prot_P-littoralis_Contig1025.9.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1025.9.1
Unique Nameprot_P-littoralis_Contig1025.9.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length903
Homology
BLAST of mRNA_P-littoralis_Contig1025.9.1 vs. uniprot
Match: A0A6H5L2B2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2B2_9PHAE)

HSP 1 Score: 442 bits (1137), Expect = 4.390e-139
Identity = 424/812 (52.22%), Postives = 493/812 (60.71%), Query Frame = 0
Query:    1 MLTRKQRWRRTRTRKNAWGGLPPEVLETMLGAGATGMPKSVSWDHSYAAGLKIRADKAAEVARLAAHEDSRLKAMAASLKGRGXXXXXMGVDRSGGGHMPRSVSCSNFAPKRTLFPRTSSSKDELGRAGEGIGVRRGSSQEGGEGERKQRRRVLPRRRGVSFDTQVKMVLIPKREEFSDSERIRLWWGRDDYARFRQVLIDWKRANAHRISQSDNILSINLSDIDEDEE-VNGNDQDEAVAG------YNRDHQEAAAAADAIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKERLQALEAEVAQXXXXXXXXXXX----------------SGEK-DAAVTDAWEAEVSLAKAMAAAXXXXGGGISGGFAPEYPAD------DDSVLSDVEEGDEEKQENAPRIGERKRGDSEKVFSRKSL---SFTMGGGPGAAAAAPARAGVPDWSPSGGSNGTVPLRRYNTLGERQQHERDEVPSSPV--GGGRLKAVPLSEAQAMTESLRTWRKNFDARNAQAGG-GDDGGEEEDRGRAMSLQQQTRNYAQRGRATALVLSRTKWASDVAGIGLGAAPXXXXXXXXXRDHLHFRSASGGVAATGPCGSTAAAXXXXXXXXXXXXXXXXXXXXGAGEQKHVRTLPCQVWP--------------ASRAGLVMPAFDREMRKAATRRAEMEEAQAAKAXXXXXXXXXXXXXXXXXXXXXXAEVKSTGRGKQPAGVFEAFAGGDATSASAAGSVVELGLNDAPGSAAAASAAGLRIATDGVSNLSLRAKDSVENLQKLGERS 762
            M TRKQRWRRTRTRK AWG LPPE+L+ ML AG   MPKSVSWDHSYAA LKIRAD+AAEVA  AA EDS+L+A   +     XXXXX  V+ S    +PRS SCS+  PKRTLFPRTSSSKDELG A                     +RR+L  RRGVSF+TQVKMVLIPKREEFS+ ER++LWWGR+DYA+FRQVLIDWKRANAHRIS SDNILSINLSDIDE+EE   G D     A       Y RDH+EAAAAA+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    E ++        XXXXXXXXXXX                +G++ ++   DA E EV++AKA AAA    GGGI+GG  PE  A       +   L DV +G +E+Q+                         SF++G       +  A  G PDWSP+GG+NGT PLRR  T GE         PSSP   GG RLK VPLSEAQAM ESLR WR++FD RNA  GG   DG  EEDR RA+SLQ+Q+R++A+ GRATAL  S+TKW +DV G G G++             L     SGG   +G        XXXXXXXXX           G GE+ H RTL  Q W               AS    VM AF+R+ ++AA R+AE+                   XXXXXXXXXXX      G     AG   A A  +       GSVV LGLNDAPGSA+AASAAGLRIA +G+SNLSLR++DSVENLQ++GE+S
Sbjct:    1 MYTRKQRWRRTRTRKQAWGDLPPELLDAMLAAGGGRMPKSVSWDHSYAARLKIRADRAAEVAHRAAAEDSKLRA---AXXXXXXXXXXXXVEVS----IPRSASCSSLGPKRTLFPRTSSSKDELGAAXXXXXXXXXXXX-----XXXHKRRMLSHRRGVSFNTQVKMVLIPKREEFSELERVKLWWGREDYAQFRQVLIDWKRANAHRISHSDNILSINLSDIDEEEESATGQDHSPGAAAVAVGSRYTRDHEEAAAAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALNAEEMERXXXXXXXXXXXXXXXXXXXXXXXXXLEDVCQQVAAGQRNESGGADALEMEVAVAKAKAAAVGAAGGGIAGGAVPELSAXXXXXXXNGDGLGDVPQGTDEEQKXXXXXXXXXXXXXXXXXXXXHCARASFSVG------ESGLAGGGGPDWSPNGGANGTFPLRRALTFGEVGG---GHSPSSPADSGGARLKEVPLSEAQAMAESLRAWRQSFDVRNASFGGESGDGDAEEDRDRAVSLQEQSRSFARIGRATALFTSQTKWTTDVVGGGEGSSSVEATGLG-----LDPGGRSGGEEGSGAM-XXXXXXXXXXXXXXGSRVDRGQRQDGVGEKTH-RTLSDQEWSSSSRRTVEMAASEAASLTNPVMAAFERKRKEAAARQAEVXXXXXX-------------XXXXXXXXXXXXXKAGNGEVAPAAGAEGAPAAAEDDGELHMGSVVRLGLNDAPGSASAASAAGLRIAAEGISNLSLRSRDSVENLQEMGEQS 771          
BLAST of mRNA_P-littoralis_Contig1025.9.1 vs. uniprot
Match: D8LQA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA1_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 4.180e-56
Identity = 216/453 (47.68%), Postives = 253/453 (55.85%), Query Frame = 0
Query:  337 DAWEAEVSLAKAMAAAXXXXGGGISGGFAPEYPADDDSV----------LSDVEEGDEEKQENAPRIGERK--RGDSEKVFSRKSLSFTMGGGPGAAAAAPARAGVPDWSPSGGSNGTVPLRRYNTLGERQQHERDEVPSSPV--GGGRLKAVPLSEAQAMTESLRTWRKNFDARNAQAGGGDDGGEEEDRGRAMSLQQQTRNYAQRGRATALVLSRTKWASDVAGIGLGAAPXXXXXXXXXRDHLHFRSASGGVAATGPCGSTAAAXXXXXXXXXXXXXXXXXXXXGAGEQKHVRTLPCQVWPASR----------AGL---VMPAFDREMRKAATRRAEMEEAQAAKAXXXXXXXXXXXXXXXXXXXXXXAEVKSTGRGKQPAGVFEAFAGGDATSASAAGSVVELGLNDAPGSAAAASAAGLRIATDGVSNLSLRAKDSVENLQKLGERS 762
            DAWE EV++A      XXXX     GG  PE  A               L DV EG +E Q+   RIG+     G  +K       SF++GG      +  A  G PDWSP+GG+NGT PLRR  T GE         P SP   GGGRL+ VPLSEAQAM ESLR WR++FD RNA  G   DG  EEDRGRA+SLQ Q+R++A+RGRATALV SRTKW SDV G G G++             L     SGG   +G        XXXXXXXXXXX         G GE+ H RTL  Q W +SR          A L   VM AF+RE ++AA R+AE+E+AQ    XXXXXXXXXXXXXXXXXXXXXX          +  G                GSVV LGLNDAPGS      AGLRIA +G+SNLSLR++DSVENLQ+ GE+S
Sbjct:   43 DAWEVEVAVAXXXXXXXXXXXXXXXGGAVPELSAXXXXXXXXXXXXXXGLEDVPEGTDEGQKEEARIGKEVVGSGGGKKRRPCARASFSVGG------SGLAGGGGPDWSPNGGANGTFPLRRALTFGEVGG---GHGPCSPADSGGGRLREVPLSEAQAMAESLRAWRQSFDVRNAFFGESGDGDAEEDRGRAVSLQVQSRSFARRGRATALVTSRTKWTSDVVGGGEGSSGVEAKGLG-----LELGGRSGGEEGSGAMAGXXXXXXXXXXXXXXXCVDRGQRQDGVGEKTH-RTLSDQEWSSSRRIVEMAASEAASLTNPVMAAFERERKEAAARQAEVEDAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTAEDDGELHV------------GSVVRLGLNDAPGSXXXXXXAGLRIAAEGISNLSLRSRDSVENLQERGEQS 468          
BLAST of mRNA_P-littoralis_Contig1025.9.1 vs. uniprot
Match: A0A835Z1A2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1A2_9STRA)

HSP 1 Score: 103 bits (257), Expect = 4.930e-20
Identity = 50/73 (68.49%), Postives = 62/73 (84.93%), Query Frame = 0
Query:  158 RGVSFDTQVKMVLIPKREEFSDSERIRLWWGRDDYARFRQVLIDWKRANAHRISQSDNILSINLSDID-EDEE 229
            R V+FD +V++VLIPKR+E +D +R RLWW RDDYA+FRQVLIDWK  NA +IS +DNILSINLSD+D ED+E
Sbjct:  107 RAVAFDPRVQVVLIPKRDEINDFDRYRLWWSRDDYAKFRQVLIDWKTINADKISPTDNILSINLSDLDAEDDE 179          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1025.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L2B2_9PHAE4.390e-13952.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQA1_ECTSI4.180e-5647.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z1A2_9STRA4.930e-2068.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 300..327
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..405
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..329
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 494..521
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 434..466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..418
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..337

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1025contigP-littoralis_Contig1025:28921..41138 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1025.9.1mRNA_P-littoralis_Contig1025.9.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1025 28244..43834 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1025.9.1 ID=prot_P-littoralis_Contig1025.9.1|Name=mRNA_P-littoralis_Contig1025.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=903bp
MLTRKQRWRRTRTRKNAWGGLPPEVLETMLGAGATGMPKSVSWDHSYAAG
LKIRADKAAEVARLAAHEDSRLKAMAASLKGRGGGGGGMGVDRSGGGHMP
RSVSCSNFAPKRTLFPRTSSSKDELGRAGEGIGVRRGSSQEGGEGERKQR
RRVLPRRRGVSFDTQVKMVLIPKREEFSDSERIRLWWGRDDYARFRQVLI
DWKRANAHRISQSDNILSINLSDIDEDEEVNGNDQDEAVAGYNRDHQEAA
AAADAIAAAAEAGKAAAAAAEAATAQAIAAATAAAAAAATAAEVAALHAE
EVEKERLQALEAEVAQQQKQQQQQQDESGEKDAAVTDAWEAEVSLAKAMA
AAVAAAGGGISGGFAPEYPADDDSVLSDVEEGDEEKQENAPRIGERKRGD
SEKVFSRKSLSFTMGGGPGAAAAAPARAGVPDWSPSGGSNGTVPLRRYNT
LGERQQHERDEVPSSPVGGGRLKAVPLSEAQAMTESLRTWRKNFDARNAQ
AGGGDDGGEEEDRGRAMSLQQQTRNYAQRGRATALVLSRTKWASDVAGIG
LGAAPAATAVAARARDHLHFRSASGGVAATGPCGSTAAAAAAWAGSCGSS
GEAFGGNGGGAGEQKHVRTLPCQVWPASRAGLVMPAFDREMRKAATRRAE
MEEAQAAKAAAMVRAAAAAAAEAAAAAEAAGAEVKSTGRGKQPAGVFEAF
AGGDATSASAAGSVVELGLNDAPGSAAAASAAGLRIATDGVSNLSLRAKD
SVENLQKLGERSEAVAGGDATSASPVGSVVELGLNDAPGSAAAASAAGLR
IATDGVSNLSLRAKDSVENLQKLGERSEAVAGGDATSASPVGSVVELGLN
DAPGSAAAASAAGLRIATDGVSNLSLRSKDSVENLQELGEHSWGPLPLSS
SA*
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