prot_P-littoralis_Contig1.77.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1.77.1
Unique Nameprot_P-littoralis_Contig1.77.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length87
Homology
BLAST of mRNA_P-littoralis_Contig1.77.1 vs. uniprot
Match: A0A6H5JNH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNH6_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.230e-47
Identity = 77/86 (89.53%), Postives = 80/86 (93.02%), Query Frame = 0
Query:    1 MLPTASMPCIPVFEDNQGAIQIAHNPITISNSKHTDARHHFIRELVERKEISITHVTSEYQNADFLTKAISRESFELHRDFVMNLQ 86
            MLP A MPCIPVFEDNQGAIQIAHNPIT SNSKH D RHHFIRELVERKEISITHVTSE+Q+ADFLTKAIS+ESF LHRDFVMNLQ
Sbjct:   34 MLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNLQ 119          
BLAST of mRNA_P-littoralis_Contig1.77.1 vs. uniprot
Match: A0A6H5K826_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K826_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 2.810e-43
Identity = 71/86 (82.56%), Postives = 76/86 (88.37%), Query Frame = 0
Query:    1 MLPTASMPCIPVFEDNQGAIQIAHNPITISNSKHTDARHHFIRELVERKEISITHVTSEYQNADFLTKAISRESFELHRDFVMNLQ 86
            MLP A MPCIPVFEDNQGAIQIAHNPIT SNSKH D RHHFIRELVERKEISITHV +++Q+ADFLTKAI +E   LHRDFVMNLQ
Sbjct:   18 MLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAICKEPCALHRDFVMNLQ 103          
BLAST of mRNA_P-littoralis_Contig1.77.1 vs. uniprot
Match: A0A6H5KPI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPI2_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 1.160e-42
Identity = 70/80 (87.50%), Postives = 73/80 (91.25%), Query Frame = 0
Query:    7 MPCIPVFEDNQGAIQIAHNPITISNSKHTDARHHFIRELVERKEISITHVTSEYQNADFLTKAISRESFELHRDFVMNLQ 86
            MPCIPVFEDNQGAIQIAHNPIT SNSKH D RHHFIRELVERKEIS THVTSE+Q+ADFLTKAIS+E F LHRDFVMN Q
Sbjct:    1 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISNTHVTSEFQHADFLTKAISKEPFALHRDFVMNSQ 80          
BLAST of mRNA_P-littoralis_Contig1.77.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 1.200e-42
Identity = 74/86 (86.05%), Postives = 79/86 (91.86%), Query Frame = 0
Query:    1 MLPTASMPCIPVFEDNQGAIQIAHNPITISNSKHTDARHHFIRELVERKEISITHVTSEYQNADFLTKAISRESFELHRDFVMNLQ 86
            MLP ASMPCIPVFEDNQGAIQI HNPIT SNSKH D RHHFIRELVERKEISITHV +++Q+ADFLTKAIS+ESF LHRDFVMNLQ
Sbjct:  291 MLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESFALHRDFVMNLQ 376          
BLAST of mRNA_P-littoralis_Contig1.77.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 2.330e-42
Identity = 77/86 (89.53%), Postives = 80/86 (93.02%), Query Frame = 0
Query:    1 MLPTASMPCIPVFEDNQGAIQIAHNPITISNSKHTDARHHFIRELVERKEISITHVTSEYQNADFLTKAISRESFELHRDFVMNLQ 86
            MLP A MPCIPVFEDNQGAIQIAHNPIT SNSKH D RHHFIRELVERKEISITHVTSE+Q+ADFLTKAIS+ESF LHRDFVMNLQ
Sbjct: 1387 MLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNLQ 1472          
BLAST of mRNA_P-littoralis_Contig1.77.1 vs. uniprot
Match: A0A6H5K9U4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U4_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 3.170e-42
Identity = 77/86 (89.53%), Postives = 80/86 (93.02%), Query Frame = 0
Query:    1 MLPTASMPCIPVFEDNQGAIQIAHNPITISNSKHTDARHHFIRELVERKEISITHVTSEYQNADFLTKAISRESFELHRDFVMNLQ 86
            M P ASMPCIPVFEDNQGAIQIAHNPIT SNSKH D RHHFIRELVERKEISITHVTSE+Q+ADFLTKAIS+ESF LHRDFVMNLQ
Sbjct:  694 MWPDASMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNLQ 779          
BLAST of mRNA_P-littoralis_Contig1.77.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 7.780e-42
Identity = 73/86 (84.88%), Postives = 78/86 (90.70%), Query Frame = 0
Query:    1 MLPTASMPCIPVFEDNQGAIQIAHNPITISNSKHTDARHHFIRELVERKEISITHVTSEYQNADFLTKAISRESFELHRDFVMNLQ 86
            MLP A MPCIPVFEDNQGAIQIAHNPIT SNSKH D RHHFIRELVERKEISIT+V + +Q+ADFLTKAIS+ESF LHRDFVMNLQ
Sbjct:  236 MLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAISKESFALHRDFVMNLQ 321          
BLAST of mRNA_P-littoralis_Contig1.77.1 vs. uniprot
Match: A0A6H5JTT9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT9_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 1.210e-41
Identity = 71/85 (83.53%), Postives = 74/85 (87.06%), Query Frame = 0
Query:    1 MLPTASMPCIPVFEDNQGAIQIAHNPITISNSKHTDARHHFIRELVERKEISITHVTSEYQNADFLTKAISRESFELHRDFVMNL 85
            MLP A MPCIPVFEDN   IQIAHNPIT SNSKH D RHHFIRELVERKEISITHVTSE+Q+ D LTKAIS+ESF LHRDFVMNL
Sbjct:   84 MLPDAGMPCIPVFEDNNQRIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHVDSLTKAISKESFALHRDFVMNL 168          
BLAST of mRNA_P-littoralis_Contig1.77.1 vs. uniprot
Match: A0A6H5K684_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K684_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 1.590e-41
Identity = 72/83 (86.75%), Postives = 76/83 (91.57%), Query Frame = 0
Query:    1 MLPTASMPCIPVFEDNQGAIQIAHNPITISNSKHTDARHHFIRELVERKEISITHVTSEYQNADFLTKAISRESFELHRDFVM 83
            MLP A MPCIPVFEDNQGAIQIAHNPIT SNSKH D RHHFIRELVERKEISITHVTSE+Q+ADFLTKA S+ESF LHRDFV+
Sbjct:  226 MLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKATSKESFALHRDFVI 308          
BLAST of mRNA_P-littoralis_Contig1.77.1 vs. uniprot
Match: A0A6H5JT91_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT91_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 1.880e-41
Identity = 73/80 (91.25%), Postives = 76/80 (95.00%), Query Frame = 0
Query:    7 MPCIPVFEDNQGAIQIAHNPITISNSKHTDARHHFIRELVERKEISITHVTSEYQNADFLTKAISRESFELHRDFVMNLQ 86
            MPCIPVFEDNQGAIQIAHNPIT SNSKH D RHHFIRELVERKEISITHVTSE+Q+ADFLTKAIS+ESF LHRDFVMNLQ
Sbjct:  351 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNLQ 430          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.77.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNH6_9PHAE1.230e-4789.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K826_9PHAE2.810e-4382.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPI2_9PHAE1.160e-4287.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE1.200e-4286.05Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JHY5_9PHAE2.330e-4289.53Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5K9U4_9PHAE3.170e-4289.53Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KP70_9PHAE7.780e-4284.88Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTT9_9PHAE1.210e-4183.53Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K684_9PHAE1.590e-4186.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT91_9PHAE1.880e-4191.25Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF343SUBFAMILY NOT NAMEDcoord: 9..81
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 9..81
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 10..73
e-value: 1.82961E-26
score: 92.5313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:480530..480790 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.77.1mRNA_P-littoralis_Contig1.77.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1 479924..480797 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1.77.1 ID=prot_P-littoralis_Contig1.77.1|Name=mRNA_P-littoralis_Contig1.77.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=87bp
MLPTASMPCIPVFEDNQGAIQIAHNPITISNSKHTDARHHFIRELVERKE
ISITHVTSEYQNADFLTKAISRESFELHRDFVMNLQ*
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