAGLCIKEEVLQSAEDDGQ 253          
BLAST of mRNA_P-littoralis_Contig121.77.2 vs. uniprot
Match: A0A1Q9DHK7_SYMMI (Regulator of telomere elongation helicase 1-like n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DHK7_SYMMI)

HSP 1 Score: 121 bits (304), Expect = 6.510e-27
Identity = 61/121 (50.41%), Postives = 82/121 (67.77%), Query Frame = 0
Query:  140 SYYGITVEFPFETPMVPQGQMMQRIIAALKSGKHALLESPTGTGKSAAMLCATLAWQRDELFRTGKAPQIFYGARTHTQLVQMAKTLKTLPYVPTMATLGSR-ARLCINPMVVGDDLADGE 259
            ++ G+ V FPFE P+ PQ  +++ ++ AL  GKHA+LESPTGTGK+AA+LCA +AWQR  + +TG APQ+ +  RTH Q+ Q  + LK  PY P MA LGSR A LCI   V+     DG+
Sbjct:  132 NFGGVEVLFPFEQPLEPQRAVIRSVLEALTLGKHAVLESPTGTGKTAAVLCACIAWQRHRMRKTGSAPQVMFATRTHAQVRQAIRELKRTPYRPIMAVLGSREAGLCIKEEVLQSAEDDGQ 252          
BLAST of mRNA_P-littoralis_Contig121.77.2 vs. uniprot
Match: A0A7S2PA46_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PA46_9STRA)

HSP 1 Score: 114 bits (284), Expect = 9.360e-27
Identity = 60/123 (48.78%), Postives = 80/123 (65.04%), Query Frame = 0
Query:  143 GITVEFPFETPMVPQGQMMQRIIAALKSGKHALLESPTGTGKSAAMLCATLAWQRDELFRTGKAPQ---IFYGARTHTQLVQMAKTLKTLPYVPTMATLGSRARLCINPMVVGDDLADGEQLQ 262
            GI + +P+ T M PQ QM   +I AL S KH +LESPTGTGKSAA+LC+ LAWQR    ++G+  +   I Y +RTH+Q+ QM  +LK  PY P MA LGSR RLCI+  +       GE+++
Sbjct:   64 GIKIGWPYPTVMSPQRQMAFHLIKALNSSKHVVLESPTGTGKSAAILCSVLAWQRHHWKKSGEKKEKVKIIYCSRTHSQVAQMVTSLKQTPYRPRMAILGSRERLCIHKSIKPRGGGSGEEVK 186          
BLAST of mRNA_P-littoralis_Contig121.77.2 vs. uniprot
Match: A0A812U899_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812U899_9DINO)

HSP 1 Score: 120 bits (302), Expect = 1.210e-26
Identity = 64/122 (52.46%), Postives = 82/122 (67.21%), Query Frame = 0
Query:  143 GITVEFPFET-PMVPQGQMMQRIIAALKSGKHALLESPTGTGKSAAMLCATLAWQRDELFRTGKAPQIFYGARTHTQLVQMAKTLKTLPYVPTMATLGSR-ARLCINPMVVGDDLADGEQLQ 262
            G+ V FPFE  P+ PQ  +++ ++ AL  GKHA+LESPTGTGK+AA+LCA +AWQR  + +TG APQ+ Y  RTH Q+ Q  + LK  PY P MA LGSR A LCIN  V+     DG+  Q
Sbjct:  123 GVEVLFPFEKGPLEPQHAVIRNVLEALVLGKHAVLESPTGTGKTAAVLCACIAWQRHRMMKTGCAPQLMYATRTHAQVRQAVRELKRTPYRPIMAVLGSREAGLCINDEVLQSAEDDGQLRQ 244          
BLAST of mRNA_P-littoralis_Contig121.77.2 vs. uniprot
Match: A0A8J1W510_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1W510_9DINO)

HSP 1 Score: 112 bits (281), Expect = 7.280e-24
Identity = 58/126 (46.03%), Postives = 80/126 (63.49%), Query Frame = 0
Query:  125 PCDMDASLNKGNPPKSYYGITVEFPFETPMVPQGQMMQRIIAALKSGKHALLESPTGTGKSAAMLCATLAWQRDELFRTGKAPQIFYGARTHTQLVQMAKTLKTLPYVPTMATLGSRARLCINPMV 250
            P ++D +LNK + P  Y G+ + F ++  + PQ  +M  +  A+K G+HA+LESPTGTGK+AA+LCA LA QR    + G  PQI YG RT  Q+ Q+ K LK  PY P +  LGSR ++C N  V
Sbjct:  491 PHEVDQTLNKLSRPWPYEGLQIHFSYDAILQPQKLVMAAVAKAIKYGRHAVLESPTGTGKTAALLCAALAAQRFLSTKYGAHPQIIYGTRTQGQVKQVVKELKKSPYRPAVTCLGSREKICSNLQV 616          
BLAST of mRNA_P-littoralis_Contig121.77.2 vs. uniprot
Match: A0A7S1AGC0_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AGC0_NOCSC)

HSP 1 Score: 103 bits (256), Expect = 1.260e-23
Identity = 60/118 (50.85%), Postives = 73/118 (61.86%), Query Frame = 0
Query:  125 PCDMDASLNKGNPPKSYYGITVEFPFETPMVP-QGQMMQRIIAALKSGKHALLESPTGTGKSAAMLCATLAWQRDELFRTGKAPQIFYGARTHTQLVQMAKTLKTLPYVPTMATLGSR 241
            PC +D + ++ N   S  G  V+FPF  PM+P Q  ++ R + A  SG  ALL+SPTGTGKS A+L A L WQR      G APQI YG RTH QL QM   L+ +PY P MA LGSR
Sbjct:    8 PCAVDDTRSRQN--ASLAGHDVQFPF--PMLPPQTALVDRALRACDSGSIALLQSPTGTGKSIALLTAVLVWQRKAFKLHGCAPQIIYGVRTHAQLSQMVGELRKMPYSPRMAVLGSR 121          
BLAST of mRNA_P-littoralis_Contig121.77.2 vs. uniprot
Match: A0A813DPK9_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DPK9_POLGL)

HSP 1 Score: 108 bits (271), Expect = 1.440e-22
Identity = 56/103 (54.37%), Postives = 69/103 (66.99%), Query Frame = 0
Query:  145 TVEFPFETPMVPQGQMMQRIIAALKSGKHALLESPTGTGKSAAMLCATLAWQRDELFRTGKAPQIFYGARTHTQLVQMAKTLKTLPYVPTMATLGSRARLCIN 247
            T++FPF  PM PQ  + +R + A ++G  ALL+SPTGTGKS A+LCA LAWQR      G APQI YG RTH QL Q+   L+  PY P MA +GSR  +CIN
Sbjct:  166 TLQFPFP-PMHPQVALAERAVHACETGGIALLQSPTGTGKSVALLCAALAWQRRCFAERGAAPQILYGVRTHAQLSQVVGELRKTPYRPRMAVIGSRDSMCIN 267          
BLAST of mRNA_P-littoralis_Contig121.77.2 vs. uniprot
Match: A0A813DB55_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DB55_POLGL)

HSP 1 Score: 108 bits (271), Expect = 1.520e-22
Identity = 56/103 (54.37%), Postives = 69/103 (66.99%), Query Frame = 0
Query:  145 TVEFPFETPMVPQGQMMQRIIAALKSGKHALLESPTGTGKSAAMLCATLAWQRDELFRTGKAPQIFYGARTHTQLVQMAKTLKTLPYVPTMATLGSRARLCIN 247
            T++FPF  PM PQ  + +R + A ++G  ALL+SPTGTGKS A+LCA LAWQR      G APQI YG RTH QL Q+   L+  PY P MA +GSR  +CIN
Sbjct:  479 TLQFPFP-PMHPQVALAERAVHACETGGIALLQSPTGTGKSVALLCAALAWQRRCFAERGAAPQILYGVRTHAQLSQVVGELRKTPYRPRMAVIGSRDSMCIN 580          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig121.77.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEJ1_ECTSI8.210e-6880.29Helicase ATP-binding domain-containing protein n=1... [more]
A0A812QM34_SYMPI1.480e-2751.61Rtel1 protein n=1 Tax=Symbiodinium pilosum TaxID=2... [more]
A0A812ZFR4_9DINO4.930e-2750.41Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A1Q9DHK7_SYMMI6.510e-2750.41Regulator of telomere elongation helicase 1-like n... [more]
A0A7S2PA46_9STRA9.360e-2748.78Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A812U899_9DINO1.210e-2652.46Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A8J1W510_9DINO7.280e-2446.03Hypothetical protein n=1 Tax=Amoebophrya sp. A120 ... [more]
A0A7S1AGC0_NOCSC1.260e-2350.85Hypothetical protein (Fragment) n=1 Tax=Noctiluca ... [more]
A0A813DPK9_POLGL1.440e-2254.37Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A813DB55_POLGL1.520e-2254.37Hypothetical protein n=1 Tax=Polarella glacialis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010614DEAD2PFAMPF06733DEAD_2coord: 211..252
e-value: 1.7E-5
score: 24.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 155..291
e-value: 1.8E-23
score: 85.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 140..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..321
NoneNo IPR availablePANTHERPTHR11472:SF47FANCONI ANEMIA GROUP J PROTEINcoord: 140..264
IPR045028Helicase superfamily 1/2, DinG/Rad3-likePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 140..264
IPR014013Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-typePROSITEPS51193HELICASE_ATP_BIND_2coord: 143..321
score: 12.545069

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig121contigP-littoralis_Contig121:309696..316681 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig121.77.2mRNA_P-littoralis_Contig121.77.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig121 309696..316683 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig121.77.2 ID=prot_P-littoralis_Contig121.77.2|Name=mRNA_P-littoralis_Contig121.77.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=321bp
AAAAAAAAAAVSRNSTQRQKRAKTEIVLQPMPTPLPLPMQPRAARPVAFE
RHTKQFGSRFLEKYHFDGATSGARENEYVATFADRTLAGQRERGGVSGGL
GYSSAAAEAAARADREPPQRSISAPCDMDASLNKGNPPKSYYGITVEFPF
ETPMVPQGQMMQRIIAALKSGKHALLESPTGTGKSAAMLCATLAWQRDEL
FRTGKAPQIFYGARTHTQLVQMAKTLKTLPYVPTMATLGSRARLCINPMV
VGDDLADGEQLQDDDDDDAHAHAHAHAHAGRGSNSGDVHHQEPPRRRSFA
GGVMGRGRGGGGEGPSCTAGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010614DEAD_2
IPR027417P-loop_NTPase
IPR045028DinG/Rad3-like
IPR014013Helic_SF1/SF2_ATP-bd_DinG/Rad3