prot_P-littoralis_Contig105.125.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig105.125.1
Unique Nameprot_P-littoralis_Contig105.125.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length339
Homology
BLAST of mRNA_P-littoralis_Contig105.125.1 vs. uniprot
Match: A0A6H5JDE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE5_9PHAE)

HSP 1 Score: 506 bits (1304), Expect = 4.710e-177
Identity = 271/391 (69.31%), Postives = 311/391 (79.54%), Query Frame = 0
Query:    1 MGSASSTDMIRRCVGPEVAPPIVKSLAGASQHIFE---------------------------------------------------MLAVLVLYGKIPARFKVRNLFELFDLDFDGKLNAAETILMLRSVLSGIAKSTGGTQPPSISAVEAIWQHIVRLGYTDEEERLSYTKWVSFCSKTREVHALGKSLDFNKGVCRKSLTSGARAILSAMAIGEDEALLAAQRAALTKKPQERASAAMEKKRVTAA-REGKNKYARSSVLKIKEVFDSLDKDGSGYVDENEWRRLTEDTPLAASDDTFLFIEREREGKISIVEVLNEVHPFAGDADLAKMLEWISEEPTQQGAARLANRELAVADHVEIAALFNIYDAEGSGEMTLSELASAMGEVVGL 339
            MG+ SST+MIRRCVG E+APP+VKSLAGA+QH+FE                                                   MLAVL +YGKIPAR KV+NLF+LFDLD DGKLN++E I+MLRS+L GIAKSTGG  P +IS +EAIWQHIVRLGYTDEEERL + +W++FCSKTREVHALGKSLDF+KGVCRKSLTSG RA LSAM +GED+A++AAQRAALTKKPQERAS A+EKKR  AA REG+N++ARSS++KIKEVFDS+DKDGSGYVDE EWRRLTEDTPLAASDDTFLFIEREREGKISIVEVL E+HPFAGDADLAKMLEWISEE TQQGAAR  NRELAVA+ +E+A LF+IYD EG+GEM LSELA+AMG++VGL
Sbjct:    1 MGNGSSTEMIRRCVGLEIAPPVVKSLAGATQHVFEAVEARTKAMDLPPGLDAVHVAQALGEGRGSQADLVVAIMETKGNGRIDVYEMLAVLTMYGKIPARLKVKNLFDLFDLDVDGKLNSSEAIVMLRSLLHGIAKSTGGVLP-NISDIEAIWQHIVRLGYTDEEERLPFARWITFCSKTREVHALGKSLDFSKGVCRKSLTSGTRATLSAMVLGEDDAVMAAQRAALTKKPQERASVAVEKKRAAAAAREGRNRFARSSIMKIKEVFDSVDKDGSGYVDEEEWRRLTEDTPLAASDDTFLFIEREREGKISIVEVLCELHPFAGDADLAKMLEWISEETTQQGAARKVNRELAVAERLEMAELFSIYDTEGNGEMPLSELATAMGDIVGL 390          
BLAST of mRNA_P-littoralis_Contig105.125.1 vs. uniprot
Match: D7G6E8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6E8_ECTSI)

HSP 1 Score: 491 bits (1263), Expect = 1.080e-172
Identity = 251/316 (79.43%), Postives = 288/316 (91.14%), Query Frame = 0
Query:    1 MGSASSTDMIRRCVGPEVAPPIVKSLAGASQHIFEMLAVLVLYGKIPARFKVRNLFELFDLDFDGKLNAAETILMLRSVLSGIAKSTGGTQPPSISAVEAIWQHIVRLGYTDEEERLSYTKWVSFCSKTREVHALGKSLDFNKGVCRKSLTSGARAILSAMAIGEDEALLAAQRAALTKKPQERASAAMEKKRVTAA-REGKNKYARSSVLKIKEVFDSLDKDGSGYVDENEWRRLTEDTPLAASDDTFLFIEREREGKISIVEVLNEVHPFAGDADLAKMLEWISEEPTQQGAARLANRELAVADHVEIAALFNI 315
            MG+ASST+MIRRCVG E+APP+VKSLAGA+QH+FEMLAVL +YGKIPAR KV+NLF+LFDLD DGKLN++ETI+MLRS+L GIAKSTGG  P +IS ++AIWQHIVRLGYTDEE  L + +W++FCSKTREVHALGKSLDFNKGVCRKSLTSG RA LSAM +GED+A++AAQRAALTKKPQERAS A+EKKR  AA REG+N++ARSS++KIKEVFDS+DKDGSGYVDE EWRRLTEDTPLAASDDTFLFIEREREGKISIVEVL EVHPFAGDADLAKMLEWISEE  QQGAAR+ N ELAVA+ +E+A LF++
Sbjct:    1 MGNASSTEMIRRCVGLEIAPPVVKSLAGATQHVFEMLAVLTMYGKIPARLKVKNLFDLFDLDLDGKLNSSETIVMLRSLLHGIAKSTGGVLP-NISDIQAIWQHIVRLGYTDEEGLLPFARWITFCSKTREVHALGKSLDFNKGVCRKSLTSGTRATLSAMVLGEDDAVMAAQRAALTKKPQERASVAVEKKRAAAAAREGRNRFARSSIMKIKEVFDSIDKDGSGYVDEEEWRRLTEDTPLAASDDTFLFIEREREGKISIVEVLCEVHPFAGDADLAKMLEWISEETIQQGAARIVNPELAVAERLEMAELFSM 315          
BLAST of mRNA_P-littoralis_Contig105.125.1 vs. uniprot
Match: A0A835ZE04_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE04_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 5.010e-16
Identity = 77/272 (28.31%), Postives = 121/272 (44.49%), Query Frame = 0
Query:   22 IVKSLAGASQH----IFEMLAVLVLYGKIPARFKVRNLFELFDLDFDGKLNAAETILMLRSVLSGIAKSTGGTQPPSISAVEAIWQHIVRLGYTDEEERLSYTKWVSFCSKTREVHALGKSLDFNKGVCRKSLT---SGARAILSAMAIGEDEALLAAQRAALTKKPQERASAAMEKKRVTAAREGKNKYARSSVLKIKEVFDSLDKDGSGYVDENEWRRLTEDTPLAASDDTFLFIEREREGKISIVEVLNEVHPFAGDADLAKMLEWISE 286
            +++ L+G  QH    +FE+L+      K+P+  ++R LF++ D+D DG L   E +L++RS L  +AK T G  P     V  I + I +         +   +W+SFC     V A    +  N  +CRK  +    G              + L A        P   A +  ++ R       K  +   +VLK+  VF + DK GSG +  + W RL        S             ++SIV+VL   +PFA DA++A+ML WIS+
Sbjct:   69 VLRCLSGPKQHGLVDVFEVLSAACFLTKMPSAHRLRELFDIHDVDGDGVLGFCECLLLVRSSLHVLAKLTQGKAPEPDQLV-TITEAIFKANTQPAAAAIGMEEWLSFCRGDAAVRAAAARV--NSILCRKMASVFKPGGXXXXXXXXXXXXXSELKAASLVRIASPVRPAPSVHKRPRPQL----KMGHGSDAVLKLHAVFAAADKSGSGVIAADTWHRLMGHAAGTLS---------AYGPQLSIVDVLQAAYPFAADAEMAQMLTWISD 324          
BLAST of mRNA_P-littoralis_Contig105.125.1 vs. uniprot
Match: R1F2R1_EMIHU (Uncharacterized protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F2R1_EMIHU)

HSP 1 Score: 69.3 bits (168), Expect = 6.090e-10
Identity = 49/156 (31.41%), Postives = 77/156 (49.36%), Query Frame = 0
Query:  202 NKYARSSVLKIKEVFDSLDKDGSGYVDENEWRRLT----EDTPLAAS--------------------DDTFLFIEREREGKISIVEVLNEVHPFAGDADLAKMLEWISEEPTQQGAARLANRELAVADHVEIAALFNIYDAEGSGEMTLSELASAM 333
            +KY++ SVL +KEVFD  D DG G +  NE R+      ED   AA                     +  F  ++R+ +G+IS  E+L  + P A   ++  ML W+ + P       L   E  ++   E+ A+F+I+D +GSG +TL EL +A+
Sbjct:   55 SKYSKKSVLLLKEVFDEYDGDGFGTISLNEMRQSLIQKKEDKARAALQSKDLAVRQAAAGIDIADVVEPLFRTLDRDGDGEISFPELLAVLFPLATHTEMETMLSWVKKGPQGPNELPLTMSEEQLS---ELRAIFDIFDTDGSGALTLPELQAAL 207          
BLAST of mRNA_P-littoralis_Contig105.125.1 vs. uniprot
Match: A0A7S0S914_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0S914_9CHLO)

HSP 1 Score: 62.4 bits (150), Expect = 5.550e-8
Identity = 42/135 (31.11%), Postives = 68/135 (50.37%), Query Frame = 0
Query:  203 KYARSSVLKIKEVFDSLDKDGSGYVDENEWRRLTEDTPLAASD-DTFLFIEREREGKISIVEVLNEVHPFAGDADLAKMLEW---ISEEPTQQGAARLANRELAVADHVEIAALFNIYDAEGSGEMTLSELASAM 333
            KY +  VLK+KEVFD  DKDGSG ++ NE +   + T L     + F  ++R+   KI   E L   + +A   ++ +M+ W   I EE       ++  + L+     EI ++F +YD   +G +   EL  A+
Sbjct:   12 KYNKREVLKLKEVFDDADKDGSGEIEANELQHSLKKTNLGEEAVNMFKSMDRDGSKKIDFSEYLRVYYRYAATEEIKEMMLWAYPIKEE------RKVEVKTLSEEQKAEIKSIFVLYDTNNNGTLEKKELIDAL 140          
BLAST of mRNA_P-littoralis_Contig105.125.1 vs. uniprot
Match: D8LE31_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE31_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 1.290e-5
Identity = 39/120 (32.50%), Postives = 56/120 (46.67%), Query Frame = 0
Query:   17 EVAPPIVKSLAGASQHIF---EMLAVLVLYGKIPARFKVRNLFELFDLDFDGKLNAAETILMLRSVLSGIAKSTGGTQPPSISAVEAIWQHIVRLGYTDEEER-LSYTKWVSFCSKTREV 132
            EVA  +  +      H+    E LA L +   +    K+R +F ++D D  G L+  ETIL LRS +SG+ K  G   PP  S +E I     +     E+E  +    +  FC KT EV
Sbjct:   19 EVADAVFSTFDDDKNHLIDALECLASLAIMSGMTIEQKIRYIFGIYDFDESGVLSVDETILALRSTISGLCKLCG-LDPPLESEIEVIALMAFQQSAGQEDEAAIDAVTFTVFCQKTPEV 137          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig105.125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JDE5_9PHAE4.710e-17769.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6E8_ECTSI1.080e-17279.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZE04_9STRA5.010e-1628.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
R1F2R1_EMIHU6.090e-1031.41Uncharacterized protein n=3 Tax=Emiliania huxleyi ... [more]
A0A7S0S914_9CHLO5.550e-831.11Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
D8LE31_ECTSI1.290e-532.50EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 308..336
e-value: 0.058
score: 22.5
coord: 211..239
e-value: 5.8E-4
score: 29.2
coord: 51..79
e-value: 2.3
score: 14.8
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 211..333
e-value: 1.9E-7
score: 31.4
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 55..71
e-value: 0.03
score: 13.8
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 207..242
score: 12.504936
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 47..82
score: 9.854874
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 304..339
score: 9.324862
NoneNo IPR availableGENE3D1.10.238.10coord: 36..139
e-value: 2.9E-7
score: 32.0
NoneNo IPR availableGENE3D1.10.238.10coord: 183..339
e-value: 3.0E-12
score: 48.3
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 220..232
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 51..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig105contigP-littoralis_Contig105:543768..554332 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig105.125.1mRNA_P-littoralis_Contig105.125.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig105 543768..554332 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig105.125.1 ID=prot_P-littoralis_Contig105.125.1|Name=mRNA_P-littoralis_Contig105.125.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=339bp
MGSASSTDMIRRCVGPEVAPPIVKSLAGASQHIFEMLAVLVLYGKIPARF
KVRNLFELFDLDFDGKLNAAETILMLRSVLSGIAKSTGGTQPPSISAVEA
IWQHIVRLGYTDEEERLSYTKWVSFCSKTREVHALGKSLDFNKGVCRKSL
TSGARAILSAMAIGEDEALLAAQRAALTKKPQERASAAMEKKRVTAAREG
KNKYARSSVLKIKEVFDSLDKDGSGYVDENEWRRLTEDTPLAASDDTFLF
IEREREGKISIVEVLNEVHPFAGDADLAKMLEWISEEPTQQGAARLANRE
LAVADHVEIAALFNIYDAEGSGEMTLSELASAMGEVVGL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair