prot_P-littoralis_Contig12.174.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig12.174.2
Unique Name	prot_P-littoralis_Contig12.174.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	340

Homology

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BLAST of mRNA_P-littoralis_Contig12.174.2 vs. uniprot
Match: D7FKP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKP8_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 3.290e-52
Identity = 146/312 (46.79%), Postives = 179/312 (57.37%), Query Frame = 0

Query:    1 MSSVSKLSSHFTRRRE--PSCTSPEE---SSEKPSTSVRARLEKKLQVRQKTGFTFNFAIDRDADDVQEGEVCGRGNSGERGSFRFDFNPTNTTVGAGTSKESKL-RGSGGSANPRAVGDFVVETETRRSQPNGKKKTKKKRVXXXXXXXKRNDKPTEHGLEGFA------GKQQPQATTPPAAAAPSTLVAGGNETNDSP--RLTAARDFD--PKRDPAQELVELNEVGEKTAPETLRPPPGFTLESWKDPALSGEERRRRRFGSGVRNMAAIQRSCYARRALVADGELETVESPARHGG-LIRPDRNRVR 295
            MS+   LSS+FT+RRE   S   PEE    S   S SVRARLEKKLQV+QKTGF FNFA+D DAD+ ++G     G++GERGSF F+FNP + +      + +   R SG +++ RA  DF+   E   +QP+GKKK      XXXXXXX       +   E  +      G +Q      P  +   T+  GG E   S    L AA   D  PKR+  Q             P  LRPPPGFTLESWKDPA++GEERRRRRFGSGVRNM AIQRSC ARR L+ DGE+   + P R GG L RP  +R R
Sbjct:    1 MSTTGTLSSYFTKRREVKSSRAGPEELHVDSSSSSGSVRARLEKKLQVKQKTGFAFNFAVDSDADEQRQGGGQEGGDAGERGSFCFNFNPADASAPTCVPESNGAKRRSGDASSLRAAQDFLTVVEKSGAQPSGKKKRTGXXXXXXXXXXXXGKGEAQQSREQKSQDPVGEGPEQDNVVDCPTFSGHCTVGDGGGEATSSAVASLPAAXXXDSSPKREHRQR------------PPGLRPPPGFTLESWKDPAITGEERRRRRFGSGVRNMVAIQRSCDARRGLIPDGEVGEEKLPERQGGGLGRPGCDRAR 300

[Close]

BLAST of mRNA_P-littoralis_Contig12.174.2 vs. uniprot
Match: A0A836CBN0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN0_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.240e-5
Identity = 30/57 (52.63%), Postives = 38/57 (66.67%), Query Frame = 0

Query:  226 PGFTLESWKDPALSGEERRRRRFGSGVRNMAAIQRSCYARRALVAD--GELETVESP 280
            PG +LESWKDP L+  ERR+ R+GSGVRN+AAIQR   A  A  +   G+ E  + P
Sbjct:  122 PGLSLESWKDPTLTEAERRKLRYGSGVRNIAAIQRRTKAVGAATSQEPGDAEPPQQP 178

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig12.174.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig12.174.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FKP8_ECTSI	3.290e-52	46.79	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A836CBN0_9STRA	1.240e-5	52.63	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..102

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig12	contig	P-littoralis_Contig12:728127..753903 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig12.174.2	mRNA_P-littoralis_Contig12.174.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig12 727552..753981 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig12.174.2 ID=prot_P-littoralis_Contig12.174.2|Name=mRNA_P-littoralis_Contig12.174.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=340bp
MSSVSKLSSHFTRRREPSCTSPEESSEKPSTSVRARLEKKLQVRQKTGFT
FNFAIDRDADDVQEGEVCGRGNSGERGSFRFDFNPTNTTVGAGTSKESKL
RGSGGSANPRAVGDFVVETETRRSQPNGKKKTKKKRVGKKKKGGKRNDKP
TEHGLEGFAGKQQPQATTPPAAAAPSTLVAGGNETNDSPRLTAARDFDPK
RDPAQELVELNEVGEKTAPETLRPPPGFTLESWKDPALSGEERRRRRFGS
GVRNMAAIQRSCYARRALVADGELETVESPARHGGLIRPDRNRVRRFLLS
ALTSAYHSTAAARYSISRDVYDARNLSRVDYCRVKHLFY*