prot_P-littoralis_Contig119.35.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig119.35.2
Unique Nameprot_P-littoralis_Contig119.35.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length271
Homology
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BLAST of mRNA_P-littoralis_Contig119.35.2 vs. uniprot
Match: D7FY24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY24_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 2.260e-28
Identity = 72/165 (43.64%), Postives = 79/165 (47.88%), Query Frame = 0 
Query:   36 AVERGLRAVTRGIRVAEKLKADIVISAAGGTCAFQVHTNFSHGHVVEAAGRAEGLAGTFERCYVLLVRPNTDALRNFQLQLSPACDARPLLVPSEEETLSEVRRVSQGVLRATSKSQRREYYKQLHQQLRLDQPHRNILAELLRGLGVPEWRHEADLLLDAFGSI 200
            A+ERGLRAV RG RV+  +KAD+VIS  GGTCAFQ+HTNFSHGHV EA                                                                            LHQ+LRLD PHR ILAELLRGLGVP+WR EADLLLDAFGSI
Sbjct:    4 ALERGLRAVARGTRVSGTIKADVVISTGGGTCAFQLHTNFSHGHVAEA----------------------------------------------------------------------------LHQKLRLDHPHRGILAELLRGLGVPDWRQEADLLLDAFGSI 92
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig119.35.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FY24_ECTSI2.260e-2843.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig119contigP-littoralis_Contig119:209277..217030 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig119.35.2mRNA_P-littoralis_Contig119.35.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig119 209240..217526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig119.35.2 ID=prot_P-littoralis_Contig119.35.2|Name=mRNA_P-littoralis_Contig119.35.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=271bp
MMETHGGASTASVAGTAGDDISTAIAIIHPRMRGTAVERGLRAVTRGIRV
AEKLKADIVISAAGGTCAFQVHTNFSHGHVVEAAGRAEGLAGTFERCYVL
LVRPNTDALRNFQLQLSPACDARPLLVPSEEETLSEVRRVSQGVLRATSK
SQRREYYKQLHQQLRLDQPHRNILAELLRGLGVPEWRHEADLLLDAFGSI
RGVCLQPLSALLADCPVAGETARTLHDFINEKPSRPLPCAMCPGVMGGCS
LLPPPPPPSPPSPPSPPLPP*
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