prot_P-littoralis_Contig1027.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1027.4.1
Unique Nameprot_P-littoralis_Contig1027.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length243
Homology
BLAST of mRNA_P-littoralis_Contig1027.4.1 vs. uniprot
Match: D7FUB1_ECTSI (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB1_ECTSI)

HSP 1 Score: 383 bits (984), Expect = 5.290e-133
Identity = 188/236 (79.66%), Postives = 201/236 (85.17%), Query Frame = 0
Query:    7 AAGSRSVRPVGAYAVAASRAALRAFSAKAPDKTPPTPEDEAAKQAEQMRALDIVLEAQNNTVSPPIYSTRLEPFPENPEEALALDPLPPTVAGRKVIIAQKSKPATTTGTGGGLHSWNLTFKQQERWSNPLMGWTSTADPMSNMQLAFSTPEQAIKFCKKRGWKYEVKAPSKREAVFGKFAYSHNFLPHMVEHDLKVNGTKTTQFVFPTAGSSHYDRPLNFAGTAPVGQHGNPEKK 242
            A GS   RP  A A             K PDK  PTPE+E AK+  QMRALD+VLEAQNNTVSPP+YSTR EPFPENPEEALALDPLPPTVAGRKVIIAQKSKPATTTGT GGL+ WNLTFKQ+ERWSNPLMGWTST DPMSNMQL+FSTPEQA+KFC+KRGWKYEVKAP+KREAVFGKFAYSHNFLPH VEHDLKVNGTKT QF FPTAG+SHY+RPLNF GTAPV QHGNPE+K
Sbjct:    6 ATGSHGARPAAALAXXXXXXXXXXXXXKPPDKXKPTPEEEEAKKVAQMRALDVVLEAQNNTVSPPMYSTRDEPFPENPEEALALDPLPPTVAGRKVIIAQKSKPATTTGTAGGLYGWNLTFKQKERWSNPLMGWTSTGDPMSNMQLSFSTPEQAVKFCQKRGWKYEVKAPAKREAVFGKFAYSHNFLPHNVEHDLKVNGTKTQQFTFPTAGASHYERPLNFVGTAPVRQHGNPEQK 241          
BLAST of mRNA_P-littoralis_Contig1027.4.1 vs. uniprot
Match: A0A7S4A6A8_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6A8_9STRA)

HSP 1 Score: 160 bits (406), Expect = 7.180e-45
Identity = 96/230 (41.74%), Postives = 130/230 (56.52%), Query Frame = 0
Query:   13 VRPVGAYAVAASRAALRAFSAKAPDKTPPTPEDEAAKQAEQMRALDIVLEAQNNTVSPP---IYSTRLEPF-PENPEEALALDPLPPTVAGRKVIIAQKSKPATTTGTGGGLHSWNLTFKQQERWSNPLMGWTSTADPMSNMQLAFSTPEQAIKFCKKRGWKYEVKAPSKREAVFGKFAYSHNFLPHMVEHDLKVNGTKTTQFVFPTAGSSHYDRPLNFAGTAPVGQHGN 238
            +R +   A + +R  LR FS + P+             A  +  L+ +   +N +V+ P   +    L P  P +PEEA AL  +P     R V+I+QK++ ATT+ +     +W L +K +ERW+NPLMGWTSTADP+SN +L F T EQA +F  K GW +EV AP +R   +G   YSHNFL   VE DLKVNGT+T  F  P   +SHY RPL F G     QHG+
Sbjct:    6 LRALPRRAASLARPRLRCFSTEDPEM------------AADLANLERIKAERNRSVTAPHIAVVPDGLAPAGPAHPEEAAALMRIPEIHKKRTVVISQKAQAATTSASHASK-AWRLGWKTEERWTNPLMGWTSTADPLSNTELKFETAEQAARFATKMGWAFEVAAPIERNKQYGTNTYSHNFLQKWVETDLKVNGTETKHFARPRPNASHYFRPLKFHGDGECVQHGH 222          
BLAST of mRNA_P-littoralis_Contig1027.4.1 vs. uniprot
Match: A0A835YZQ1_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZQ1_9STRA)

HSP 1 Score: 136 bits (342), Expect = 7.380e-36
Identity = 89/223 (39.91%), Postives = 129/223 (57.85%), Query Frame = 0
Query:   27 ALRAFSAKAPDKTPPTPEDEA----AKQAEQMRALDIVLEAQNNTVSPPIYSTRLEPFPENPEEALALDPLPPTVAGRKVIIAQKSKPATTTGTGGGLHSWNLTFKQ-QERWSNPLMGWTSTADPMSNMQLAFSTPEQAIKFCKKRGWKYEVKAPSKR--EAVFGKFAYSHNFLPHMVEHDLKVNGTKTTQFVFPTAGSSHYDRPLNFAGTAPVGQHG-NPEK 241
            A+R  S+ AP   PP P+ E     A++A + R L +V E   +  + P    R    P+N EE   L   P     R V I+Q +K ++ T     +  W++ +   +E  +N LMGW +T+DP++++ + F   E+AI FC+K GW Y ++  ++   + ++GK +YS+NFLP  V  DLK+N TKT QFV P A +SHY RPLNF GTAPV QHG  PEK
Sbjct:   19 AVRVLSSNAPATPPPKPDPEVVEKMAEKARKARRLKVVPE---HVAALPDLPGRT---PQNKEEVAVLAMQPENHRKRVVTISQNAK-SSMTSFRHNVVKWHIRWDDHKELETNALMGWAATSDPLASLDMLFEDKEKAIAFCEKMGWGYTLEESNEYTYDNLYGKKSYSYNFLPEAVLADLKLNKTKTKQFVRPGANASHYFRPLNFHGTAPVEQHGPKPEK 234          
BLAST of mRNA_P-littoralis_Contig1027.4.1 vs. uniprot
Match: W7TF31_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TF31_9STRA)

HSP 1 Score: 135 bits (340), Expect = 2.170e-35
Identity = 70/162 (43.21%), Postives = 94/162 (58.02%), Query Frame = 0
Query:   80 FPENPEEALALDPLPPTVAGRKVIIAQKSKPATTTGTGGGLHSWNLTFKQQERWSNPLMGWTSTADPMSNMQLAFSTPEQAIKFCKKRGWKYEVKAPSKREAVFGKFAYSHNFLPHMVEHDLKVNGTKTTQFVFPTAGSSHYDRPLNFAGTAPVGQHGNPEK 241
             P+  EE   L+  P     RKV I QK++ A  +      + W +++  QERWSNPLMGWTSTADP+SN QLAF T E+A +F K++GW   ++    RE V G   Y+ NFL   VE+ LK  GTKT QF  P   +S++ +PL + G     QHG P +
Sbjct:   84 LPQKEEEMAVLNEQPANQRARKVTIRQKAQTAMQSAANKS-YPWYISWGSQERWSNPLMGWTSTADPLSNQQLAFDTAEEAARFAKRQGWAVSIEPAISREQVLGTKKYAFNFLAEDVENKLKREGTKTKQFTNPGYTASNWFQPLKYHGDGECEQHGPPRE 244          
BLAST of mRNA_P-littoralis_Contig1027.4.1 vs. uniprot
Match: A0A7S2UYX7_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYX7_9STRA)

HSP 1 Score: 132 bits (332), Expect = 2.730e-34
Identity = 72/169 (42.60%), Postives = 94/169 (55.62%), Query Frame = 0
Query:   70 PPIYSTRLEPFPENPEEALALDPLPPTVAGRKVIIAQKSKPATTTGTGGGLHSWNLTFKQQERWSNPLMGWTSTADPMSNMQLAFSTPEQAIKFCKKRGWKYEVKAPSKREAVFGKFAYSHNFLPHMVEHDLKVNGTKTTQFVFPTAGSSHYDRPLNFAGTAPVGQHGN 238
            P + ST L   P NP E   L  +P   + R V+I QK+K A T+G  G   +W +T+K  ERW+NPLMGWTST DPMSN+ L F + ++A  F  K GW +E+    +   V G  AYSHNFLP   E  L+  GTK   F      SSH+ R L + G   +  HG+
Sbjct:   75 PYVRSTDL---PANPAELATLTGMPQKQSNRTVVIRQKTKSAMTSGLQG-TKAWTITWKMGERWTNPLMGWTSTNDPMSNLTLRFDSADEAKNFAIKNGWDFELHETPEVRTVAGNKAYSHNFLPKAFEETLREEGTKNKIFTRDAPNSSHFYRYLKYHGDGEIPFHGH 239          
BLAST of mRNA_P-littoralis_Contig1027.4.1 vs. uniprot
Match: A0A485L9T4_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9T4_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.870e-33
Identity = 86/220 (39.09%), Postives = 111/220 (50.45%), Query Frame = 0
Query:   29 RAFSAKAPDKTPPTPEDEAAKQAEQMRALDIVLEAQNNTVSPPIY------STRLEPFPENPEEALALDPLPPTVAGRKVIIAQKSKPATTTGTGGGLHSWNLTFKQQERWSNPLMGWTSTADPMSNMQLAFSTPEQAIKFCKKRGWKYEVKAPSKREAVFGKFAYSHNFLPHMVEHDLKVNGTKTT-QFVFPTAGSSHYDRPLNFAGTAPVGQHGNPEK 241
            RAFSA       P PED+ A     M  L     A+  +V PP        S  L+P   +PEE   +  +     GRK I+   ++    +GT    H W + F  ++ W NPLMGWTS ADP++++ L F T E A  F K++GW  EV  P + E   GK AYSHNFLP  VE+ LK  G K T  F  PT G SH+ + L + G   V QHG   K
Sbjct:   18 RAFSAA------PQPEDDTAL----MEQLKEEALARRYSVDPPHATADENPSLNLQPI-LHPEECAIVSGVGEWTKGRKAIVYMPARNQMQSGTYN-THHWEIRFGTRQTWQNPLMGWTSGADPVADLALKFDTKEAAADFAKRQGWTVEVFEPKETEDFEGKLAYSHNFLPLDVENKLKKYGKKATPHFKHPTGGHSHWVKTLKYHGNGEVAQHGGEAK 225          
BLAST of mRNA_P-littoralis_Contig1027.4.1 vs. uniprot
Match: A0A7S1FML6_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FML6_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.550e-30
Identity = 69/161 (42.86%), Postives = 87/161 (54.04%), Query Frame = 0
Query:   80 FPENPEEALALDPLPPTVAGRKVIIAQKSKPATTTGTGGGLHSWNLTFKQQERWSNPLMGWTSTADPMSNM--QLAFSTPEQAIKFCKKRGWKYEV-KAPSKREAVFGKFAYSHNFLPHMVEHDLKVNGTKTTQFVFPTAGSSHYDRPLNFAGTAPVGQHG 237
             PEN  E   LD        R V I Q +K A T+       +W + +  +E W NPLMG+ S ADPM+ +  Q+ F TPEQA+ FCKKRGW YEV  A +  +  FG   Y HNF     + D++  G K   +    AG+SHY RPLNF GT  V QHG
Sbjct:   89 LPENIAEFAVLDKAHDDQKHRTVTIKQYAKSAMTSNESN-ARAWYIDWDHEENWENPLMGYVSGADPMNQVLKQMRFDTPEQAVAFCKKRGWTYEVGPADTDVQTEFGITQYEHNFFSKAAQVDVRTRGRKCELYHRSAAGASHYFRPLNFHGTDKVEQHG 248          
BLAST of mRNA_P-littoralis_Contig1027.4.1 vs. uniprot
Match: A0A7S1FL80_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FL80_9STRA)

HSP 1 Score: 118 bits (296), Expect = 8.350e-30
Identity = 63/141 (44.68%), Postives = 81/141 (57.45%), Query Frame = 0
Query:  100 RKVIIAQKSKPATTTGTGGGLHSWNLTFKQQERWSNPLMGWTSTADPMSNM--QLAFSTPEQAIKFCKKRGWKYEV-KAPSKREAVFGKFAYSHNFLPHMVEHDLKVNGTKTTQFVFPTAGSSHYDRPLNFAGTAPVGQHG 237
            R V I Q +K A T+       +W + +  +E W NPLMG+ S ADPM+ +  Q+ F TPEQA+ FCKKRGW YEV  A +  +  FG   Y HNF     + D++  G K   +    AG+SHY RPLNF GT  V QHG
Sbjct:    9 RTVTIKQYAKSAMTSNESN-ARAWYIDWDHEENWENPLMGYVSGADPMNQVLKQMRFDTPEQAVAFCKKRGWTYEVGPADTDVQTEFGITQYEHNFFSKAAQVDVRTRGRKCELYHRSAAGASHYFRPLNFHGTDKVEQHG 148          
BLAST of mRNA_P-littoralis_Contig1027.4.1 vs. uniprot
Match: A0A1V9YYP1_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YYP1_9STRA)

HSP 1 Score: 118 bits (295), Expect = 5.650e-29
Identity = 76/215 (35.35%), Postives = 110/215 (51.16%), Query Frame = 0
Query:   28 LRAFSAKAPDKTPPTPEDEAAKQAEQMRALDIVLEAQNNTVSPPIYSTRLEPFPENPEEALALDPLPPTVAGRKVIIAQKSKPATTTGTGGGLHSWNLTFKQQERWSNPLMGWTSTADPMSNMQLAFSTPEQAIKFCKKRGWKYEVKAPSKREAVFGKFAYSHNFLPHMVEHDLKVNGTKTT-QFVFPTAGSSHYDRPLNFAGTAPVGQHGNPEK 241
            LRAFSA A +K   +   +   + +Q R  D VL     T    I      P+P+   E   ++ +     GRK II   ++    +G     H W + F  ++ W NPLMGWTS ADP+  + L F+T E+A++F +++GW  EV   +++E   GK AYSHNFLP  VE+ LK  G K    F     G SH+ + L + G   V QHG  ++
Sbjct:   15 LRAFSAAAEEKVDDSALMKEILETQQKRRYD-VLPPHATTYENAIIGETSLPYPK---ECAVVNAVGGWTKGRKAIIFMPARNQMQSGDYN-THHWEIRFGTRQTWQNPLMGWTSGADPIDALTLKFNTKEEALEFAQRQGWSTEVMPVAEKEDFDGKIAYSHNFLPLDVENKLKKYGKKAAPHFKHAKGGHSHWVKTLKYHGNGEVVQHGGDKE 224          
BLAST of mRNA_P-littoralis_Contig1027.4.1 vs. uniprot
Match: A0A7S0SXQ8_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXQ8_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.650e-28
Identity = 74/183 (40.44%), Postives = 95/183 (51.91%), Query Frame = 0
Query:   66 NTVSPPIYSTRLEP-----FPENPEEALALDPLPPTVAGRKVIIAQKSKPATTTGTGGGLHSWNLTFKQQERWSNPLMGWTSTADPMSNMQLAFSTPEQAIKFCKKRGWKYEVKAPSKREAVF-GKFAYSHNFLPHMVEHDLKVNGTKTTQFVFPTAGSSHYDRPLNFAGTAPVGQHGNPEKK 242
            N+V P    T+  P      P N E  + L  LP     RKV+I  +   ++  G     H W +T+    RWSNPLMGWTST+D M+N++L F   E+AI F ++  W YEVKAP+    V  G   YS NFLP      LK  G+K   F  P  G S++  PLN+ GT PV Q G   KK
Sbjct:   47 NSVHPDSIETKFLPKDDLLAPTNTELRI-LSELPEEEFNRKVLIEPRMVRSSQQGVRI-AHQWQITWLPTARWSNPLMGWTSTSDTMANVKLYFDNREEAIAFAERNAWNYEVKAPTTLTIVQPGTNKYSDNFLPKSTILKLKQEGSKNKIFASPGYGKSNFFMPLNYHGTNPVEQFGPKVKK 227          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1027.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUB1_ECTSI5.290e-13379.66NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7S4A6A8_9STRA7.180e-4541.74NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A835YZQ1_9STRA7.380e-3639.91NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
W7TF31_9STRA2.170e-3543.21NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7S2UYX7_9STRA2.730e-3442.60NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A485L9T4_9STRA2.870e-3339.09NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7S1FML6_9STRA2.550e-3042.86NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7S1FL80_9STRA8.350e-3044.68NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A1V9YYP1_9STRA5.650e-2935.35NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7S0SXQ8_9STRA1.650e-2840.44NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrialPFAMPF04800ETC_C1_NDUFA4coord: 101..193
e-value: 2.2E-27
score: 95.1
IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrialPANTHERPTHR12219NADH-UBIQUINONE OXIDOREDUCTASEcoord: 22..193
IPR038532NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamilyGENE3D3.30.160.190atu1810 like domaincoord: 98..178
e-value: 5.8E-28
score: 98.5
NoneNo IPR availablePANTHERPTHR12219:SF8NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 4, MITOCHONDRIALcoord: 22..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1027contigP-littoralis_Contig1027:21987..31736 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1027.4.1mRNA_P-littoralis_Contig1027.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1027 14577..33437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1027.4.1 ID=prot_P-littoralis_Contig1027.4.1|Name=mRNA_P-littoralis_Contig1027.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=243bp
MLATTHAAGSRSVRPVGAYAVAASRAALRAFSAKAPDKTPPTPEDEAAKQ
AEQMRALDIVLEAQNNTVSPPIYSTRLEPFPENPEEALALDPLPPTVAGR
KVIIAQKSKPATTTGTGGGLHSWNLTFKQQERWSNPLMGWTSTADPMSNM
QLAFSTPEQAIKFCKKRGWKYEVKAPSKREAVFGKFAYSHNFLPHMVEHD
LKVNGTKTTQFVFPTAGSSHYDRPLNFAGTAPVGQHGNPEKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006885NADH_UbQ_FeS_4_mit
IPR038532NDUFS4-like_sf