prot_P-littoralis_Contig113.66.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig113.66.3
Unique Nameprot_P-littoralis_Contig113.66.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length638
Homology
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BLAST of mRNA_P-littoralis_Contig113.66.3 vs. uniprot
Match: A0A6H5K2D9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2D9_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 7.260e-11
Identity = 175/408 (42.89%), Postives = 200/408 (49.02%), Query Frame = 0 
Query:  221 TSEHLWQLASAATRKRLQALSGDLEARSIKLDRKLRDAKRRKPSKNXXXXXXXXXXSRVDGVRAQQQGGKGPGRRSEGKALNERNGGAAACDANGAGTXXXXXXXXXXXXXXXXKSERVKALNVDSRAIRDLHRSLDEMLGDWD-----REEKSGFEPCPSLNASSSKCSTRGLAAPVPPHVQRAANPPLESSAGKAGPSVSAYSPGGGRGGAADRYSADAGAWLSGGGXXXXXXXXXXXXXAPNSGLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANAAGGGDRMAS-------LSRSLPQGNSSCVGGSPNNNSLYGVSSL-DLGTHCFPPPLPRPTLGVVQEARAFAPGQHLAVLQALLN---GEEGQGDQGFHSDSDSE 612
            +++ LW+LAS AT+KR Q LS DLE R  +LDR+LRDAKRR+PS    XXXXXXXX                                          XXXXXXXXXXXXXXX KSE VKAL+ DS A++D+H+ +D ML DWD      E  +  + CP L+ + S     G   PVP         P  + A KA  S        G G                  XXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXXXX                        +A  GG   A         SR LP  +S   GGS         SS+ + GT CFPPPLP P+      A   AP QHLAVLQALLN   GEEG    G +SDSDSE
Sbjct:   85 SNDELWRLASTATKKRFQILSQDLETRRARLDRRLRDAKRRRPSSKTGXXXXXXXXXXXXXXXXXXX-------------------------------XXXXXXXXXXXXXXXAKSEHVKALSADSHALQDVHQLIDTMLSDWDVKITGDEGPAVVDSCPPLSTAPSANRRGGAPPPVPA--------PFPTPAMKASLS--------GVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCNSPGDPALGTSPRDSNISKKDHDSAGRGGGTAAEGRRAECPTSRYLPHNSSRSRGGSSTTAKAAAPSSVPNPGTRCFPPPLPIPS-----GAGGVAPAQHLAVLQALLNEGGGEEG----GSYSDSDSE 436
[Close]
BLAST of mRNA_P-littoralis_Contig113.66.3 vs. uniprot
Match: D8LD74_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD74_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 3.680e-9
Identity = 80/174 (45.98%), Postives = 96/174 (55.17%), Query Frame = 0 
Query:  214 KGEERNMTSEHLWQLASAATRKRLQALSGDLEARSIKLDRKLRDAKRRKPSKNXXXXXXXXXXSRVDGVRAQQQGGKGPGRRSEGKALNERNGGAAACDANGAGTXXXXXXXXXXXXXXXXKSERVKALNVDSRAIRDLHRSLDEMLGDWD-----REEKSGFEPCPSLNASSS 382
            KG E N+TS+ LW+LAS AT+KR Q LS DLE R  +LDR+LRD KRR     XXXXXXXXXX                                          XXXXXXXXXXXXXXXXK ERVK L+ DS A++D+H+ +D ML DWD      E  +  +P P L+ +SS
Sbjct:    6 KGAEENLTSDELWRLASTATKKRFQILSQDLETRRARLDRRLRDEKRRXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------XXXXXXXXXXXXXXXXKRERVKGLSADSHALQDVHQLIDTMLTDWDVKITGDEGPAVVDPSPPLSTASS 148
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig113.66.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K2D9_9PHAE7.260e-1142.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD74_ECTSI3.680e-945.98Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 473..506
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 530..550
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..550
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 603..623
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 595..637
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig113contigP-littoralis_Contig113:289896..293802 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig113.66.3mRNA_P-littoralis_Contig113.66.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig113 280541..294331 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig113.66.3 ID=prot_P-littoralis_Contig113.66.3|Name=mRNA_P-littoralis_Contig113.66.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=638bp
MTFPEDWDLFWVLVCGICISGFALSVAGCIGVTREKTKALHPATHEQQQL
IINSGSNQSSSSSSSSSSSGSGSGSGSGSGESSGVVTAATTDNPEVLVAR
EKQARGRVAVSSANPTRHVPSVHSCGILDVDAGDGPPTQQQQQPQQPQQQ
QGQQPQQQSARTCRNPSEGKSKGRAGTALDSEEGGERGSAEEKYTVQHIF
ESFDNLSELLGLKKGEERNMTSEHLWQLASAATRKRLQALSGDLEARSIK
LDRKLRDAKRRKPSKNSAAAAAAAASSRVDGVRAQQQGGKGPGRRSEGKA
LNERNGGAAACDANGAGTAVAAAASAAAAAVAVAKSERVKALNVDSRAIR
DLHRSLDEMLGDWDREEKSGFEPCPSLNASSSKCSTRGLAAPVPPHVQRA
ANPPLESSAGKAGPSVSAYSPGGGRGGAADRYSADAGAWLSGGGGRSGGG
AARGSRSAPNSGLAAASRSPAAGGGGSRSNKNNGENSSSGRSSSGVGSST
GSRSHGKCRSDGAAADANAAGGGDRMASLSRSLPQGNSSCVGGSPNNNSL
YGVSSLDLGTHCFPPPLPRPTLGVVQEARAFAPGQHLAVLQALLNGEEGQ
GDQGFHSDSDSEREEETGSGGRALVGEREEGVVGSSM*
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