prot_P-littoralis_Contig1.376.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1.376.1
Unique Nameprot_P-littoralis_Contig1.376.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length252
Homology
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BLAST of mRNA_P-littoralis_Contig1.376.1 vs. uniprot
Match: D8LI36_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI36_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 3.350e-74
Identity = 125/170 (73.53%), Postives = 143/170 (84.12%), Query Frame = 0 
Query:   70 KRPKEQLDEVPLTISSVVSRDSKASLLVHLRDETLNFAGDTGAVGRIAVGSKKKGRGLVFDLKGRQFSGQIIPSATVLVVGVGRSEAKVEGVFSEVCRLDYMGNVFDSMGGEVLKGEMDASYRFEEEDVNARGGGVEEDGDG------KGDGGKTPKLGRKTSFGRKRGG 233
            K+ KE+LDEVPL +   V +D+KASLLVHLRDE LNFAGDTGA+GRI+VG KKKGRGL FDLKG+QFSGQIIPSATV+VVG+G++EAKVEG+FSEVCRLDY GNVFD+MGGEVLKGEMD SY+FEEEDVNARGG     GD       KG+ GK+PKL RK SFG+ RGG
Sbjct:   50 KQQKEKLDEVPLIVPPAVCKDAKASLLVHLRDEALNFAGDTGAIGRISVGGKKKGRGLTFDLKGQQFSGQIIPSATVMVVGIGKTEAKVEGLFSEVCRLDYKGNVFDAMGGEVLKGEMDDSYKFEEEDVNARGGAG---GDXXXXXRDKGEEGKSPKLTRKKSFGKGRGG 216
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BLAST of mRNA_P-littoralis_Contig1.376.1 vs. uniprot
Match: A0A803PRU0_CANSA (Uncharacterized protein n=3 Tax=Cannabis sativa TaxID=3483 RepID=A0A803PRU0_CANSA)

HSP 1 Score: 66.6 bits (161), Expect = 5.130e-9
Identity = 55/158 (34.81%), Postives = 86/158 (54.43%), Query Frame = 0 
Query:   80 PLTISSVVSRDSKASLLVHLRDETLNFAGDTGAVGRIAVGSKKKGRGLVF-DLKGRQFSGQIIPSATVLVVGVGRSEAKVEGVFSEVCRLDYMGNVFDSMGGEVLKGEMDA-SYRFEEEDVN---ARGGGVEEDGDGKGDGGKTPKLGRKTSFGRKRG 232
            PL +S  V R +KA  LV    ++++ AGD GAVGR+ +     G   ++ DLKG  +   I+PS T  VV  G+SEAK+E + ++  +L    NVF+S    +++G +D  S+  +EE      A+   + EDG+ K +G    K  + +   RKRG
Sbjct:  234 PLILSEKVQR-TKA--LVECEGDSIDLAGDIGAVGRVVISDAASGDPEMYLDLKGTIYKTTIVPSRTFCVVSFGQSEAKIEAIMNDFIQLKPQSNVFESE--TMVEGTLDGFSFDSDEEGEKVPKAQQTELGEDGEEKTNGKSKGKAEKASGVARKRG 386
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BLAST of mRNA_P-littoralis_Contig1.376.1 vs. uniprot
Match: A0A2P6V702_9CHLO (DNA-binding BIN4-like isoform A n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V702_9CHLO)

HSP 1 Score: 58.2 bits (139), Expect = 3.440e-6
Identity = 32/92 (34.78%), Postives = 59/92 (64.13%), Query Frame = 0 
Query:  105 NFAGDTGAVGRIAVGSKKKGRGLVFDLKGRQFSGQIIPS-ATVLVVGVGRSEAKVEGVFSEVCRLD----YMGNVFDSMGGEVLKGEMDASY 191
            + +GD+GA+GR+ +G  K+   L  D+KG  ++  ++P  AT+ ++ +G+SEAKVE +F+E  +L     +  N  D +GG +++G+ D +Y
Sbjct:  221 DLSGDSGAIGRLMIGGSKEEPQLQLDVKGVLYNATVVPCPATIALINMGQSEAKVECLFTEFVQLREDTRFSFNDADQLGG-LVEGDDDGNY 311
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.376.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LI36_ECTSI3.350e-7473.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A803PRU0_CANSA5.130e-934.81Uncharacterized protein n=3 Tax=Cannabis sativa Ta... [more]
A0A2P6V702_9CHLO3.440e-634.78DNA-binding BIN4-like isoform A n=2 Tax=Micractini... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..251
IPR033246DNA-binding protein BIN4PANTHERPTHR34810DNA-BINDING PROTEIN BIN4coord: 23..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:1622520..1627913 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.376.1mRNA_P-littoralis_Contig1.376.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1 1622387..1628868 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1.376.1 ID=prot_P-littoralis_Contig1.376.1|Name=mRNA_P-littoralis_Contig1.376.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=252bp
MDEDGENNSSKSSDVSDEGEMITPEESTPQSSRRLSQTQQSQNQNEQSQS
KGDAKPETNGGEGAAASQSKRPKEQLDEVPLTISSVVSRDSKASLLVHLR
DETLNFAGDTGAVGRIAVGSKKKGRGLVFDLKGRQFSGQIIPSATVLVVG
VGRSEAKVEGVFSEVCRLDYMGNVFDSMGGEVLKGEMDASYRFEEEDVNA
RGGGVEEDGDGKGDGGKTPKLGRKTSFGRKRGGGAGSSSARKGGAKKSKK
S*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033246BIN4