prot_P-littoralis_Contig1008.7.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1008.7.3
Unique Nameprot_P-littoralis_Contig1008.7.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length865
Homology
BLAST of mRNA_P-littoralis_Contig1008.7.3 vs. uniprot
Match: D8LEH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEH6_ECTSI)

HSP 1 Score: 317 bits (813), Expect = 4.030e-95
Identity = 175/259 (67.57%), Postives = 189/259 (72.97%), Query Frame = 0
Query:  471 RYYFRDPRLEATLALIRSGQAFCQERHIVVDFVRRAKPTTAGSGRAEVQPMGDTLRHALLLTDAALYLLEVEMLPP---QTPSLGQGHPPSSTETQGEPASXXXXXXXXXXXXXXXXXXXGFSDTXXXXXXXAGSIKSAKGGAG-----VIEKAKVKSIKLMDRLQPSELWSVSLPFREATLRNGDVVAKRGTGIVLHTRVDGREGNLWLKCRSNQDRGALVDAIVPWFEANLPGGRELDVQQVPESPMALKLARLDAA 721
            R +FRDPRLEATLALIRSGQAFCQERHIVVDFVRRAKPTT G G+AE+QPM D  RHALLLTDAALYLLEVEMLPP   ++PS GQGHPPS     G P S                                     A+GG G     V+EKAKVKSIKLMDRLQPSEL  VSLPFRE TLRNGDVVAKRG GIVLHT V+GREGNLWLKCRSNQDRGALV+A+VPWFE N P  +EL+VQQVPESPMA +LARL+AA
Sbjct:  270 RNFFRDPRLEATLALIRSGQAFCQERHIVVDFVRRAKPTTVGLGKAELQPMDDLTRHALLLTDAALYLLEVEMLPPVPPRSPSPGQGHPPSQA---GSPESTERGSFPRSPNVVGP---------------------GARGGGGMIAAVVVEKAKVKSIKLMDRLQPSELLKVSLPFREVTLRNGDVVAKRGCGIVLHTSVEGREGNLWLKCRSNQDRGALVEALVPWFETNSPTRKELNVQQVPESPMARQLARLNAA 504          
BLAST of mRNA_P-littoralis_Contig1008.7.3 vs. uniprot
Match: A0A6H5JCY2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCY2_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 3.450e-35
Identity = 218/620 (35.16%), Postives = 261/620 (42.10%), Query Frame = 0
Query:   79 KQTRPARNQRFTQYGTRFNATNETAGPGGVPAVARSPEDPSVRFVSIGGGGPTSASTDRATSIGRGXXXXXXXXXXXAASENETEGRARGGARYAPRERERETN--GASP-----LQPLTGPAALASLIDRTLTVTTGR-----TAGDTLSTLDPSITSGGSGGRAFEVRGGGXXXXXGVDC-----ISPVYSETWEWERPET--PPAPMLNLHQSSGSEGPSGSEDDEGFGVGHQAGSAEYEDFVSQRRRSAGNNAQGFAAVDAANNASSSSSSAFRFRPALLSVP--RGFAPGIS-----------------------------GKGAAEALRSAMA------------RGTAEGSSLSPPPEH-------------------------------------------------ASLPPRIPRSASVGAMVASLIVPTPAPPQPSA---RKLAGGGAPVPAAVGVPAGVALSRSRSPARVRSSAKPARARGLR-------------GGTDNSFHGHGGRYYFRDPRLEATLALIRSGQAFCQERHIVVDFVRRAKPTTAGSGRAEVQPMGDTLRHALLLTDAALYLLEVEMLPPQTP---SLGQGHPPSSTETQGEPAS 568
            +QT+P  NQRF+QY  RFN +   A    + +  R  +  S             A           XXXXXXXXXXX    N  +G+A GGAR   R+R+RE N  G+SP     L PLTGP+ALA+ I+ TLTVTTGR      AG++++T D S TS    G         XXXXX         ++P    +  WE P    PPA M NLHQSSGSEGPSGSEDDEGFG+    GS EY  F+ +R                     S+ S+  +   + +S P  RG   G                               G G+A  L S  A            R T   +S                                                        ASLPPR PR A+V       + P+           RKL  G      A+           R      S++K  RA+  +                         R +FRDPRLEATLA       FCQERHIVVDFVRRAKPTT  SG+AE+QPM D  RHALLLTDAALYLLEVEMLPP TP   S GQGHPPS     G P S
Sbjct:   78 RQTQPQANQRFSQYLARFNMSPRQAVAAAISSPRRGAKSLSNNVF--------FAXXXXXXXXXXXXXXXXXXXXXXXXXVNGDDGKA-GGARLPRRQRDRERNAKGSSPPPSPSLLPLTGPSALAATINSTLTVTTGRLAGERAAGESITTSDSSFTSDSLSGXXXXXXXXXXXXXXXXAAGDDGDVTPPPGHSLPWEHPPASPPPACMPNLHQSSGSEGPSGSEDDEGFGL--CGGSIEYRKFLLRR---------------------STLSAGAKETASRVSTPGRRGLGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGGGSAAGLPSTSASSRPANKGKGGLRSTGATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASLPPRAPRLATVPGGTNPRVQPSXXXXXXXXXXXRKLTVG------ALXXXXXXXXXXXRGTLESFSASKLLRAKAAKEXXXXXXXXXXXXXXXXXXXXXXXSRNFFRDPRLEATLA-------FCQERHIVVDFVRRAKPTTVASGKAELQPMDDHTRHALLLTDAALYLLEVEMLPPVTPRSPSPGQGHPPSQA---GSPES 649          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1008.7.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEH6_ECTSI4.030e-9567.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCY2_9PHAE3.450e-3535.16Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 547..575
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..391

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1008contigP-littoralis_Contig1008:24126..28946 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1008.7.3mRNA_P-littoralis_Contig1008.7.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig1008 20720..29363 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1008.7.3 ID=prot_P-littoralis_Contig1008.7.3|Name=mRNA_P-littoralis_Contig1008.7.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=865bp
MPTSSAFRKTWSTSSSRQAKSSPVTTPTAVSATTPAVRAKAKEVPSPTDT
APPSYATLMAEAPAPATRTASSSTSSLPKQTRPARNQRFTQYGTRFNATN
ETAGPGGVPAVARSPEDPSVRFVSIGGGGPTSASTDRATSIGRGRDNNLG
RGNDNAASENETEGRARGGARYAPRERERETNGASPLQPLTGPAALASLI
DRTLTVTTGRTAGDTLSTLDPSITSGGSGGRAFEVRGGGGSGGGGVDCIS
PVYSETWEWERPETPPAPMLNLHQSSGSEGPSGSEDDEGFGVGHQAGSAE
YEDFVSQRRRSAGNNAQGFAAVDAANNASSSSSSAFRFRPALLSVPRGFA
PGISGKGAAEALRSAMARGTAEGSSLSPPPEHASLPPRIPRSASVGAMVA
SLIVPTPAPPQPSARKLAGGGAPVPAAVGVPAGVALSRSRSPARVRSSAK
PARARGLRGGTDNSFHGHGGRYYFRDPRLEATLALIRSGQAFCQERHIVV
DFVRRAKPTTAGSGRAEVQPMGDTLRHALLLTDAALYLLEVEMLPPQTPS
LGQGHPPSSTETQGEPASAEAGAVAAAAGGAGSGSSAGFSDTGAGAGASA
GSIKSAKGGAGVIEKAKVKSIKLMDRLQPSELWSVSLPFREATLRNGDVV
AKRGTGIVLHTRVDGREGNLWLKCRSNQDRGALVDAIVPWFEANLPGGRE
LDVQQVPESPMALKLARLDAAARNSEVGIQHSVRFGTVRYGTVRYGTVRY
GTVRPIVLPSPRCISRIPPAGGRPGPANFVFLLLLVRDCFRGSHTWCVRS
SKYPSCWSNSFFRQGRGLWTDWRVRARRQYKQSLAVVKLFMLPVAEENSV
PKQPCALFPKKLMC*
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