prot_P-littoralis_Contig10.30.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig10.30.1
Unique Nameprot_P-littoralis_Contig10.30.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length377
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig10.30.1 vs. uniprot
Match: A0A6H5JF29_9PHAE (MRH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF29_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 5.540e-77
Identity = 151/238 (63.45%), Postives = 161/238 (67.65%), Query Frame = 0 
Query:   85 LSLKAYVKQRQAGSAXXXXXXXXXXXXXXXXXXXXXKRAEELRKTALLGPVLNDGDRGVYLGLTILLRMAGFPLLSPVRGLLLACGFARDQAARVAAALAAKVEEAVHYSGGGPPXXXXXXXXXXXXXXXXXXXXXXXFSAVVRTALEGFRDRGLPGISPHLDYRRYPTLRSAVLRWDELLDGNGRFLLVMWDAPVALRDFFFPDRDDEHERPEAAMLRAGIARAKSILQEAKADDAG 322
            LSLKAYVKQRQAGSA                     KRAEELRKTALLGPVLNDG+RGVYLGLTILLR+AG PLLSP+RGL  A GF RD AAR AA LAA        S G  P                        ++ VR ALE +RDRGLPGISPHLDYRRYPTLRS VLRWDE L GNG+FLLVMWDAPVAL DF FP RDDE+ERPEAAMLR GIARA++ILQE K D AG
Sbjct:  144 LSLKAYVKQRQAGSAAANGGRGQAKAGE--------KRAEELRKTALLGPVLNDGERGVYLGLTILLRLAGLPLLSPLRGLAAAFGFLRDWAARAAAGLAASE------SWGLTP------------------------ASTVRVALEDYRDRGLPGISPHLDYRRYPTLRSVVLRWDEFLHGNGKFLLVMWDAPVALWDFCFPYRDDEYERPEAAMLREGIARARAILQERKPDTAG 343
[Close]
BLAST of mRNA_P-littoralis_Contig10.30.1 vs. uniprot
Match: D7FQB3_ECTSI (Glucosidase 2 subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB3_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 7.790e-71
Identity = 137/205 (66.83%), Postives = 149/205 (72.68%), Query Frame = 0 
Query:  121 KRAEELRKTALLGPVLNDGDRGVYLGLTILLRMAGFPLLSPVRGLLLACGFARDQAARVAAALAAKVEEAVHYSGGGPPXXXXXXXXXXXXXXXXXXXXXXXFSAVVRTALEGFRDRGLPGISPHLDYRRYPTLRSAVLRWDELLDGNGRFLLVMWDAPVALRDFFFPDRDDEHERPEAAMLRAGIARAKSILQEAKADDAGKGG 325
            KRAEELRKTALLGPVLNDG+RGVYLGLTILLR+AG PLLSP+RGL  A GF RD+AAR AA LAA        S G  P                        ++ VR ALEG+RDRGLPGISPHLDYRRYPTLRS VL WDE L GNG+ LLVMWDAPVAL DF FP RDD+HERPEAAMLR GIARA++ILQE K D AG+GG
Sbjct:  418 KRAEELRKTALLGPVLNDGERGVYLGLTILLRLAGLPLLSPLRGLAAAFGFLRDRAARAAAGLAASE------SWGLAP------------------------ASTVRVALEGYRDRGLPGISPHLDYRRYPTLRSVVLHWDEFLHGNGKSLLVMWDAPVALWDFCFPYRDDKHERPEAAMLREGIARARAILQEKKPDTAGRGG 592
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig10.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JF29_9PHAE5.540e-7763.45MRH domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FQB3_ECTSI7.790e-7166.83Glucosidase 2 subunit beta n=1 Tax=Ectocarpus sili... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..376

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig10contigP-littoralis_Contig10:179278..183011 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig10.30.1mRNA_P-littoralis_Contig10.30.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig10 171324..184157 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig10.30.1 ID=prot_P-littoralis_Contig10.30.1|Name=mRNA_P-littoralis_Contig10.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=377bp
MNDEGDGADRSSSSSSSSSGSSGSSGIGSGACLNEREAGGNDDGGSGPSR
SSSSSSSGMGGKVKRQEATPTTPTTPTTTTTTKMLSLKAYVKQRQAGSAA
AAAAAAAAAAGGGEAKAAEEKRAEELRKTALLGPVLNDGDRGVYLGLTIL
LRMAGFPLLSPVRGLLLACGFARDQAARVAAALAAKVEEAVHYSGGGPPP
RPQPQPPSSSSSSSCSSSLSYSFSAVVRTALEGFRDRGLPGISPHLDYRR
YPTLRSAVLRWDELLDGNGRFLLVMWDAPVALRDFFFPDRDDEHERPEAA
MLRAGIARAKSILQEAKADDAGKGGGARETATRGEGTEAAVRAGPGGGRA
IRRSGREMSRVARRGLPVQPVPVQGG*
back to top