prot_P-littoralis_Contig106.114.1 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig106.114.1 vs. uniprot
Match: D8LJI3_ECTSI (U6 snRNA-associated Sm-like protein LSm5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJI3_ECTSI) HSP 1 Score: 166 bits (419), Expect = 6.350e-52 Identity = 82/84 (97.62%), Postives = 84/84 (100.00%), Query Frame = 0
Query: 1 MAARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEMDADGTKRKIQLDQILLNGNNVAMLVPGGSPED 84
MAARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYE+DADGTKR+IQLDQILLNGNNVAMLVPGGSPED
Sbjct: 1 MAARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEVDADGTKRRIQLDQILLNGNNVAMLVPGGSPED 84
BLAST of mRNA_P-littoralis_Contig106.114.1 vs. uniprot
Match: A0A835ZDD9_9STRA (U6 snRNA-associated Sm-like protein LSm5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDD9_9STRA) HSP 1 Score: 147 bits (372), Expect = 9.160e-45 Identity = 69/83 (83.13%), Postives = 81/83 (97.59%), Query Frame = 0
Query: 1 MAARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEMDADGTKRKIQLDQILLNGNNVAMLVPGGSPE 83
MA RL+PLELIDKCIGS+LWIIMKGDKELVGTLRGFDDYVNMVL+DVTEYE+DA+G +R+++L+QILLNGNNVA+LVPGGSP+
Sbjct: 1 MAGRLMPLELIDKCIGSKLWIIMKGDKELVGTLRGFDDYVNMVLEDVTEYEVDAEGVRREVKLEQILLNGNNVALLVPGGSPD 83
BLAST of mRNA_P-littoralis_Contig106.114.1 vs. uniprot
Match: A0A067CXC5_SAPPC (U6 snRNA-associated Sm-like protein LSm5 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CXC5_SAPPC) HSP 1 Score: 138 bits (347), Expect = 6.910e-41 Identity = 67/80 (83.75%), Postives = 74/80 (92.50%), Query Frame = 0
Query: 4 RLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEMDADGTKRKIQLDQILLNGNNVAMLVPGGSPE 83
RLLPLELIDKCIGSR+WIIMKGDKE VGTLRGFDDYVNMVLDDVTEYE+ +G KRK+ +DQ+LLNGNNV +LVPGGSPE
Sbjct: 5 RLLPLELIDKCIGSRMWIIMKGDKEFVGTLRGFDDYVNMVLDDVTEYEVTPEG-KRKVHVDQVLLNGNNVCLLVPGGSPE 83
BLAST of mRNA_P-littoralis_Contig106.114.1 vs. uniprot
Match: A0A024UWN5_9STRA (U6 snRNA-associated Sm-like protein LSm5 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UWN5_9STRA) HSP 1 Score: 135 bits (341), Expect = 5.520e-40 Identity = 65/81 (80.25%), Postives = 75/81 (92.59%), Query Frame = 0
Query: 4 RLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEMDADGTKRKIQLDQILLNGNNVAMLVPGGSPED 84
RLLPLELIDKCIGSR+WIIMKGDKE VGTLRGFDDYVNMVLDDV EYE+ +G KRK+++DQ+LLNGNNV +LVPGG+PE+
Sbjct: 6 RLLPLELIDKCIGSRIWIIMKGDKEFVGTLRGFDDYVNMVLDDVIEYEITPEG-KRKVKVDQVLLNGNNVCLLVPGGNPEE 85
BLAST of mRNA_P-littoralis_Contig106.114.1 vs. uniprot
Match: A0A024G4D3_9STRA (U6 snRNA-associated Sm-like protein LSm5 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G4D3_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.060e-39 Identity = 64/82 (78.05%), Postives = 74/82 (90.24%), Query Frame = 0
Query: 4 RLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEMDADGTKRKIQLDQILLNGNNVAMLVPGGSPEDA 85
R+LPLELIDKCIGSRLWI+M+GDKE VGTLRGFDDYVNMVLDDVTE+E+ G KR+ +LDQ+LLNGNNV ML+PGG PED+
Sbjct: 5 RVLPLELIDKCIGSRLWIVMQGDKEFVGTLRGFDDYVNMVLDDVTEFELTPSG-KRQTELDQVLLNGNNVCMLIPGGMPEDS 85
BLAST of mRNA_P-littoralis_Contig106.114.1 vs. uniprot
Match: K3W4W8_GLOUD (U6 snRNA-associated Sm-like protein LSm5 n=13 Tax=Oomycota TaxID=4762 RepID=K3W4W8_GLOUD) HSP 1 Score: 134 bits (336), Expect = 2.930e-39 Identity = 65/80 (81.25%), Postives = 74/80 (92.50%), Query Frame = 0
Query: 3 ARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEMDADGTKRKIQLDQILLNGNNVAMLVPGGSP 82
+RLLPLELIDKCIGSRLWIIMKGDKE +GTLRGFDDYVNMVLDDVTEYE+ +G KR+I+LDQ+LLNGNN+ +LVPGG P
Sbjct: 4 SRLLPLELIDKCIGSRLWIIMKGDKEFLGTLRGFDDYVNMVLDDVTEYEITPEG-KREIKLDQVLLNGNNICLLVPGGFP 82
BLAST of mRNA_P-littoralis_Contig106.114.1 vs. uniprot
Match: A0A8K1CS49_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CS49_PYTOL) HSP 1 Score: 133 bits (335), Expect = 4.160e-39 Identity = 64/84 (76.19%), Postives = 76/84 (90.48%), Query Frame = 0
Query: 2 AARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEMDADGTKRKIQLDQILLNGNNVAMLVPGGSPEDA 85
A RLLPLELIDKCIGS++WIIMKGDKE VGTLRGFDDYVNMVLDDVTE+E+ +G K++++L+Q+LLNGNNV +LVPGG P DA
Sbjct: 3 AGRLLPLELIDKCIGSQIWIIMKGDKEFVGTLRGFDDYVNMVLDDVTEFEITPEG-KKEVKLEQVLLNGNNVCLLVPGGFPSDA 85
BLAST of mRNA_P-littoralis_Contig106.114.1 vs. uniprot
Match: A0A7S4M2I3_9EUKA (U6 snRNA-associated Sm-like protein LSm5 n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M2I3_9EUKA) HSP 1 Score: 133 bits (335), Expect = 6.890e-39 Identity = 64/83 (77.11%), Postives = 76/83 (91.57%), Query Frame = 0
Query: 3 ARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEMDADGTKRKIQLDQILLNGNNVAMLVPGGSPEDA 85
+++LPLELIDKCIGS++W+IM+GDKE+VGTLRGFDDYVNMVL+DVTEYE+ ADG KR +LDQILLNGNNVA+LVPGG P A
Sbjct: 21 SQVLPLELIDKCIGSKMWVIMRGDKEIVGTLRGFDDYVNMVLEDVTEYEITADG-KRTTKLDQILLNGNNVALLVPGGDPSQA 102
BLAST of mRNA_P-littoralis_Contig106.114.1 vs. uniprot
Match: A0A7S3BG05_9EUKA (U6 snRNA-associated Sm-like protein LSm5 n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BG05_9EUKA) HSP 1 Score: 133 bits (334), Expect = 8.950e-39 Identity = 64/83 (77.11%), Postives = 76/83 (91.57%), Query Frame = 0
Query: 3 ARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEMDADGTKRKIQLDQILLNGNNVAMLVPGGSPEDA 85
A++LPLE+IDKCIGSR+W+IM+GDKE+VGTLRGFDDYVNMVL+DVTEYE+ A+G KR +LDQILLNGNNVA+LVPGG P A
Sbjct: 18 AQVLPLEIIDKCIGSRMWVIMRGDKEIVGTLRGFDDYVNMVLEDVTEYEITAEG-KRVTKLDQILLNGNNVALLVPGGDPSQA 99
BLAST of mRNA_P-littoralis_Contig106.114.1 vs. uniprot
Match: A0A7S2SPY3_9STRA (U6 snRNA-associated Sm-like protein LSm5 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPY3_9STRA) HSP 1 Score: 132 bits (331), Expect = 3.790e-38 Identity = 64/83 (77.11%), Postives = 74/83 (89.16%), Query Frame = 0
Query: 1 MAARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEMDADGTKRKIQLDQILLNGNNVAMLVPGGSPE 83
M+ + LPL +IDKCIGSRLW+IMKGDKELVGTLRGFDDYVNMVLDDVTEYE+ +G KR +L+QILLNGNN+A+LVPGG PE
Sbjct: 24 MSGKKLPLAIIDKCIGSRLWVIMKGDKELVGTLRGFDDYVNMVLDDVTEYEITPEG-KRATRLEQILLNGNNIALLVPGGDPE 105 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig106.114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig106.114.1 ID=prot_P-littoralis_Contig106.114.1|Name=mRNA_P-littoralis_Contig106.114.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=86bpback to top |