mRNA_P-littoralis_Contig995.6.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig995.6.1 vs. uniprot
Match: A0A6H5J8S2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8S2_9PHAE) HSP 1 Score: 157 bits (397), Expect = 5.120e-44 Identity = 75/147 (51.02%), Postives = 100/147 (68.03%), Query Frame = 2
Query: 401 GPHASIHSDMAALTANVSGRTLRSWVRHFLRGSRFKIKVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTNPQLRVQDVHRWINTVLLKDFVTEDSPGVSLRTTHAWMQAVGFRWRRHQKCVYVDGHNRPDVVEHRQTYVQTM 841
G H HS++AAL V+G+ +R+WVR F+ G RFK++VR+Y+ R+L S I DED R RE+LD +IY RK+ PQLRV+D + +N LK ++ E + G L T H W+Q +GFRWRRH+KCVY DGHNRPD + R YV M
Sbjct: 18 GLHPIKHSEVAALPVGVTGKVVRAWVRDFVNGKRFKVRVRDYAARNLLSVINDEDFREESREWLDAKIYGRKEGEPQLRVRDFQKHLNDTALKPYMEEGARGNCLDTVHRWLQDLGFRWRRHRKCVYADGHNRPDNIRRRMGYVTEM 164
BLAST of mRNA_P-littoralis_Contig995.6.1 vs. uniprot
Match: A0A6H5KM05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM05_9PHAE) HSP 1 Score: 161 bits (407), Expect = 7.470e-43 Identity = 80/158 (50.63%), Postives = 102/158 (64.56%), Query Frame = 2
Query: 380 QPGRLEYGPHASIHSDMAALTANVSGRTLRSWVRHFLRGSRFKIKVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTNPQLRVQDVHRWINTVLLKDFVTEDSPGVSLRTTHAWMQAVGFRWRRHQKCVYVDGHNRPDVVEHRQTYVQTMLAVR 853
Q R++ G HS AA A V + +R WV+ F +G F + R+Y+KR HSFIEDED R R Y+D ++YRRKK P+LR+ DV +WIN LLKD + + GVS RT H WMQ +GFRW RH KCVYVDGHNRPD+V R+ +V +L R
Sbjct: 276 QKVRIQEGVAKMDHSRAAAEVAKVESKAVRRWVKEFCKGGAFVVPKRQYNKREPHSFIEDEDKRNHLRGYIDRKLYRRKKDEPRLRIADVQKWINEELLKDELA-GTKGVSRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDIVNDRRGFVAYLLGPR 432
BLAST of mRNA_P-littoralis_Contig995.6.1 vs. uniprot
Match: A0A6H5JJM4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM4_9PHAE) HSP 1 Score: 163 bits (412), Expect = 1.190e-41 Identity = 76/141 (53.90%), Postives = 101/141 (71.63%), Query Frame = 2
Query: 419 HSDMAALTANVSGRTLRSWVRHFLRGSRFKIKVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTNPQLRVQDVHRWINTVLLKDFVTEDSPGVSLRTTHAWMQAVGFRWRRHQKCVYVDGHNRPDVVEHRQTYVQTM 841
HS A A+V RT+R WV+ F +G F ++ R+Y+KR HS+I+DEDIR REY+D R+YRRKK P+LR+ DV +WIN LLK+ + + G+S RT H WMQ +GFRW RH KCVYVDGHNRPDVV R+++V+ +
Sbjct: 3 HSREAGKVADVDSRTVRRWVKEFCKGDSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELA-GTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVELL 142
BLAST of mRNA_P-littoralis_Contig995.6.1 vs. uniprot
Match: A0A6H5JDB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDB4_9PHAE) HSP 1 Score: 160 bits (406), Expect = 3.340e-41 Identity = 75/147 (51.02%), Postives = 102/147 (69.39%), Query Frame = 2
Query: 401 GPHASIHSDMAALTANVSGRTLRSWVRHFLRGSRFKIKVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTNPQLRVQDVHRWINTVLLKDFVTEDSPGVSLRTTHAWMQAVGFRWRRHQKCVYVDGHNRPDVVEHRQTYVQTM 841
G H HS++AAL V+G+ +R+WVR F+ G RFK++VR+Y+ R+L S I DED R RE+LD +IY RK+ PQLRV+D+ + +N LK ++ E + G+S T H W+Q +GFRWRRH+KCVY DGHNRPD + R YV M
Sbjct: 18 GLHPIKHSEVAALPVGVTGKVVRAWVRDFVNGKRFKVRVRDYAARNLLSVINDEDFREESREWLDAKIYGRKEGEPQLRVRDLQKHLNDTALKPYMEEGARGISFDTVHRWLQDLGFRWRRHRKCVYADGHNRPDNIRRRMGYVTEM 164
BLAST of mRNA_P-littoralis_Contig995.6.1 vs. uniprot
Match: A0A6H5K550_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K550_9PHAE) HSP 1 Score: 155 bits (391), Expect = 7.960e-39 Identity = 73/145 (50.34%), Postives = 98/145 (67.59%), Query Frame = 2
Query: 419 HSDMAALTANVSGRTLRSWVRHFLRGSRFKIKVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTNPQLRVQDVHRWINTVLLKDFVTEDSPGVSLRTTHAWMQAVGFRWRRHQKCVYVDGHNRPDVVEHRQTYVQTMLAVR 853
HS + V T+R WV+ F G F ++ R+Y+KR HS+I+DED+R REY+D R+YRRKK P+LR+ DV +WI+ LLK+ + + GVS RT H WMQ +GFRW RH KCVYVDGHNRPDVV R+++V + +R
Sbjct: 47 HSREVGEVSEVDPTTVRRWVKEFCNGGSFVVRKRQYNKREAHSYIDDEDVRYRLREYIDRRLYRRKKNEPRLRIADVQKWIHEDLLKEELA-GTRGVSWRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVALLKRLR 190
BLAST of mRNA_P-littoralis_Contig995.6.1 vs. uniprot
Match: A0A6H5JH07_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH07_9PHAE) HSP 1 Score: 152 bits (385), Expect = 4.570e-38 Identity = 71/137 (51.82%), Postives = 96/137 (70.07%), Query Frame = 2
Query: 443 ANVSGRTLRSWVRHFLRGSRFKIKVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTNPQLRVQDVHRWINTVLLKDFVTEDSPGVSLRTTHAWMQAVGFRWRRHQKCVYVDGHNRPDVVEHRQTYVQTMLAVR 853
+ V T+R WV+ F G F ++ R+Y+KR HS+I+DED+R REY+D R+YRRKK P+LR+ DV +WI+ LLK+ + + GVS RT H WMQ +GFRW RH KCVYVDGHNRPDVV R+++V + +R
Sbjct: 372 SEVDPTTVRRWVKEFCNGGSFVVRKRQYNKREAHSYIDDEDVRYRLREYIDRRLYRRKKDEPRLRIADVQKWIHEDLLKEELA-GTRGVSRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVALLKRLR 507
BLAST of mRNA_P-littoralis_Contig995.6.1 vs. uniprot
Match: A0A6H5K659_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K659_9PHAE) HSP 1 Score: 152 bits (385), Expect = 5.140e-38 Identity = 76/156 (48.72%), Postives = 94/156 (60.26%), Query Frame = 2
Query: 386 GRLEYGPHASIHSDMAALTANVSGRTLRSWVRHFLRGSRFKIKVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTNPQLRVQDVHRWINTVLLKDFVTEDSPGVSLRTTHAWMQAVGFRWRRHQKCVYVDGHNRPDVVEHRQTYVQTMLAVR 853
GR+ G HS V RT+R+WV F + F + REY KR +I+DEDIR REY+DERIYRRKK P+ RV D RW+NTV LK+ G+ T H W+ +GFRWRRH KCVYVDGHNRPDVV+ R+ Y + M +R
Sbjct: 14 GRINEGVKKLAHSRAVGKAVGVHARTVRNWVTDFCKDGNFVVPHREYVKRQPFCYIDDEDIREQCREYVDERIYRRKKGQPRFRVADFQRWVNTVCLKEEFAGGG-GICRSTAHVWIAQLGFRWRRHGKCVYVDGHNRPDVVQARRLYTEKMFVMR 168
BLAST of mRNA_P-littoralis_Contig995.6.1 vs. uniprot
Match: A0A6H5JJ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ42_9PHAE) HSP 1 Score: 150 bits (379), Expect = 3.540e-37 Identity = 75/154 (48.70%), Postives = 97/154 (62.99%), Query Frame = 2
Query: 392 LEYGPHASIHSDMAALTANVSGRTLRSWVRHFLRGSRFKIKVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTNPQLRVQDVHRWINTVLLKDFVTEDSPGVSLRTTHAWMQAVGFRWRRHQKCVYVDGHNRPDVVEHRQTYVQTMLAVR 853
+ YG +HS A V +T+R WV F + +F + R Y KR ++I+DEDIR REY+DERIYRRK T + RV D HRW+N V L++ +D G+S T H W+ +GFRWRRH KCVYVDGHNRPDVVE R+ Y + M +R
Sbjct: 432 IRYGVQKMVHSRAVGEGAGVHAKTVRRWVTEFCKDGKFVVPDRAYVKRQPFTYIDDEDIRDQCREYIDERIYRRKGT--RFRVADFHRWVNEVCLEEEF-KDGGGISRSTAHHWISQLGFRWRRHGKCVYVDGHNRPDVVEARRLYTEKMFVMR 582
BLAST of mRNA_P-littoralis_Contig995.6.1 vs. uniprot
Match: A0A6H5K527_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K527_9PHAE) HSP 1 Score: 149 bits (375), Expect = 1.140e-36 Identity = 74/154 (48.05%), Postives = 92/154 (59.74%), Query Frame = 2
Query: 392 LEYGPHASIHSDMAALTANVSGRTLRSWVRHFLRGSRFKIKVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTNPQLRVQDVHRWINTVLLKDFVTEDSPGVSLRTTHAWMQAVGFRWRRHQKCVYVDGHNRPDVVEHRQTYVQTMLAVR 853
+ G HS V RT+R WV F + +F + REY KR +I+DEDIR REY+DERIYRRKK P+ RV D RW+NTV LK+ G+ T H W+ +GFRWRRH KCVYVDGHNRPDVV+ R+ Y + M +R
Sbjct: 470 INEGVKKLAHSRAVGEAVGVHARTVRKWVTDFCKDGKFVVPHREYVKRQPFCYIDDEDIREQCREYVDERIYRRKKGQPRFRVADFQRWVNTVCLKEEFAGGG-GICRSTAHVWIAQLGFRWRRHGKCVYVDGHNRPDVVQARRLYTEKMFVMR 622
BLAST of mRNA_P-littoralis_Contig995.6.1 vs. uniprot
Match: A0A6H5L7Z5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Z5_9PHAE) HSP 1 Score: 137 bits (345), Expect = 2.320e-36 Identity = 73/159 (45.91%), Postives = 95/159 (59.75%), Query Frame = 2
Query: 392 LEYGPHASIHSDMAALTANVSGRTLRSWVRHFLRGSRFKIKVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTNPQLRVQDVHRWINTVLLKDFVTEDSPGVSLRTTHAWMQAVGFRWRRHQKCVYVDGHNRPDVVEHRQTYVQTMLAVRTSTAM 868
+E G + HS + +T+R WV+ F + +F I R Y R SFI+ EDI RE +D R+YRRKKT+P RV D RW+NTVLLK+ V G+S T H+W+ +GFRW++ KCVYVDGHNRPDV E R YV ML +R +M
Sbjct: 25 IEEGVNKMRHSRYVGDVVKTTAQTVRKWVKEFCQDGKFLISKRLYEIRQADSFIDPEDIAERCREEIDRRLYRRKKTDPWFRVSDFQRWVNTVLLKE-VFSGGGGISRTTAHSWICRLGFRWKKSGKCVYVDGHNRPDV-EARPEYVAKMLILRKMMSM 181 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig995.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig995.6.1 >prot_P-littoralis_Contig995.6.1 ID=prot_P-littoralis_Contig995.6.1|Name=mRNA_P-littoralis_Contig995.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=148bp MAALTANVSGRTLRSWVRHFLRGSRFKIKVREYSKRSLHSFIEDEDIRTMback to top mRNA from alignment at P-littoralis_Contig995:66692..68151- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig995.6.1 ID=mRNA_P-littoralis_Contig995.6.1|Name=mRNA_P-littoralis_Contig995.6.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1460bp|location=Sequence derived from alignment at P-littoralis_Contig995:66692..68151- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig995:66692..68151- >mRNA_P-littoralis_Contig995.6.1 ID=mRNA_P-littoralis_Contig995.6.1|Name=mRNA_P-littoralis_Contig995.6.1|organism=Pylaiella littoralis U1_48|type=CDS|length=444bp|location=Sequence derived from alignment at P-littoralis_Contig995:66692..68151- (Pylaiella littoralis U1_48)back to top |