prot_P-littoralis_Contig1.379.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1.379.4
Unique Nameprot_P-littoralis_Contig1.379.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length521
Homology
BLAST of mRNA_P-littoralis_Contig1.379.4 vs. uniprot
Match: D8LI39_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI39_ECTSI)

HSP 1 Score: 344 bits (882), Expect = 2.800e-110
Identity = 209/404 (51.73%), Postives = 244/404 (60.40%), Query Frame = 0
Query:   45 TLWEQMTAREGRDAARPAGMRAGDWQAERQLQEALRESRQEADTTGGASAPSGNGKSGEERSFIDAGFHALATDAVDGEEGKSASSSDGQKLAPRNADDANGKGRGRTAMMDSNGGAVAARRGAAAAAGDNANDTQGMIGSEEGREAGEEEDEDFGNVELVVTKDGRIIPGAAVAAVVGDYVAVAVLESENSQTEGRGVRNDGVGVGID--------EGGGASAGGIVH-SAVSKGQETDEGEEGXXXXXXXXXXXXXXPLPPDIMLTLADDVLHRIMLFLNPEEIFECRAVSSRWDFPGHEAVFEGLCRRTYLAQSAKKLLNVKRWRSWQRMFKFRPRLRDTGLYSLKTTYFKKPVRDMSTDWTPGKVLRVTYYRYFRFFGDGRVAYGLTHDNPREFVRMMQE 439
            TLWEQMTAREG+DAAR AGMRAGDWQAERQLQEALRESRQ+    G AS+  G+G+  +E SF+D GFHALAT+AV+GEEG+  ++                                                                  ED+G+VELVVT+DG IIP A  A                                          E  GA+A    H   ++   + ++GEE               PLPPDI+LT+ DD+LHR MLFLNPE+IFECRAVSSRW FPGHE V+EGLCRRTYLAQSAKK+LNVKRWRSWQRMFKFRPRLRDTGLYSLKTTYFKKPVRDMST+WTPGK+LRVTYYRYF+FFGDGRVAY LTH+ P++FVRM+Q+
Sbjct:   64 TLWEQMTAREGKDAARLAGMRAGDWQAERQLQEALRESRQDGGPVGVASSLEGSGREDDEASFVDTGFHALATNAVEGEEGEGEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------XXXXXXXXXXXXXXXXXXEDYGDVELVVTQDGGIIPVATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEDVGAAAADNEHLPKIATAMDEEQGEE-------------VTPLPPDIVLTMPDDILHRTMLFLNPEDIFECRAVSSRWSFPGHENVYEGLCRRTYLAQSAKKMLNVKRWRSWQRMFKFRPRLRDTGLYSLKTTYFKKPVRDMSTEWTPGKILRVTYYRYFKFFGDGRVAYALTHEPPKDFVRMLQD 434          
BLAST of mRNA_P-littoralis_Contig1.379.4 vs. uniprot
Match: A0A6H5KRR7_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRR7_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 7.700e-47
Identity = 139/337 (41.25%), Postives = 171/337 (50.74%), Query Frame = 0
Query:   40 DSGDT--TLWEQMTAREGRDAARPAGMRAGDWQAERQLQEALRESRQEADTTGGASAPSGNGKSGEERSFIDAGFHALATDAVDGEEGKSASSSDGQKLAPRNADDANGKGRGRTAMMDSNGGAVAARRGAAAAAGDNANDTQGMIGSEEGREAGEEEDEDFGNVELVVTKDGRIIPGAAVAAVVGDYVAVAVL-----------------------ESENSQTEGRGVRNDGVGVGIDEGGGASAGGIVHSAVSKGQETDEGEEGXXXXXXXXXXXXXXPLPPDIMLTLADDVLHRIMLFLNPEEIFECRAVSSRWDFPGHEAVFEGLCRRTYLAQ 351
            DS D   TLW+QMTAREG+DAAR AGMRAGDWQAERQLQEALRESRQ+    G  S   G+G+ G+E SF+D GFHALAT+A++GEEG+      G+     + + A+ +G+                                                 +G+VELVVT+DG IIP AA +   G                               +      EG GVR   VGV  ++ G A         + K     + E+G              PLPPDI+LTL DD+LHR MLFLNPE+IFECRAVS+RW FP HE V+EGLCRRTYLAQ
Sbjct:   54 DSSDVCNTLWDQMTAREGKDAARRAGMRAGDWQAERQLQEALRESRQDDGPVGVTSILEGSGREGDEASFVDMGFHALATNALEGEEGE------GEAATAADTEVASSRGQPGXXXXXXXXXXXXXXX---------------XXXXXXXXXXXXXXXXXYGDVELVVTQDGGIIPVAAGSVGDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXHDHKLAKKAFEG-GVR---VGVAAEDVGAAXXXXXXADHLPKNATAIDEEQGEEVT----------PLPPDIVLTLPDDILHRTMLFLNPEDIFECRAVSTRWSFPEHEKVYEGLCRRTYLAQ 355          
BLAST of mRNA_P-littoralis_Contig1.379.4 vs. uniprot
Match: W7T952_9STRA (FBO_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T952_9STRA)

HSP 1 Score: 104 bits (260), Expect = 6.230e-21
Identity = 57/142 (40.14%), Postives = 81/142 (57.04%), Query Frame = 0
Query:  299 DIMLTLADDVLHRIMLFLNPEEIFECRAVSSRWDFPGHEAVFEGLCRRTYLAQSAKKLLNVKRWR-SWQRMFKFRPRLRDTGLYSLKTTYFKKPVRDMSTDWTPGKVLRVTYYRYFRFFGDGRVAYGLTHDNPREFVRMMQE 439
            D    + D+VLHRI+ F++ +        S RW     E + +  C R YL Q+  K LN  R++ SW+ M + RPR+R  G Y L ++Y KKP++DM T+ TPG +L V YYRY RF   GR+ Y L +  P E V + +E
Sbjct:   67 DYASAMPDEVLHRILTFVDIDTGVASTMSSQRWRPLFDERICQAHCERIYLDQAHVKRLNPARFQGSWKAMLQTRPRVRTNGFYFLLSSYIKKPIKDMWTEITPGTILEVRYYRYLRFLPGGRLVYALLYLPPPEAVSLFKE 208          
BLAST of mRNA_P-littoralis_Contig1.379.4 vs. uniprot
Match: D8R5V6_SELML (F-box domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R5V6_SELML)

HSP 1 Score: 72.8 bits (177), Expect = 2.240e-10
Identity = 50/166 (30.12%), Postives = 81/166 (48.80%), Query Frame = 0
Query:  304 LADDVLHRIMLFLNPEEIFECRAVSSRWDFPGHEAVFEGL-CRRTYL---AQSAKKLLNVKRWRSWQRMFKFRPRLRDTGLYSLKTTYFKKPVRDMSTDWTPGKVLRVTYYRYFRFFGDGRVAYGLTHDNPREFVRMMQEGSPK--VVYGTYTISKWEVKVEIPNP 463
            L++D+LH I + L+P  + +   V  +W +     VF  L C +T+     +  +K+L+     SW++M+  RPRLR  G+Y  + TY +  V +         V  V YYRY RFF +GR  Y  T    +E  + M   + K     G YT+++ +V   +  P
Sbjct:   55 LSEDILHEIFMRLSPYTLGKASCVCRKWRYAIRNPVFWRLACLKTWQLHGVEGNRKILSQNYDGSWRKMWHHRPRLRFDGIYVSRNTYIRAGVAEWKVT---NPVHLVCYYRYIRFFPNGRFLYKNTALRLKEIAKTMNRRATKENTYGGRYTLAQSQVDAAVVYP 217          
BLAST of mRNA_P-littoralis_Contig1.379.4 vs. uniprot
Match: UPI0009E47202 (F-box protein 7 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E47202)

HSP 1 Score: 62.0 bits (149), Expect = 8.450e-7
Identity = 52/208 (25.00%), Postives = 92/208 (44.23%), Query Frame = 0
Query:  304 LADDVLHRIMLFLNPEEIFECRAVSSRWDFPGHEAV-FEGLCRRTYLAQSAKKLLNVKRWR-----SWQRMFKFRPRLRDTGLYSLKTTYFKKPVRDMSTDWTPGKVLRVTYYRYFRFFGDGRVAYGLTHDNPREFVRMMQEGSPK--VVYGTYTISKWEVKVEIPNPWS---WVNFTLQLANGERGRFTHLVMLRHSSVPRNDTRVG 500
            L D++L  + L ++P  +     V  +W +  H  + +   C +T+    A  L N K  +     SW++M+  RPR+R+ GLY  + TY +  V +         V  V Y+RY RFF +G+  Y ++    +E  ++M   S    V  G  T+S  ++   +    S    +   L++     G    L MLR  +   N++ + 
Sbjct:   63 LPDELLFEVFLRMSPFSLGRAACVCRKWRYTIHNPILWRRACLKTWQLSGA--LTNYKMVQFMFEGSWRKMWISRPRIRNDGLYVSRNTYIRTGVAEWKVT---NPVHLVCYFRYLRFFPNGKFLYKISSQKVKEVAKIMIRASKAECVFQGESTLSDDQINAVLVYSGSRRTLLRMRLRIRGTTIGANNRLDMLRLVTTGLNESEIS 265          
BLAST of mRNA_P-littoralis_Contig1.379.4 vs. uniprot
Match: A0A5P1EBA5_ASPOF (F-box domain-containing protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1EBA5_ASPOF)

HSP 1 Score: 62.0 bits (149), Expect = 8.500e-7
Identity = 45/174 (25.86%), Postives = 83/174 (47.70%), Query Frame = 0
Query:  297 PPDIMLTLADDVLHRIMLFLNPEEIFECRAVSSRWDFP-GHEAVFEGLCRRTYLAQSAK---KLLNVKRWRSWQRMFKFRPRLRDTGLYSLKTTYFKKPVRDMSTDWTPGKVLRVTYYRYFRFFGDGRVAYGLTHDNPREFVRMM--QEGSPKVVY-GTYTISKWEVKVEIPNP 463
            P  I  +L D++++ +    +P  +     V  +W +   + ++++  C R +    A    K++      SW++M+  RPR+R  GLY  + TY +  V +         V  V YYRY RF+ +GR+ Y ++    +E  + M  +   P  VY G Y +++ +V+  I  P
Sbjct:   56 PALIHRSLPDELIYEVFARADPYSLGRAACVCRKWRYTIRNPSLWQNACLRAWQLSGASENYKIVTSMYDCSWRKMWTHRPRVRFDGLYVSRNTYVRVGVAEWKVT---NPVHLVCYYRYIRFYPNGRLLYKVSSQRVKEAAKCMHLRASKPDCVYKGEYRLAEDQVEAAILYP 226          
BLAST of mRNA_P-littoralis_Contig1.379.4 vs. uniprot
Match: A0A7J7MD57_9MAGN (F-box domain-containing protein n=2 Tax=Magnoliopsida TaxID=3398 RepID=A0A7J7MD57_9MAGN)

HSP 1 Score: 61.2 bits (147), Expect = 1.750e-6
Identity = 47/170 (27.65%), Postives = 80/170 (47.06%), Query Frame = 0
Query:  304 LADDVLHRIMLFLNPEEIFECRAVSSRWDF----PGHEAVFEGLCRRTYLAQSAK---KLLNVKRWRSWQRMFKFRPRLRDTGLYSLKTTYFKKPVRDMSTDWTPGKVLRVTYYRYFRFFGDGRVAYGLTHDNPREFVRMMQEGSPK---VVYGTYTISKWEVKVEIPNP 463
            L D++L+ +   +NP  + +   V  +W +    P H   +   C RT+         ++L  K   SW++M+  RPR+R  GLY  + TY +  + +    + P  V  V YYRY RFF +G+  Y  +    ++  + M   + K   V  G YT++  +V+  I  P
Sbjct:   88 LPDELLYEVFARMNPYSLGKAACVCRKWRYTIRIPLH---WRNACLRTWQISGPVENYRILQSKYDGSWRKMWLLRPRIRTDGLYVSRNTYIRVGIAEWRV-YNP--VHLVCYYRYMRFFPNGKFLYMNSSQKLKDVAKYMNFRASKTESVFSGKYTLTDDKVEAAILYP 251          
BLAST of mRNA_P-littoralis_Contig1.379.4 vs. uniprot
Match: A0A8H7VMP6_9FUNG (F-box domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VMP6_9FUNG)

HSP 1 Score: 61.2 bits (147), Expect = 2.480e-6
Identity = 50/157 (31.85%), Postives = 75/157 (47.77%), Query Frame = 0
Query:  346 RTYLAQSAKKLLNVKRWRSWQRMFKFRPRLRDTGLYSLKTTYFKKPVRDMSTDWTPGKVLRVTYYRYFRFFGDGRVAYGLTHDNPREFVRMMQEGSPK--VVYGTYTIS--KWEVKVEIPN---PWSWVNFTLQLANGERGRFTHLVMLRHSSVPRN 495
            R Y  +  K L N      W  MF  RPRLR  G+Y +    + +P R  +  WT   V  VTYYRY RFF DGR+   L+ + P++ +R++     +  V +G + +     +V VE+ +   P    N  L + +  RGR   L  L ++S   N
Sbjct:  274 RLYQTEFVKTLYNG----YWLGMFIERPRLRYDGVY-ISVCQYIRPGRSDTNAWTQ-PVHLVTYYRYLRFFPDGRIVKYLSTEEPKDVIRLLTPDFSRRQVFHGKFCLDDDNGQVAVEMRDKTRPRDRFNMLLYIKSTSRGRHNKLGWLSYTSKKDN 424          
BLAST of mRNA_P-littoralis_Contig1.379.4 vs. uniprot
Match: A9SN35_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9SN35_PHYPA)

HSP 1 Score: 60.1 bits (144), Expect = 3.430e-6
Identity = 41/146 (28.08%), Postives = 69/146 (47.26%), Query Frame = 0
Query:  303 TLADDVLHRIMLFLNPEEIFECRAVSSRWDFPGH-EAVFEGLCRRTYLA---QSAKKLLNVKRWRSWQRMFKFRPRLRDTGLYSLKTTYFKKPVRDMSTDWTPGKVLRVTYYRYFRFFGDGRVAYGLTHDNPREFVRMMQEGSPKV 444
            +L D++L  + + L+P  +     V  +W +     +++   C +T+     Q  ++L   K   SW+ M+  RPRLR  GLY  + TY +  + +         V  V YYRY RFF +G+  Y  T    +E  + MQ  + K+
Sbjct:   54 SLPDELLQEVFMRLSPYWLGRAACVCRKWRYATRMPSLWRNACLKTWQVSGRQENERLCAEKYGGSWRAMWHDRPRLRFDGLYVSRNTYIRTGIAEWKIT---NPVHLVCYYRYLRFFPNGKFLYKTTPLRVKEVAKTMQGRAAKL 196          
BLAST of mRNA_P-littoralis_Contig1.379.4 vs. uniprot
Match: A0A175W378_9PEZI (F-box protein pof7 n=1 Tax=Madurella mycetomatis TaxID=100816 RepID=A0A175W378_9PEZI)

HSP 1 Score: 60.8 bits (146), Expect = 3.800e-6
Identity = 37/104 (35.58%), Postives = 48/104 (46.15%), Query Frame = 0
Query:  364 SWQRMFKFRPRLRDTGLYSLKTTYFKKPVRDMSTDWTPGKVLRVTYYRYFRFFGDGRVAYGLTHDNPREFV----RMMQEGSPKVVYGTYTISKWEVKVEIPNP 463
            SWQRMF+FRPR+R  G Y     Y +  + +++T      V  VTYYRY RFF DG      T   P + V    R       KV   +    +W +  E  NP
Sbjct:  351 SWQRMFRFRPRIRFNGCYICTVNYIRSGLANVNTITWNTPVHIVTYYRYLRFFRDGTAISLQTTAEPADVVHHLTREFVASGSKVAEHSILKGRWRLAREADNP 454          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.379.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LI39_ECTSI2.800e-11051.73F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRR7_9PHAE7.700e-4741.25F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
W7T952_9STRA6.230e-2140.14FBO_C domain-containing protein n=2 Tax=Monodopsid... [more]
D8R5V6_SELML2.240e-1030.12F-box domain-containing protein n=2 Tax=Selaginell... [more]
UPI0009E472028.450e-725.00F-box protein 7 n=1 Tax=Phalaenopsis equestris Tax... [more]
A0A5P1EBA5_ASPOF8.500e-725.86F-box domain-containing protein n=2 Tax=Asparagus ... [more]
A0A7J7MD57_9MAGN1.750e-627.65F-box domain-containing protein n=2 Tax=Magnoliops... [more]
A0A8H7VMP6_9FUNG2.480e-631.85F-box domain-containing protein n=1 Tax=Mucor circ... [more]
A9SN35_PHYPA3.430e-628.08Predicted protein n=2 Tax=Physcomitrium patens Tax... [more]
A0A175W378_9PEZI3.800e-635.58F-box protein pof7 n=1 Tax=Madurella mycetomatis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR045464F-box protein Hrt3/FBXO9, C-terminalPFAMPF19270FBO_Ccoord: 362..463
e-value: 8.1E-17
score: 61.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..48
NoneNo IPR availablePANTHERPTHR12874:SF9F-BOX ONLY PROTEIN 9coord: 278..442
IPR045118F-box only protein FBXO9/FBXO48PANTHERPTHR12874F-BOX ONLY PROTEIN 48-RELATEDcoord: 278..442
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 287..375

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:1641246..1654977 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.379.4mRNA_P-littoralis_Contig1.379.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig1 1640136..1654992 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1.379.4 ID=prot_P-littoralis_Contig1.379.4|Name=mRNA_P-littoralis_Contig1.379.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=521bp
MADGNKEADPALAAGGAGGGEDESTAAASANADATSVTADSGDTTLWEQM
TAREGRDAARPAGMRAGDWQAERQLQEALRESRQEADTTGGASAPSGNGK
SGEERSFIDAGFHALATDAVDGEEGKSASSSDGQKLAPRNADDANGKGRG
RTAMMDSNGGAVAARRGAAAAAGDNANDTQGMIGSEEGREAGEEEDEDFG
NVELVVTKDGRIIPGAAVAAVVGDYVAVAVLESENSQTEGRGVRNDGVGV
GIDEGGGASAGGIVHSAVSKGQETDEGEEGEGDAEGEEDEEEEEPLPPDI
MLTLADDVLHRIMLFLNPEEIFECRAVSSRWDFPGHEAVFEGLCRRTYLA
QSAKKLLNVKRWRSWQRMFKFRPRLRDTGLYSLKTTYFKKPVRDMSTDWT
PGKVLRVTYYRYFRFFGDGRVAYGLTHDNPREFVRMMQEGSPKVVYGTYT
ISKWEVKVEIPNPWSWVNFTLQLANGERGRFTHLVMLRHSSVPRNDTRVG
RCHHSVKSTDFFTFRRVWQF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR045464Hrt3/FBXO9_C
IPR045118FBXO9/FBXO48
IPR036047F-box-like_dom_sf