prot_P-littoralis_Contig12.108.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig12.108.1
Unique Nameprot_P-littoralis_Contig12.108.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length290
Homology
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BLAST of mRNA_P-littoralis_Contig12.108.1 vs. uniprot
Match: D7G670_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G670_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 3.540e-92
Identity = 177/304 (58.22%), Postives = 199/304 (65.46%), Query Frame = 0 
Query:    1 MALESSVLGCGSDDWSVDSDYAFQGFADDIKQHQDKQ-RGEPFPQPL----APTLDRSDAPNSLKPSSADAVASPENNLNTGSTSLLHGPPTKAREAEATGQMATVAEGEGVASGRMLVLEYGEM--AREDTKDERLGGGNPPNPLMCNTRLFVDPGSSTDSAHILRLEQRMFLKAAFQLLEERDRLFPASIGSWSNGGAG------VPMGGGGSNLRDHRGVFVNGSAITAGKTGEGVRFQFQ-HESGNTMNRPRLLMSGTLRKATARSVGRLGKTTWKTKYVELTPGSFAYSDNGPTVLGKR 290
            +ALESSVLGCGSDDWSVDSDYAFQ FADD+K HQ +Q R E   Q L    +PT +RS  PN   P +   V S ++N     T+ LH  P  A  A A     T    +          E GE+  +R  +  E  G  N  +P++ NTRLF DPGSS+DS HILRLEQRMFLKAAFQLLEERDRLFPASIGSW   G G             SNLRD RG +VNG A++AGK GEG RF FQ HE     NRPR+L SGTLRKATARSVGRL KTTWKTKYVELTPGSFAYSDNGP V+GKR
Sbjct:    2 IALESSVLGCGSDDWSVDSDYAFQDFADDVKHHQQQQARHEKSEQNLLQSSSPTRERSAVPNPGTPINKRVVGSLDDNSRA-ETTELHEHPEAAEGARA--DTLTAGGAQAXXXXXXXXPEEGEVGGSRRGSASE-AGKDNRHHPVLSNTRLFGDPGSSSDSTHILRLEQRMFLKAAFQLLEERDRLFPASIGSWGTAGGGWVXXXXXXXXXXXSNLRDRRGGYVNGGAVSAGKAGEGARFHFQQHEPNFYANRPRILKSGTLRKATARSVGRLEKTTWKTKYVELTPGSFAYSDNGPIVIGKR 301
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BLAST of mRNA_P-littoralis_Contig12.108.1 vs. uniprot
Match: A0A6H5KYB1_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB1_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 6.620e-50
Identity = 96/132 (72.73%), Postives = 102/132 (77.27%), Query Frame = 0 
Query:  165 MFLKAAFQLLEERDRLFPASIGSWSNGGAG-VPMGGGG-----SNLRDHRGVFVNGSAITAGKTGEGVRFQFQ-HESGNTMNRPRLLMSGTLRKATARSVGRLGKTTWKTKYVELTPGSFAYSDNGPTVLGK 289
            MFLKAAFQLLEERDRLFPASIGSW     G VP          SNLRD RG +VNG+A++AGK GEG RF FQ HE     NRPR+L SGTLRKATARSVGRL KTTWKTKYVELTPGSFAYSDNGP V+GK
Sbjct:    1 MFLKAAFQLLEERDRLFPASIGSWGTAAGGWVPXXXXXXXXXXSNLRDQRGGYVNGAAVSAGKAGEGPRFHFQQHEPTFYANRPRILKSGTLRKATARSVGRLEKTTWKTKYVELTPGSFAYSDNGPIVIGK 132
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G670_ECTSI3.540e-9258.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYB1_9PHAE6.620e-5072.73PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig12contigP-littoralis_Contig12:483973..485297 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig12.108.1mRNA_P-littoralis_Contig12.108.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig12 483970..485297 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig12.108.1 ID=prot_P-littoralis_Contig12.108.1|Name=mRNA_P-littoralis_Contig12.108.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=290bp
MALESSVLGCGSDDWSVDSDYAFQGFADDIKQHQDKQRGEPFPQPLAPTL
DRSDAPNSLKPSSADAVASPENNLNTGSTSLLHGPPTKAREAEATGQMAT
VAEGEGVASGRMLVLEYGEMAREDTKDERLGGGNPPNPLMCNTRLFVDPG
SSTDSAHILRLEQRMFLKAAFQLLEERDRLFPASIGSWSNGGAGVPMGGG
GSNLRDHRGVFVNGSAITAGKTGEGVRFQFQHESGNTMNRPRLLMSGTLR
KATARSVGRLGKTTWKTKYVELTPGSFAYSDNGPTVLGKR
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