prot_P-littoralis_Contig1.17.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1.17.4
Unique Nameprot_P-littoralis_Contig1.17.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length954
Homology
BLAST of mRNA_P-littoralis_Contig1.17.4 vs. uniprot
Match: D8LPZ3_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ3_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 1.110e-44
Identity = 125/216 (57.87%), Postives = 147/216 (68.06%), Query Frame = 0
Query:   87 LQMCKELRSICLIWTRNRKAILAAAKASXXXXXXXXXXXXXXXXXXXAAEETRPSGHRRVRGLGAGQGR--DGGRMQKVYYHQLNETKIKQKLIEVGLPVGGGKAAMVERHKRLALLDAASNDREVPLKRRELIRQVAVWEEAKDKEKKATAARSAAGGVVAAPAXXXXXXXXXXXXXXXXXXXXAGEASVPPEAEKIVIPKKMQAGFSALIASAR 300
            LQ+ KELRSIC  W  NR+AILAAA AS XXXXXXXXXXXX        E+  PSG R+V  +GAGQGR  DGG ++ V+YH LN++K+K  LI VGLPVGGGKAAMV RHKRL LL AASNDREVPL + +L+RQVA WE  KDKE+ A A ++A  G+V+  A                 XXX       PE+EKIVI K+M+ GFSALIASAR
Sbjct:    2 LQLSKELRSICTTWKHNRRAILAAANASAXXXXXXXXXXXXR-------EQPAPSGRRKVCAIGAGQGRVGDGGVVKAVHYHSLNDSKMKALLIRVGLPVGGGKAAMVARHKRLVLLSAASNDREVPLPKAQLLRQVAAWEREKDKERMANA-KTARAGLVSGSAGSGGGSRQALRPAGTGGXXXXXXXXXXPESEKIVISKEMKDGFSALIASAR 209          
BLAST of mRNA_P-littoralis_Contig1.17.4 vs. uniprot
Match: A0A6H5JRB6_9PHAE (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRB6_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 9.340e-31
Identity = 215/648 (33.18%), Postives = 257/648 (39.66%), Query Frame = 0
Query:  370 DGVGKRRTINNTAIGNGIAPWHDAGGAADMQILGVAGRMIRTRGPWQCAFSSGVPPPPSPLTSVAKRQGSGPVPVAAVTAAA--------------AAGDNRPAKECAEKQEEKDRSTGKDPISASGGCPGNS---DTRNGCADAAASGGRVNEHGGERPAVAINGLARRVSSESGARDDDDVGDSEASGRGKATDTVPA-EAVRDAGFLYVNTTTGETAREPPAELCARREEARSAGEYLVFVPSHSFVAAVAS---------NSTVCTDIAAS-------------------------------GEAVPMSSSLSEAASAVGAAAERVLQAVDNG-----PCSSARDEAAAEADXXXXXXXRRTAAAPEPCGRQEQRSSYQ--SPLEAPTPPTAVKRE---------GGTPSGSGGSGGETWDRFSSLPTIDLSQGVASAPLDVDDVGTXXXXXXXXXXXACSXXXXXXVGPAEGAGKVVATMWTCDDCTLLNVTRRTICEVCKKPRSENFGPRHGVVKRGKDEG----------VGGLSGRAGSGKLRLGQRRNSGSAPQSSITSFTARPVPPEIADNGKGKXXXXXXXXXXXXXXXXXXXXXXXXAGPCSRSSLHPSPPPAGASLTAAVAPTNFFPTVRSQERS 933
            D  G R  +  +++  G+A  +DA G A  +ILGVAGR++RTRGPW+C FS G      P  SV + + +G    AA                   AAG  R  + C    E   RS G   +  +GGC  N       +G   AA  GG  +   G +    ++ +A   ++E G       G+    G G+     P  E   D G +Y+NT T ET REPPAEL A  ++A SAG+YLVFVPSH FVAA A          NS V    A S                                 A    + +SEA SAVGAA ER   AV        P             XXXXXXX      P   GR EQ    Q  SPLEA T  + V +                       TWDR SSLPTIDLSQGVASAPLDV++ G                      G        VAT WTC  CTL N  RRT CE+C   R +    R                     VG +S      KLRL Q   S      SIT FT+RP                            XXXXXXXX          P PP    S  A   P N FP+VRSQERS
Sbjct:  241 DAGGCRSLVGRSSVVGGVASRNDAAGDA-AEILGVAGRLVRTRGPWRCIFSQGR----QPSASVGEVRNNGTAEAAAAAGVMXXXXXXXXXXXXXXAAGVMRRTEGCKSAGERALRSAGGYGVERNGGCASNGVGESNGSGVGAAATVGG--DGRSGSKTTQELSVVA--AAAEDGRAGFGGSGEGRDRGGGQEEAARPVREPGADQGPVYLNTATMETVREPPAELVALADQAESAGDYLVFVPSHRFVAAAAGAVPAPASSHNSNVAAAPAFSHCSSNMDVESNXXXXXXXXXXXXXXXXXXXXXXAAVTVARMSEATSAVGAAGEREQPAVTAASESCSPXXXXXXXXXXXXXXXXXXXXXXVGPNPRRNGRGEQAQDTQQGSPLEASTTLSTVAKAVLGXXXXXXXXXXXXXXXXXXXTWDRLSSLPTIDLSQGVASAPLDVENAG----------------------GTGGNKAVTVATTWTCVACTLTNKARRTTCELCGTSRPKASQQRXXXXXXXXXXXXXXXXXXHRRVGSVS------KLRLRQPARS-----PSITPFTSRPA-------------------------GGXXXXXXXXXXXXXXXXXSPQPP---LSQPAGTTPINGFPSVRSQERS 818          
BLAST of mRNA_P-littoralis_Contig1.17.4 vs. uniprot
Match: D8LPZ5_ECTSI (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ5_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 1.210e-20
Identity = 115/296 (38.85%), Postives = 130/296 (43.92%), Query Frame = 0
Query:  569 ETAREPPAELCARREEARSAGEYLVFVPSHSFVAAVAS---------NSTVCT-----------DIAASGEAVPMSSSLS-------------------EAASAVGAAAERVLQAVDNG--PCSSARDEAAAEADXXXXXXX------------RRTAAAPEPCGRQEQRSSYQSPLEAPTPPTAVKRE-------GGTPSGSGGSGGETWDRFSSLPTIDLSQGVASAPLDVDDVGTXXXXXXXXXXXACSXXXXXXVGPAEGAGKVVATMWTCDDCTLLNVTRRTICEVCKKPR 804
            ETAREPPAEL A  ++A SAG+YLVFVPSH FVAA A          NS V             D+  +G     +S+LS                   EAASAV AAAERVLQAV      CS           XXXXXXX            RR +      G Q Q +    PLEA T P+ V +                     TWDR SSLPTIDLSQGVASAP+DV++ G                      G        VAT WTC  CTL N +RRT CEVC   R
Sbjct:    2 ETAREPPAELVALADQAESAGDYLVFVPSHRFVAAAAGAVPASASSRNSNVAAAPVFSHRSSNMDVDGNGSNPAAASALSHNSNMDTDSNAAVTVARMSEAASAVVAAAERVLQAVTAAGESCSPXXXXXXXXXXXXXXXXXXXXXXXXXGSNTRRNSR-----GEQAQDTQQGLPLEASTTPSTVAKAVLGXXXXXXXXXXXXXXXXGTWDRLSSLPTIDLSQGVASAPVDVENGG----------------------GAGGNKAVTVATTWTCVACTLTNKSRRTTCEVCGTSR 270          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.17.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LPZ3_ECTSI1.110e-4457.87SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JRB6_9PHAE9.340e-3133.18RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
D8LPZ5_ECTSI1.210e-2038.85RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 214..234
NoneNo IPR availableGENE3D2.30.30.380coord: 775..821
e-value: 3.7E-6
score: 28.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..355
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 875..889
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 811..953
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 647..727
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 711..727
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 838..856
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 525..541
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 919..953
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..336
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 458..475
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 444..551
NoneNo IPR availablePANTHERPTHR14134:SF2E3 UBIQUITIN-PROTEIN LIGASE RAD18coord: 156..376
NoneNo IPR availablePANTHERPTHR14134:SF2E3 UBIQUITIN-PROTEIN LIGASE RAD18coord: 25..78
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 26..76
IPR003034SAP domainSMARTSM00513sap_9coord: 165..199
e-value: 0.0027
score: 26.9
IPR003034SAP domainPROSITEPS50800SAPcoord: 165..199
score: 8.907411
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 779..803
e-value: 2.0E-5
score: 34.0
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 781..800
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 770..806
score: 8.478953
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 26..83
e-value: 4.3E-10
score: 40.8
IPR039577E3 ubiquitin-protein ligase Rad18PANTHERPTHR14134E3 UBIQUITIN-PROTEIN LIGASE RAD18coord: 25..78
IPR039577E3 ubiquitin-protein ligase Rad18PANTHERPTHR14134E3 UBIQUITIN-PROTEIN LIGASE RAD18coord: 156..376
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 34..74
score: 9.937009
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 779..804

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:148706..160063 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.17.4mRNA_P-littoralis_Contig1.17.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig1 148228..160454 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1.17.4 ID=prot_P-littoralis_Contig1.17.4|Name=mRNA_P-littoralis_Contig1.17.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=954bp
MKPSEDDADDDEVYQYPKAGLGPVFASMESLLRCAICRGLSGPPVSLPCC
QQTFCSLCIRQYLDCAKPRCPCCRSEGKSIAEAAGPLQMCKELRSICLIW
TRNRKAILAAAKASSDAAAAAGGATAAPAPSPAAAEETRPSGHRRVRGLG
AGQGRDGGRMQKVYYHQLNETKIKQKLIEVGLPVGGGKAAMVERHKRLAL
LDAASNDREVPLKRRELIRQVAVWEEAKDKEKKATAARSAAGGVVAAPAT
AAPGAAGGRAGQPARSVEGAGEASVPPEAEKIVIPKKMQAGFSALIASAR
KNAKKRSSISDSADGASGNSSVVKKARVSEDSISTSDRGGGDGGGDGGSD
GAVICNGSLSEDGAYHNSGDGVGKRRTINNTAIGNGIAPWHDAGGAADMQ
ILGVAGRMIRTRGPWQCAFSSGVPPPPSPLTSVAKRQGSGPVPVAAVTAA
AAAGDNRPAKECAEKQEEKDRSTGKDPISASGGCPGNSDTRNGCADAAAS
GGRVNEHGGERPAVAINGLARRVSSESGARDDDDVGDSEASGRGKATDTV
PAEAVRDAGFLYVNTTTGETAREPPAELCARREEARSAGEYLVFVPSHSF
VAAVASNSTVCTDIAASGEAVPMSSSLSEAASAVGAAAERVLQAVDNGPC
SSARDEAAAEADGNGDGSGRRTAAAPEPCGRQEQRSSYQSPLEAPTPPTA
VKREGGTPSGSGGSGGETWDRFSSLPTIDLSQGVASAPLDVDDVGTGNGK
GGGGTGEACSAGGGEGVGPAEGAGKVVATMWTCDDCTLLNVTRRTICEVC
KKPRSENFGPRHGVVKRGKDEGVGGLSGRAGSGKLRLGQRRNSGSAPQSS
ITSFTARPVPPEIADNGKGKGSGRGSMVASSSATATATAAATAAAGPCSR
SSLHPSPPPAGASLTAAVAPTNFFPTVRSQERSSSAAASTATTPAAAADK
TQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR001876Znf_RanBP2
IPR013083Znf_RING/FYVE/PHD
IPR039577Rad18
IPR001841Znf_RING
IPR036443Znf_RanBP2_sf