prot_P-littoralis_Contig1029.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1029.3.1
Unique Nameprot_P-littoralis_Contig1029.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length153
Homology
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BLAST of mRNA_P-littoralis_Contig1029.3.1 vs. uniprot
Match: D8LF67_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF67_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 8.500e-36
Identity = 81/157 (51.59%), Postives = 97/157 (61.78%), Query Frame = 0 
Query:    1 MVLLDTAEAFYSELEQMFALCKERGAGTVYTTLKKVEPTITPSPKKAKXXXXXXXXXXXXXXXXXXXXXRREGWLARAKISNNKARKISMLVRRD-----GRILPAYFEVETSLCFSIFLTMKRWNAPVVLRRGSPVPGTVRSREEVDASVYDSGGY 152
            MVLLD+A++F+ ELEQMFALCK+RGAGTVYTTLKKVE       KK                       RREGWLARAKISN KARKIS+L   D     GR    Y +V   LCF +F T +R + P V RRGS VPG++R R+E +A +YDSG +
Sbjct:    1 MVLLDSADSFFVELEQMFALCKQRGAGTVYTTLKKVEAGNKQQLKKGNTETGAGRKAAGPGG-------RREGWLARAKISNQKARKISVLASLDTPPDDGRPQQTY-DVSCPLCFPVFFT-RRQHRPSVRRRGSSVPGSIRGRKEGNACMYDSGRH 148
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BLAST of mRNA_P-littoralis_Contig1029.3.1 vs. uniprot
Match: A0A6H5L6K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6K8_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 7.100e-21
Identity = 55/92 (59.78%), Postives = 61/92 (66.30%), Query Frame = 0 
Query:    1 MVLLDTAEAFYSELEQMFALCKERGAGTVYTTLKKVEPTITPSPKKAKXXXXXXXXXXXXXXXXXXXXXRREGWLARAKISNNKARKISMLV 92
            MVLLD+A++F+ ELEQMFALCK+RGAGTVYTTLKKVE       KKA                      RREGWLARAKISN KARKIS+LV
Sbjct:    1 MVLLDSADSFFVELEQMFALCKQRGAGTVYTTLKKVEAGNKQQLKKASKETGGGRKSAGPGG-------RREGWLARAKISNQKARKISVLV 85
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1029.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LF67_ECTSI8.500e-3651.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6K8_9PHAE7.100e-2159.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009018Signal recognition particle, SRP9/SRP14 subunitGENE3D3.30.720.10Signal recognition particle alu RNA binding heterodimer, srp9/1coord: 1..97
e-value: 1.2E-6
score: 30.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1029contigP-littoralis_Contig1029:11588..24296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1029.3.1mRNA_P-littoralis_Contig1029.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1029 11588..24359 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1029.3.1 ID=prot_P-littoralis_Contig1029.3.1|Name=mRNA_P-littoralis_Contig1029.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=153bp
MVLLDTAEAFYSELEQMFALCKERGAGTVYTTLKKVEPTITPSPKKAKKG
GAGGAGGAGGAGGAGGAGGRREGWLARAKISNNKARKISMLVRRDGRILP
AYFEVETSLCFSIFLTMKRWNAPVVLRRGSPVPGTVRSREEVDASVYDSG
GY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009018Signal_recog_particle_SRP9/14