prot_P-littoralis_Contig1170.5.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1170.5.1
Unique Nameprot_P-littoralis_Contig1170.5.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length254
Homology
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BLAST of mRNA_P-littoralis_Contig1170.5.1 vs. uniprot
Match: A0A6H5L639_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L639_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 3.660e-8
Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 0 
Query:  159 IIANTVSADDIPKESKRRRLELE-RNAKICVVD-----DGALSRSSDSTSATPTSVPH--LLSAGLGTILLSKMIDLRSVKQLQLSCSSVCADCREWTGFHVRV 254
            ++      +DIP +++RR   L  R  K C        DG+ SR  ++  AT +  P   LLSA L  +LLS+++ +  +KQLQL+ SS+C DCRE T FHV V
Sbjct:   39 LVTPAPDVEDIPLKNRRRSQRLSSRRMKTCARVGGTGVDGSESRDDNANIATNSRTPTRPLLSAALRIVLLSELVPVTIIKQLQLASSSICGDCRELTEFHVNV 142
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1170.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L639_9PHAE3.660e-839.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1170contigP-littoralis_Contig1170:21430..24135 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1170.5.1mRNA_P-littoralis_Contig1170.5.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1170 21428..24135 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1170.5.1 ID=prot_P-littoralis_Contig1170.5.1|Name=mRNA_P-littoralis_Contig1170.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=254bp
RLATTLNRTHDTIGSRWCCLNLFVVAMGLVNSSPSANAATLTTNEELRLR
EELAPLPPSSSSSSLLNERGRSHASHPVVAAVSSADGISKISKSQRLELA
NNVTICAAGDGNGRLSANDANLTTNQELPSREKLVPLRPSPSSFSLLNER
GEFHASYPIIANTVSADDIPKESKRRRLELERNAKICVVDDGALSRSSDS
TSATPTSVPHLLSAGLGTILLSKMIDLRSVKQLQLSCSSVCADCREWTGF
HVRV
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