prot_P-littoralis_Contig11.173.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig11.173.1
Unique Name	prot_P-littoralis_Contig11.173.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	580

Homology

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BLAST of mRNA_P-littoralis_Contig11.173.1 vs. uniprot
Match: A0A6H5JQ54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ54_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 1.880e-55
Identity = 343/505 (67.92%), Postives = 372/505 (73.66%), Query Frame = 0

Query:   49 RAAVVSGWLPLSDVLVLQLASVATCIDCRETQKPVQVNVAKRTPVTLWSNERPRRAPGRFSNTDECVNNSVLRGGKSTGGDDSGTSRGSGGGTSRNGGTDSGSSTSRVPRPTIAAVVWTRASPCPDLYRELPSEARRVTFGSNFNQPVTGIEWPHGLEEXXXXXXXXXXXXXXXXXXXXXXLSFVDASSXXXXXXXXXXXXXXXXXXXXXXXXXNLSGKGTSTAVDEEEDEGDKVQWPSTLERITLRSYRRDLAGVSWPPGLRALTIDGGFDLTIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHLALNSDVFNRPVEGVAWPECMTELYFGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGLQEVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLEVLDLGDCHMKWGYGPKEGYESWSPRLRIISRKNLGSLGWQRK 553
            RAA  SGWLP +D++ LQLAS+A C+ CR  QKPV VNVAKRTP TLWS +RPR A     + DE              GD SG + G                 SRVPRPTI A+ W RASPC  L  +LPSEA+R+TFGSNFN  + GI WP GLEEXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXX         + D+ ++ G  V+WPSTLERI L SYRR L GVSWPPG               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +  +++S VFN PV GV+WP+ MT+L+FGD  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     LDLG CHM WG GPKEGYE+WSPRL IISRK + +LGWQRK
Sbjct:   18 RAAAASGWLPFADLITLQLASLAMCVICRHAQKPVLVNVAKRTPKTLWSIDRPRIAHESTDSADE--------------GDGSGGAPGF---------------ASRVPRPTIEAISWIRASPCSALRDKLPSEAKRLTFGSNFNHTLVGIRWPEGLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-----HSTDKVKEGG--VRWPSTLERIALGSYRRSLTGVSWPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSQFSIDSKVFNYPVSGVSWPDFMTDLHFGDGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXTLDLGHCHMTWGCGPKEGYENWSPRLEIISRKRISTLGWQRK 485

[Close]

BLAST of mRNA_P-littoralis_Contig11.173.1 vs. uniprot
Match: D7FU94_ECTSI (Proline dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU94_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 4.360e-43
Identity = 161/278 (57.91%), Postives = 180/278 (64.75%), Query Frame = 0

Query:   38 RRRWRGRDGAFRAAVVSGWLPLSDVLVLQLASVATCIDCRETQKPVQVNVAKRTPVTLWSNERPRRAPGRFSNTDECVNNSVLRGGKSTGGDDSGTSRGSGGGTSRNGGTDSGSSTSRVPRPTIAAVVWTRASPCPDLYRELPSEARRVTFGSNFNQPVTGIEWPHGLEEXXXXXXXXXXXXXXXXXXXXXXLSFVDASSXXXXXXXXXXXXXXXXXXXXXXXXXNLSGKGTSTAVDEEEDEGDKVQWPSTLERITLRSYRRDLAGVSWPPGLRALTI 315
            RRR R RD   RAA  SGWLP +D++  QLAS+A C+ CR  QKPV VNVAKRTP TLWS +RPR A     + DE              G+ SG + G                 SRVPRPTI A+ W RASPCP L  +LPSEA+R+ FGSNFN  V GI WP GLEEXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXX          + D+ ++ G  V+WPSTLERITL SYRR L GVSWPPGL AL +
Sbjct:   17 RRRCR-RDAGLRAAAASGWLPFADLITFQLASLAMCVICRHAQKPVLVNVAKRTPKTLWSIDRPRIAHESTDSADE--------------GEGSGGAPGF---------------ASRVPRPTIEAISWIRASPCPALRDKLPSEAKRLAFGSNFNHTVVGIRWPEGLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLP----VQDSTDKVKEGG--VRWPSTLERITLGSYRRSLTGVSWPPGLLALVL 258

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig11.173.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig11.173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JQ54_9PHAE	1.880e-55	67.92	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FU94_ECTSI	4.360e-43	57.91	Proline dehydrogenase n=1 Tax=Ectocarpus siliculos...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008615	FNIP	PFAM	PF05725	FNIP	coord: 341..383 e-value: 2.6E-8 score: 33.9 coord: 475..517 e-value: 2.4E-4 score: 21.2 coord: 385..428 e-value: 1.1E-4 score: 22.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 551..579
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 553..579
None	No IPR available	PANTHER	PTHR32134:SF153	SUBFAMILY NOT NAMED	coord: 286..456
None	No IPR available	PANTHER	PTHR32134:SF153	SUBFAMILY NOT NAMED	coord: 373..516
None	No IPR available	PANTHER	PTHR32134:SF153	SUBFAMILY NOT NAMED	coord: 178..402
None	No IPR available	PANTHER	PTHR32134	UNCHARACTERIZED	coord: 178..402
None	No IPR available	PANTHER	PTHR32134	UNCHARACTERIZED	coord: 373..516 coord: 286..456
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 184..521

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig11	contig	P-littoralis_Contig11:915083..929398 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig11.173.1	mRNA_P-littoralis_Contig11.173.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig11 914949..930369 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig11.173.1 ID=prot_P-littoralis_Contig11.173.1|Name=mRNA_P-littoralis_Contig11.173.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=580bp
MDVYQAASKMPEESAPAADSISVGSAGAVIMTVNAELRRRWRGRDGAFRA
AVVSGWLPLSDVLVLQLASVATCIDCRETQKPVQVNVAKRTPVTLWSNER
PRRAPGRFSNTDECVNNSVLRGGKSTGGDDSGTSRGSGGGTSRNGGTDSG
SSTSRVPRPTIAAVVWTRASPCPDLYRELPSEARRVTFGSNFNQPVTGIE
WPHGLEEIDFGSKFTHPIAGATWPASLKKLSFVDASSFDQPLVGVTWPEG
LKEISFGANFNQNLSGKGTSTAVDEEEDEGDKVQWPSTLERITLRSYRRD
LAGVSWPPGLRALTIDGGFDLTIDGINLPDGLEELDISSDFNHPINGVAF
PTGLKVLTFGNRFNQAIDQTAFPAGLEKLTFGLSFDQPLERVELPASLTH
LALNSDVFNRPVEGVAWPECMTELYFGDAFNQEVSSMAWPAGLVRLVFGD
RFNKSVQGLGWPSKGLQEVRFGHNFNQPVESVVWPRSLKLLHFGARFKQC
LSGAAWPSGLEVLDLGDCHMKWGYGPKEGYESWSPRLRIISRKNLGSLGW
QRKGRDGSNSSGRNSSNGRPSTITVDNCP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008615	FNIP