prot_P-littoralis_Contig1.413.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1.413.1
Unique Nameprot_P-littoralis_Contig1.413.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length363
Homology
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BLAST of mRNA_P-littoralis_Contig1.413.1 vs. uniprot
Match: D7G502_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G502_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 8.030e-125
Identity = 215/339 (63.42%), Postives = 246/339 (72.57%), Query Frame = 0 
Query:   30 SQGFLGS----PTTTATFTDQQRCGAPRMALIPPRKPS-GAGVGSAAAGGDDSEKTPFGADDMLTTRSRITRAPLRITPNFQPHEKRRPKTDNRWDLTHGAFLTEESFDIAAMAWEEFSDFLRRTVERNVNGAQFDFDTRQWSSSIRKWWSRAVEMDVQAKADLFKLYDSSVGQRDAWGSQTIKVDARVEDEWDSIYVDCQDRTDVNYQDFSVSSDLSVDASGGLSSIGGRTEDVVPERNVGDAISGSASAVPAQSRREGERWHTS-GTISSGGSRSALMAAIDAYQAAAEEGAKDEEGREGERVGEG---KGFDKEDIIDCAIRGRWTFKNNDDPPHF 359
            +QGF+ S    PT   T T   RC  PR+AL PPRKP+ GAG GSAAAGGDD+     GA+D+L + S ITRAPLRITPNFQP EKRRPK +   D+T+GAFLTEESFDIAAMAWEEFSDFLRRTVERN+NGAQFDFDTRQWSSSIRKWWSRAVEMDVQAKADLF+LYDSSVGQRDA G+Q +KVDARVEDEWDSIYVDCQD  DV++QD+S  S +S    G  +       DV   R+       S+ A+P+  R+EG  W  S G+ S+GGSRSALMAA+DA+Q         EE        EG   +GFD E+IIDCAIRGRWTF NNDDP  F
Sbjct:   16 AQGFITSLPRLPTRDITPTPG-RCRVPRLALTPPRKPNTGAGAGSAAAGGDDNG----GANDVLKSTSGITRAPLRITPNFQPQEKRRPKFNVDKDVTYGAFLTEESFDIAAMAWEEFSDFLRRTVERNLNGAQFDFDTRQWSSSIRKWWSRAVEMDVQAKADLFRLYDSSVGQRDARGNQALKVDARVEDEWDSIYVDCQDVADVDFQDWSFDSSISGGVEGAATG-----SDVTGWRSS----ESSSEALPSSLRKEGGGWGASPGSASTGGSRSALMAAMDAFQ---------EEXXXXXXXXEGTGSEGFDDEEIIDCAIRGRWTFTNNDDPGCF 331
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BLAST of mRNA_P-littoralis_Contig1.413.1 vs. uniprot
Match: A0A836CHX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHX3_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.390e-11
Identity = 38/104 (36.54%), Postives = 54/104 (51.92%), Query Frame = 0 
Query:   98 PLRITPNFQPHEKRRPK-TDNRWDLTHGAFLTEESFD--------IAAMAWEEFSDFLRRTVERNVNGAQFDFDTRQWSSSIRKWWSRAVEMDVQAKADLFKLY 192
            PLRI  N  P     P+   N  +     +    + D        +AAMA  EF D++ RT+ RN+ G  F+FDTRQW +S+ KWW RA+E D  A+ +  + Y
Sbjct:   67 PLRIMANLSPRSSGGPRGMRNMQEREFSTYQNAATVDRLNLHFEPMAAMACAEFKDWVARTLARNLEGHAFEFDTRQWQTSVAKWWGRALEADETARLEFARQY 170
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G502_ECTSI8.030e-12563.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CHX3_9STRA1.390e-1136.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..336
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..336

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:1792103..1797328 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.413.1mRNA_P-littoralis_Contig1.413.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1 1790850..1797515 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1.413.1 ID=prot_P-littoralis_Contig1.413.1|Name=mRNA_P-littoralis_Contig1.413.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=363bp
MRPSSARATHLLFLPAVAAALALVSLPRSSQGFLGSPTTTATFTDQQRCG
APRMALIPPRKPSGAGVGSAAAGGDDSEKTPFGADDMLTTRSRITRAPLR
ITPNFQPHEKRRPKTDNRWDLTHGAFLTEESFDIAAMAWEEFSDFLRRTV
ERNVNGAQFDFDTRQWSSSIRKWWSRAVEMDVQAKADLFKLYDSSVGQRD
AWGSQTIKVDARVEDEWDSIYVDCQDRTDVNYQDFSVSSDLSVDASGGLS
SIGGRTEDVVPERNVGDAISGSASAVPAQSRREGERWHTSGTISSGGSRS
ALMAAIDAYQAAAEEGAKDEEGREGERVGEGKGFDKEDIIDCAIRGRWTF
KNNDDPPHFSPQ*
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