prot_P-littoralis_Contig114.11.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig114.11.2
Unique Nameprot_P-littoralis_Contig114.11.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length85
Homology
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BLAST of mRNA_P-littoralis_Contig114.11.2 vs. uniprot
Match: A0A6H5K0K8_9PHAE (NADH-u_ox-rdase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0K8_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 1.420e-43
Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 0 
Query:    1 MAFEDPKFPVTDPAPGMSTVYGNLNATDLATITLATAGSAAWCFKGAVKGIRGPNAVVGGALGLFGGLLLAGQSSFGRLTGQRK 84
            MAFEDPKFPVTDPAPGM TV+GNLNATD+AT+ +ATAGSAAWCFKG VKGIRGPNAVVG +LGL GGL+LAGQSSFGRLTGQRK
Sbjct:    1 MAFEDPKFPVTDPAPGMGTVFGNLNATDVATVVVATAGSAAWCFKG-VKGIRGPNAVVGASLGLIGGLMLAGQSSFGRLTGQRK 83
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BLAST of mRNA_P-littoralis_Contig114.11.2 vs. uniprot
Match: A0A7S0WTB3_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WTB3_9CHLO)

HSP 1 Score: 53.1 bits (126), Expect = 3.870e-7
Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 0 
Query:    4 EDPKFPVTDPAPGMSTVYGNLNATDLATITLATAGSAAW-CFKG-AVKGIRGPNAVVGGALGLFGGLLLAGQSSFGRLTG 81
            ++PK+ V D APG++  +GN +  D+     AT  +  + C  G  VKG+ GP+A +G A+G+  G LLA Q+S GRL G
Sbjct:    6 DEPKYKVIDSAPGLAKCFGNCSFEDMKIAAGATFAATTYGCLAGKGVKGMAGPSAYMGLAIGVTAGALLAYQNSAGRLMG 85
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig114.11.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0K8_9PHAE1.420e-4386.90NADH-u_ox-rdase domain-containing protein n=2 Tax=... [more]
A0A7S0WTB3_9CHLO3.870e-741.25Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019721NADH-ubiquinone oxidoreductase, 21kDa subunit, N-terminalPFAMPF10785NADH-u_ox-rdasecoord: 6..83
e-value: 2.4E-9
score: 37.7
NoneNo IPR availablePANTHERPTHR34062OXIDOREDUCTASE 21 KDA SUBUNIT, PUTATIVE (AFU_ORTHOLOGUE AFUA_4G04750)-RELATEDcoord: 5..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig114contigP-littoralis_Contig114:39164..39756 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig114.11.2mRNA_P-littoralis_Contig114.11.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig114 39164..39756 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig114.11.2 ID=prot_P-littoralis_Contig114.11.2|Name=mRNA_P-littoralis_Contig114.11.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=85bp
MAFEDPKFPVTDPAPGMSTVYGNLNATDLATITLATAGSAAWCFKGAVKG
IRGPNAVVGGALGLFGGLLLAGQSSFGRLTGQRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019721NADH-UbQ_OxRdtase_su21_N