prot_P-littoralis_Contig120.19.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig120.19.1
Unique Nameprot_P-littoralis_Contig120.19.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length358
Homology
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BLAST of mRNA_P-littoralis_Contig120.19.1 vs. uniprot
Match: D7FSS1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSS1_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 2.100e-13
Identity = 35/76 (46.05%), Postives = 50/76 (65.79%), Query Frame = 0 
Query:   20 NSCVDPDSDDYRCQAGETTINISQCGLTEDDLGDMAACFDNTGRETVTMLLLSGNEFYTFPEDLFQGFGALEFLGI 95
            NSC+DP++D Y C+AG T IN+S CG+ ++DL D+  CFDN GR +VT + L  N F +    LF GF  ++ L +
Sbjct:   36 NSCLDPENDLYGCEAGSTEINLSNCGIGDEDLEDLVECFDNVGRASVTAIWLGSNSFTSLAAGLFDGFDNIKSLSL 111
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BLAST of mRNA_P-littoralis_Contig120.19.1 vs. uniprot
Match: A0A6H5KF25_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF25_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.330e-10
Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 0 
Query:    6 LLALVLAGTAV---NAINSCVDPDSDDYRCQA-GETTINISQCGLTEDDL--GDMAACFDNTGRETVTMLLLSGNEFYTFPEDLFQGFGALEFLGI 95
            LLA++L  TA+   +  NSC+DP   DYRC+   E T+++S+C + +DD+  GD+AAC D  GRE+V  L L  N+  T P+ +F    A+E L I
Sbjct:   37 LLAVLLGPTALLGTSKANSCLDPTDTDYRCEIDAEGTLDLSECLIADDDVDSGDLAACLDAAGRESVIFLDLGRNDLTTLPDGVFLDLTAMETLHI 132
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BLAST of mRNA_P-littoralis_Contig120.19.1 vs. uniprot
Match: D7G7X7_ECTSI (ATP binding / amino acid binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X7_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 3.080e-9
Identity = 39/96 (40.62%), Postives = 60/96 (62.50%), Query Frame = 0 
Query:    6 LLALVLAGTAV---NAINSCVDPDSDDYRCQA-GETTINISQCGLTEDDL--GDMAACFDNTGRETVTMLLLSGNEFYTFPEDLFQGFGALEFLGI 95
            LLA+++  TA+   +  NSC+DP   DYRC+   E T+++S+C + +DD+  GD+AAC D  GRE+V  L L  N+  T P+ +F    ++E L I
Sbjct:   45 LLAVLVGLTALLSTSEANSCLDPTDTDYRCEIDAEGTLDLSECLVADDDVDSGDLAACLDAAGRESVIFLDLGRNDLTTLPDGVFLDLTSMETLHI 140
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BLAST of mRNA_P-littoralis_Contig120.19.1 vs. uniprot
Match: D8LR92_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR92_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 4.290e-7
Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = 0 
Query:   20 NSCVDPDSDDYRCQAGETTINISQCGLTEDDLGDMAACFDNTGRETVTMLLLSGNEFYTFPEDLFQGFGALE 91
            N+C+DP S+ Y C    T ++++ CG+T+D+L ++AAC D  GR+ V  + L  N   TF  DLF G   +E
Sbjct:  394 NTCLDPASEHYVCGMPGTELDLAYCGITDDNLEELAACMDVFGRDAVKEVRLGYNYLTTFSGDLFHGLTHVE 465
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BLAST of mRNA_P-littoralis_Contig120.19.1 vs. uniprot
Match: D7FSR9_ECTSI (Hypothetical leucine rich repeat protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR9_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 2.220e-6
Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 0 
Query:   29 DYRCQAGETTINISQCG--LTEDDLGDMAACFDNTGRETVTMLLLSGNEFYTFPEDLFQGFGALE 91
            D+R Q    T+    CG  LT+ D+ D+AACFDNTGR +VT + LSGN+  + P  LF G  AL+
Sbjct:   55 DWRSQR---TLTEDSCGDGLTDSDVDDVAACFDNTGRTSVTKIDLSGNQLASLPAGLFNGLDALQ 116
[Close]
BLAST of mRNA_P-littoralis_Contig120.19.1 vs. uniprot
Match: D7FY01_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY01_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 9.360e-5
Identity = 35/93 (37.63%), Postives = 49/93 (52.69%), Query Frame = 0 
Query:    2 RAFGLLALVLAGTAVNAINSCVDPDSDDYRCQAG-----ETTINISQCGLTEDDLGDMAACFDNTGRE----TVTMLLLSGNEFYTFPEDLFQ 85
            RA  +LA +     V A NSC+DP+S DYRC A      ++T+++  CGLT+DD  D+  C    G +    +V  L L  N   T P + FQ
Sbjct:    7 RALSVLAPL---AVVQAKNSCLDPNSSDYRCGAAIVAKEQSTLSLVGCGLTDDDFDDLEVC-TTVGSQLQDPSVEQLDLYNNTLTTLPGEFFQ 95
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig120.19.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FSS1_ECTSI2.100e-1346.05Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KF25_9PHAE2.330e-1042.71Protein kinase domain-containing protein n=1 Tax=E... [more]
D7G7X7_ECTSI3.080e-940.63ATP binding / amino acid binding / protein kinase/... [more]
D8LR92_ECTSI4.290e-740.28Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
D7FSR9_ECTSI2.220e-647.69Hypothetical leucine rich repeat protein (Partial)... [more]
D7FY01_ECTSI9.360e-537.63Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 111..139
e-value: 130.0
score: 4.2
coord: 260..283
e-value: 0.0085
score: 25.3
coord: 213..236
e-value: 30.0
score: 9.3
coord: 140..163
e-value: 2.3E-4
score: 30.5
coord: 188..212
e-value: 0.038
score: 23.1
coord: 67..86
e-value: 180.0
score: 2.9
coord: 164..187
e-value: 0.0011
score: 28.3
coord: 87..110
e-value: 7.0
score: 14.5
coord: 237..259
e-value: 80.0
score: 5.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 36..199
e-value: 1.4E-35
score: 124.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 200..327
e-value: 3.7E-22
score: 80.3
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 215..273
e-value: 2.5E-9
score: 36.8
coord: 142..200
e-value: 2.7E-15
score: 55.9
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 142..163
score: 7.065096
NoneNo IPR availablePANTHERPTHR24373:SF345SUBFAMILY NOT NAMEDcoord: 130..222
coord: 170..296
coord: 66..173
NoneNo IPR availablePANTHERPTHR24373SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEINcoord: 130..222
coord: 170..296
coord: 66..173
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 65..296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig120contigP-littoralis_Contig120:168300..175541 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig120.19.1mRNA_P-littoralis_Contig120.19.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig120 166404..200808 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig120.19.1 ID=prot_P-littoralis_Contig120.19.1|Name=mRNA_P-littoralis_Contig120.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=358bp
MRAFGLLALVLAGTAVNAINSCVDPDSDDYRCQAGETTINISQCGLTEDD
LGDMAACFDNTGRETVTMLLLSGNEFYTFPEDLFQGFGALEFLGIWENGL
ADLPSGIFQGLVQLEHLAISNNGMPTPGFTTLDIELFSGLENLEYLGLSG
NSITTLPVGIFGDLVSLQWLDLGFNELTSVDAGLFDGLVSLTRLRLSSNN
AITTLPPGIFDDLGQLEYLIISSLSLTSLDSGVFDKLEYLTELNLARNSL
TLQADIFDGLTNLADLWLDGNDFTTLPAGLFDDLVNLEFLSILNNDDLQC
LPSIPECDDCDLALQSDVDEDGVCECPVYGACSGCQPGVDGYACDDDMSF
SYVYIEW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt