prot_P-littoralis_Contig1.414.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1.414.3
Unique Nameprot_P-littoralis_Contig1.414.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1619
Homology
BLAST of mRNA_P-littoralis_Contig1.414.3 vs. uniprot
Match: D7G501_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G501_ECTSI)

HSP 1 Score: 1357 bits (3511), Expect = 0.000e+0
Identity = 865/1449 (59.70%), Postives = 962/1449 (66.39%), Query Frame = 0
Query:   74 KKSADGST-DLEKSRVQLVSSLPDETLCKLLASREATLTLQEYIAEHPNAEFRAFSISRLASACARCSSFLDRRAFVNGAFEEGGDAQRYKQHARDWINDFFSSLPKICDDPSDAVAAAAFSAIEALLQGHPLCVTAVNTELGNFWRSECEQRRKGVGEREEKGRVWVGGPITHNVFSRHKQAFLSQRVGETVLRSALPRIRRLLHRQSRMTLVGKAQLAASAIRACASLLVAALRLSTSHTGIPILNPLLEKPTSVDFLGAKKKVR------RNRXXXXXXXXXXXXDLDVTLPPKDVAGDWVGVRLRAILEEGKNGDVLLVEAAAWATLRMLQTVAMGPLRKSMAPRVSEAFVRVLLAGQAATPKHSWPSLHAGQQEVAAGSALALRLAPPTATALLAPRVLASVERVPHPRQRLALLADVFFLLLVRPSRGGRAP---GGRGRSGDERNDSRDR-RGSGGSSRPGAPREGAKMLVSVVEGEWFLSLVSDTPGSCRTRRLLFREEAVAALTTTCAQILAAGTVAVMSPATGNAAAVGVGTLARSCNSNGPVTVTAQQHPGKEGDHNDNPNGXKXXXXXXXXXXXXXXXXXXXAEKGRWSDLETWLDCSLSALEACTRCVNWTSSVGYVGGLAYVRLLSLVLRLLCPLTA-PAKDGHSEDAADDTDRLFFACCS------GAVVVGKTLDGGRTPGGEQGRLSWARQRLAHVVDDLMWRLREGLPGRDIRLRLLQATCTHVRLSAVVGGDDRLAEDSASELVSVLQGELGELDTQAGFGTQTTRAPAVEGDGYEPS-GADNASGVDGNGGRGGGSSYSAGXXXXXXXXXPXXXXLGGPGQGGEERAVGREHGGDANWGTSPFASGRRGSLTDVMTHELVIGCLVRLALAVEGETAQEVLLVLERERGRARVRERLGRGAFGPMEDVVAKGIRAVQLLVLHRPATSSKSTAGGTEALLLKRFLGTMDLGWQAAVQADERALTVISAETFDHGAHTFPDLHRCLGRLLCHGVGVDLVNNGEGVIHTEGGGDGFAGSMEAAAA-----FEAHAWEEEAPQAQLNGGSDPVVVTASHVIYHGGD-IGGGS--VVGEGETALGPSPWM-LAFADGDRDAADAAAGPGVVKKVASRGVRLRLRVYNATNTRLQGFSVRLSFGQGTEAVGMGNGGKVESVVQEVLMPSAGHTLEVPVSPLDVLGDVIVHVTVAFPDTEPESEFESEGTAELLGVETATRGSEVSGSGGGT---PHFGQGQQSLDSGAAEDGGGGDGVVGGSVPVVLYAGSYCVPAEAFLGSPKQATATWGGFQSVWSGLPYVVAFPVESSSHSQXXXXXXXXXXXXXXXXXXXXXXXXXXXTARSIWLAXXXXXXXXXXXXXXXXXXXXAAVACPFGNTDYALSTAWAFEAWDGTPVLCALTAMKAPFCSPPTAFGGSGGGGAHEGQPSWHGRLE 1491
            K+S D S+ ++E++ VQLVSSLP+ETLCK+LA+RE                                                           RDWI+DFFSSLPK+CDDPS+ VAAAAFSAIEALL+ HPLC TAV+ E+  FW  E + + +G G  +E GR   G P    +F  HKQAF  Q VGE VLRSALPRIRRLLHRQSRM + G+ Q AA A+RACAS++VAALRLSTS +G PI NPLL+ PTSVDFLG KK          +             DLD TLPPKD+A +W+  RL  ILE G+ GD LLVE AAWATLR+L TVAMGPLR S APRV+EAF+RVL+AG+AATPKH WPSLHAG QEVAAG+ALALRLA P+ATA LAP VLA+ ERVP PRQRLALLADVFFLLLVRP R GRAP   GG G  G ERND R    G  GSSR GAPREG KML SV++ EWF  LVSD+PG    RRLLFREEAVA L TTCAQ+LAAG VA +SPA   AAAVG+G LARSC+S      TA +    EG  N +  G        XXXXXXXXXXXXXA+KGRWSDLETWLDCSL+ALEA TRCVNW S  GYVGGLAYVRLLSLVLRLLCPLTA PA  G   D+A   DR+     S      G V VG  LD   T GG +GRL+WARQRLAHVVDDLMWRLREGLPGRDIRLRLLQATCTHV LSAVV GD  + EDSA+ELVSVLQGELGELD QAGF TQ   A A    G EP  G D   G D + GRGG       XXXXXXXXX XXXX                      W +    SGR GSLTDVM HELVIGCLVRLAL  EGETA EV+ VLE ERGRAR RERLGRGA GPME++VAKGIRA+QLLV   P+TS K   G  EA+LLKR + TMDLGW A VQ DERALT  SAE FDH  H FP+LHR L RLLC G+GVD  +  E    + G GD F G +EA AA     FEAHAWEEEAPQAQLNGGSDPVVVTASH++YHG    GGG+    G G  ALGP+    LAFA  D DAA     PG+V KVASR V LR+RV+NATNTRL GFS+RLSFGQG EAVGMG GG+VES VQEVLMPSA HTLEVPV+PLDVL DVIVHV+V FPDTEPESEFESEGTAELLGVE+  +G      GGG+     FGQ Q S D GA + G  G G   GSV V+L AGSY VPAEAFLG P++A ATW GFQ+VW GL YV A PVES+ H                             TA  + LA                    AAV CP GNTDYA+S+AW F+AWDGTPVLCALT MKAPF     + GG         QPSW+GRLE
Sbjct:   24 KQSVDSSSAEVEQAAVQLVSSLPEETLCKVLANRE---------------------------------------------------------RVRDWIHDFFSSLPKLCDDPSNIVAAAAFSAIEALLREHPLCETAVDKEVRGFWGLESDVQPEGKGGVKE-GRGSRGTP--GGMFGGHKQAFPLQHVGEIVLRSALPRIRRLLHRQSRMVVDGEPQTAAPAMRACASVMVAALRLSTSPSGKPIENPLLQNPTSVDFLGVKKSALGSGPSGNDAGAEGSTGKEEEKDLDATLPPKDLAEEWLRARLGGILEGGRGGDALLVETAAWATLRVLHTVAMGPLRVSFAPRVAEAFLRVLVAGKAATPKHLWPSLHAGHQEVAAGAALALRLASPSATAALAPHVLAAAERVPQPRQRLALLADVFFLLLVRPGRNGRAPCVGGGSGSGGGERNDDRQGGEGGTGSSRTGAPREGPKMLASVLDEEWFEQLVSDSPGRS-ARRLLFREEAVAVLVTTCAQVLAAGVVAALSPAAEKAAAVGIGNLARSCDSR--CRATAARSDTSEGHKNGSSVGNGNANFAAXXXXXXXXXXXXXAKKGRWSDLETWLDCSLTALEAFTRCVNWNSKTGYVGGLAYVRLLSLVLRLLCPLTAAPADSGDDRDSASTADRVLLGGRSYGGDGKGGVDVGVALDDDSTAGGGRGRLAWARQRLAHVVDDLMWRLREGLPGRDIRLRLLQATCTHVGLSAVVSGDVGVTEDSANELVSVLQGELGELDAQAGFSTQPRPARAATSGGDEPGDGDDGHRGTDAHAGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XQWESISSISGRTGSLTDVMAHELVIGCLVRLALVTEGETAHEVMSVLEHERGRARARERLGRGAVGPMEEIVAKGIRALQLLVF--PSTSPKVADGSPEAVLLKRLVRTMDLGWHAVVQPDERALTGSSAELFDHEVHAFPNLHRRLRRLLCGGIGVDTASTDE--RPSTGSGD-FPGDLEAGAAAVITPFEAHAWEEEAPQAQLNGGSDPVVVTASHIVYHGDSGTGGGACGATGGGGRALGPTTLAALAFAGVDGDAASPGTIPGLVGKVASRAVTLRIRVFNATNTRLHGFSIRLSFGQGGEAVGMGGGGRVESAVQEVLMPSAAHTLEVPVTPLDVLTDVIVHVSVVFPDTEPESEFESEGTAELLGVESTEKGRGGDSGGGGSNALSGFGQNQPSFDGGAGDTGVDGGG--SGSVTVILQAGSYRVPAEAFLGPPERAAATWVGFQNVWCGLAYVTAIPVESARH----------LPRAITAAAGHEHAAMSLRTASGVRLAMMPVSSRGGGGRGCDDARSAAAVECPVGNTDYAVSSAWVFQAWDGTPVLCALTVMKAPFSLLQASGGGXXXXXXXGEQPSWYGRLE 1389          
BLAST of mRNA_P-littoralis_Contig1.414.3 vs. uniprot
Match: A0A836CDV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDV2_9STRA)

HSP 1 Score: 224 bits (570), Expect = 3.200e-55
Identity = 382/1519 (25.15%), Postives = 546/1519 (35.94%), Query Frame = 0
Query:   88 VQLVSSLPDETLCKLLASREATLTLQEYIAEHPNAEFRAFSISRLASACARCSSFLDRRA---------FVNGAFEEGGDAQRYKQHARDWINDFFSSLPKICDDPSDAVAAAAFSAIEALLQGHPLCVTAVNTELGNFWRSECEQRRKGVGEREEKGRVWVGGPITHNVFSRHKQAFLSQRVGETVLRSALPRIRRLLHRQSRMTLVGKAQLAASAIRACASLLVAALRLSTSHTGIPILNPLLEKPTSVDFLGAKKKVRRNRXXXXXXXXXXXXDLDVTLPPKDVAGD-WVGVRLRAILEEGKNGDVLLVEAAAWATLRMLQTVAMGPLRKSMAPRVSEAFVRVLLAGQAATPKHSWPS----LHAGQQEVAAGSALALRLAPPTATALLAPRVLASVERVPHPRQRLALLADVFFLLLVRPSRGGRAPGGRGRSGDERNDSRDRRGSGGSSRPGAPREGAKMLVSVVEGEWFLSLVS-DTPGSCRTRRLL---------FREEAVAALTTTCAQILAAGTVAVMSPATGNAAAVGVGTLARSCNSNGPVTVTAQQHPGKEGDHNDNPNGXKXXXXXXXXXXXXXXXXXXXAEKG---------RWSDLETWLDCSLSALEACTRCVNWTSSVGYV--GGLAYVRLLSLVLRLLCPLTAPAKDGHSEDAADDTDRLFFACCSGAVVVGKTLDGGRTPGGEQGRLSWARQRLAHV--VDDLMWRLREGLPGRDIRLRLLQATCTHVRLSAVVGGDDRLAEDSASELVSVLQGELGE--LDTQAGFGTQTTR--APAVEGDGYEPSGADNASGVDGNGGRGGGSSYSAGXXXXXXXXXPXXXXLGGPGQGGEERAVGREHGGDANWGTSPFASGRRGSLTDVMTHELVIGCLVRLALAVEGETAQEVLLVLERERGRARVRERLGRGAFGPMEDVVAKGIRAVQLLVLHRPAT---SSKSTAGGTEALLLKRFLGTMD-LGWQAAVQADERALTVISAETFDHGAHTFPDLHRCLGRLLCHG--VGVDLVNNGEGVIHTE---------GGGDGFAGSMEAAAAFEAH--------AWEEEAPQAQLNGGSDPVVVTASHVIYHGGDIGGGSVVGEGETALGPSPWMLAFADGDRDAADAAAGPGVVKKVASRGVRLRLRVYNATNTRL-QGFSVRLSFGQGTEAVGMGNGGKVESVVQEVLMPSAGHTLEVPVSPLDVLGDVIVHVTVAFPDTEPESEFESEGTAELLGVETATRGSEVSGSGGGTPHFGQGQQSLDSGAAEDGGGGDGVVGGSVPVVLYAGSYCVPAEAFL--GSPKQATATWGGFQSVWSGLPYVVAFPVESS--SHSQXXXXXXXXXXXXXXXXXXXXXXXXXXXTARSIWLAXXXXXXXXXXXXXXXXXXXXAAVACPFGNTDYALSTAWAFEAWDGTPVLCALTAMKAPFCSPPTAFGGSGGGGAHEGQP-----------------SWHGRLEVRCCSHACSEFAQCNQERFARFLTNEVFA 1520
            ++L  +LP E L K +        L E  A HPN+  RA +++ +  A ARC+++              F  GA+E GG+ QR +Q   DW+ + ++    +C+D  DAVAAAAF+A+   L+ +PLC TA++T++              +   E   R+        +  +  K AF  Q++GE VLR+ALP + RLL   +R   +G+     SA+R C  L VAALR   S  G   +   L +  S   LG +                       + PP   + D W+   +  +L      D   VE A + TLR+L    + P R  +AP V+                         L+AGQ  +        R APP A   L   ++ +V   P P QRL L+A+ FF ++V    GGRA                       ++P        +L +++E +W   +++ D P +                FREE VAALT TCA +L AG  A                            + A   P  + D  D+ NG                     A            RW DLE W+  S + L A   CV W         G   Y RLL+L+LRL       +                      A+     +          G    AR   AHV  +D L W+L +G+PGR  R+ LL A C +  L+ V G   + A++ A+  V +  GE  +  LD  A    +     APA                             +A XXXXXXXXX XXXX         ERA        A W               V     ++GCLVRLA A +   A   L     ER R  +R+ LG    GP+ D   + + A++ +     A+    +   A    A     F+GT   L   A   + + A    +      G    P       RL C G   G D     +  +             GG G A       A            AW    P  QLNGGS+P+ +TA H                    L P  W    + G           G       +GV LR+  YNATN  +     +RL FG G     +        V+++ L+P A +T +VP++       + V  T+     EP+ E E++  AEL G +   R                                        P+V+ AG Y V AEA L   +          FQS++SGL +  A PV S+  + S                            TA  + L                      + AC     D+A++ AWAFE W G+ +   LTAMK P+ +   A  G    GA   +                  +W GRLE RC    C+E    +  R A F+TN  FA
Sbjct:  144 LRLALALPGEALPKFILLAGVARMLLECAAFHPNSMLRAAAVAEVTDAAARCAAWCGXXXXXXXXXXXFFNGGAYESGGEVQRAQQVLWDWVLEVYARTVVLCEDEDDAVAAAAFAALGGPLRTYPLCATALDTDIAVL-----------LNGAEPAARL--------DASASSKAAFPLQQLGEGVLRAALPALPRLL---ARSCTLGRGS-RCSALRTCCRLAVAALRAGYSACGSTFIGSRLLEKVSRGGLGGRGAAAEAPA--------------ASAPPLLASVDSWLRTGVLPLLS---GLDAEEVECAVFTTLRVLHAPPLRPQRALLAPAVAXXXXXXXXXXXXXXXXXXXXXXXXXLNAGQAALXXXXXXXXRWAPPQALPPLLAALVPAVALCPEPGQRLGLMAEAFFAVMVCMPGGGRA-----------------------NKPA-------ILEAILESDWLHGVLNADAPTAAXXXXXXXXXXXXXVPFREELVAALTHTCAYVLTAGATA----------------------------IAAATAPSADADSGDDVNGSSLPSPVQQQLPLSGVGRYPLAPHAPDAAAAAAERWCDLERWVTMSGAVLHATGLCVGWDGGAASASAGADGYTRLLTLILRLT------SXXXXXXXXXXXXXXXXXXXXXXALGSPSPIFSPNPRPQLSGDARLARAAAAHVPRLDQLGWKLAQGMPGRRARVALLGALCRY--LADVSGAAGQAADEQAARGVRLRPGEEDDAALDLVARVSVELAALDAPATSN-----------------------LKSAAPXXXXXXXXXXXXXXXXXXXXXXXERA--------AQW--------------RVNAQHALLGCLVRLAAAYDSAAAP-ALKAARAERDRVCLRDGLGGQGNGPLVDQARRAVAALEAVTRRGRASLAGGAAELAAAAAARAALGFIGTPPGLPPPAGPLSADDAARKAALRAALLGELALPPAQERDARLGCGGGGTGFDYRTGAQQEVAARLSRHFRWPPRGGHGAAPLPPPCRALPGXXXXXRPHAAWS---PPTQLNGGSEPLHLTACH-------------------RLTPR-WRAHNSAG-----------GXXXXXXGKGVSLRVCAYNATNGSITDALEIRLGFGAGAAPAAVP---AAAVVLRDRLLPGAVYTWDVPLALAPGWRALAVTATITMLHAEPDPELEADSAAELAGGDALLRAXXXXXXXXXXXXXXXXXXXXXXXXXXX------------PLVVGAGMYVVHAEALLLPRAXXXXXXXLAAFQSLFSGLAHRTALPVTSAPWATSLCTNPAELAMAMGAPMPGDGTDDAAAPETADDLELLDADHGDGVRRTAWVPLPPALLS-AC-----DHAITAAWAFETWQGSAITAQLTAMKQPYGAADIAAIGGAESGALSPKALAAAVXXXXXXXXXAAHAWVGRLEFRCADVQCAETVAAHAARLAAFVTNGAFA 1455          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.414.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G501_ECTSI0.000e+059.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CDV2_9STRA3.200e-5525.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1617..1618
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1539..1588
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1566..1580
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 614..635
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 506..523
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 829..918
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1257..1310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 502..536
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1278..1301

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:1802593..1815832 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.414.3mRNA_P-littoralis_Contig1.414.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig1 1802593..1815832 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1.414.3 ID=prot_P-littoralis_Contig1.414.3|Name=mRNA_P-littoralis_Contig1.414.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1619bp
AGIRTVVDEFYDRSADGGGKQGSVLYECLSLLCGGAGAGGCGGGVVGGGG
FADCDAFVERLSFRLEQDRAQQNKKSADGSTDLEKSRVQLVSSLPDETLC
KLLASREATLTLQEYIAEHPNAEFRAFSISRLASACARCSSFLDRRAFVN
GAFEEGGDAQRYKQHARDWINDFFSSLPKICDDPSDAVAAAAFSAIEALL
QGHPLCVTAVNTELGNFWRSECEQRRKGVGEREEKGRVWVGGPITHNVFS
RHKQAFLSQRVGETVLRSALPRIRRLLHRQSRMTLVGKAQLAASAIRACA
SLLVAALRLSTSHTGIPILNPLLEKPTSVDFLGAKKKVRRNRSNGGSEEE
KEEEDLDVTLPPKDVAGDWVGVRLRAILEEGKNGDVLLVEAAAWATLRML
QTVAMGPLRKSMAPRVSEAFVRVLLAGQAATPKHSWPSLHAGQQEVAAGS
ALALRLAPPTATALLAPRVLASVERVPHPRQRLALLADVFFLLLVRPSRG
GRAPGGRGRSGDERNDSRDRRGSGGSSRPGAPREGAKMLVSVVEGEWFLS
LVSDTPGSCRTRRLLFREEAVAALTTTCAQILAAGTVAVMSPATGNAAAV
GVGTLARSCNSNGPVTVTAQQHPGKEGDHNDNPNGNKTVNFGASASALAA
ARAAAAAEKGRWSDLETWLDCSLSALEACTRCVNWTSSVGYVGGLAYVRL
LSLVLRLLCPLTAPAKDGHSEDAADDTDRLFFACCSGAVVVGKTLDGGRT
PGGEQGRLSWARQRLAHVVDDLMWRLREGLPGRDIRLRLLQATCTHVRLS
AVVGGDDRLAEDSASELVSVLQGELGELDTQAGFGTQTTRAPAVEGDGYE
PSGADNASGVDGNGGRGGGSSYSAGPGGGAGSAVPPAGPLGGPGQGGEER
AVGREHGGDANWGTSPFASGRRGSLTDVMTHELVIGCLVRLALAVEGETA
QEVLLVLERERGRARVRERLGRGAFGPMEDVVAKGIRAVQLLVLHRPATS
SKSTAGGTEALLLKRFLGTMDLGWQAAVQADERALTVISAETFDHGAHTF
PDLHRCLGRLLCHGVGVDLVNNGEGVIHTEGGGDGFAGSMEAAAAFEAHA
WEEEAPQAQLNGGSDPVVVTASHVIYHGGDIGGGSVVGEGETALGPSPWM
LAFADGDRDAADAAAGPGVVKKVASRGVRLRLRVYNATNTRLQGFSVRLS
FGQGTEAVGMGNGGKVESVVQEVLMPSAGHTLEVPVSPLDVLGDVIVHVT
VAFPDTEPESEFESEGTAELLGVETATRGSEVSGSGGGTPHFGQGQQSLD
SGAAEDGGGGDGVVGGSVPVVLYAGSYCVPAEAFLGSPKQATATWGGFQS
VWSGLPYVVAFPVESSSHSQQSGSMAAAAAAAAAAAAADEDGSVVLRTAR
SIWLAMMSAPPEGGSGRRGGDSRAAAAVACPFGNTDYALSTAWAFEAWDG
TPVLCALTAMKAPFCSPPTAFGGSGGGGAHEGQPSWHGRLEVRCCSHACS
EFAQCNQERFARFLTNEVFAPPVATHQEQQQHLFGGAFLPTTPATTASAG
GGGGGSGGPHPDWFSRTDTAPTSSSPAQAEGGVAPATGKIRPLVHALWEQ
RRVDTMQMASGARSKPAE*
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