mRNA_P-littoralis_Contig994.16.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig994.16.1
Unique NamemRNA_P-littoralis_Contig994.16.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig994.16.1 vs. uniprot
Match: Q8QKY0_ESV1K (EsV-1-142 n=2 Tax=root TaxID=1 RepID=Q8QKY0_ESV1K)

HSP 1 Score: 282 bits (721), Expect = 5.810e-89
Identity = 145/198 (73.23%), Postives = 159/198 (80.30%), Query Frame = 2
Query:  371 LKNSRGKTGDLLTHSAVLSENDHLLSYLLREKSLDPNLPNDAHAYPLHYAVLSGSLRMVTTLVNNSAFVDCTDNSKKPPLMIACDSEDHDIAEFLLDRGAFTMAQDASGYKPIHFAVKSRAQACLRRLLSVDAVVNAVNHMDETPLFVACRLGSHGVSRTLLRAGADADKKSKFGTTPSDEASAHDSSSLVDLLRRHV 964
            L+ SRG TGDLLTH AVLS+N+ LLSYLL EKS D NLPND HAYPLHYAVLSGSLRMVT LVNN AFVDCTD+ KK PLMIAC+ EDHDIAEFLLDRGA TM QDA G KPIHFAVKSRAQACLRRLLS +A VNAVNHMDETPLFVAC                  +K++KFGT+P DEAS++ SSSLV+LLRR+V
Sbjct:  248 LQYSRGNTGDLLTHQAVLSDNESLLSYLLNEKSFDTNLPNDVHAYPLHYAVLSGSLRMVTILVNNRAFVDCTDSFKKTPLMIACEEEDHDIAEFLLDRGASTMTQDACGNKPIHFAVKSRAQACLRRLLSSEAEVNAVNHMDETPLFVACXXXXXXXXXXXXXXXXXXEKRNKFGTSPLDEASSNGSSSLVELLRRYV 445          
BLAST of mRNA_P-littoralis_Contig994.16.1 vs. uniprot
Match: A0A0N5CBQ2_STREA (ANK_REP_REGION domain-containing protein n=2 Tax=Strongyloides TaxID=6247 RepID=A0A0N5CBQ2_STREA)

HSP 1 Score: 66.2 bits (160), Expect = 2.350e-8
Identity = 58/217 (26.73%), Postives = 92/217 (42.40%), Query Frame = 2
Query:  416 AVLSENDHLLSYLLREKSLDPNLPNDAHAYP-LHYAVLSGSLRMVTTLVNNSAFVDCTDNSKKPPLMIA------------CDSED-----------------------HDIAEFLLDRGAFTMAQDASGYKPIHFAVKSRAQACLRRLLSVDAVVNAVNHMDETPLFVACRLGSHGVSRTLLRAGADADKKSKFG-TTPSDEASAHDSSSLVDLLR 955
            AV+SEN+ ++S +L+   + P    D H Y  LH A  +G++ +  TL+     V   D +   PL IA            C S D                       H +   + D G   M  D      +H A      AC+++L+     +NA++  +ETPL VAC  G   V   L+++GA  +  S+   TTP   A A++ + L+  L+
Sbjct:  343 AVVSENERVVSKMLKTFDI-PRHGKDNHNYTALHLAAFTGNVSICKTLLQQGWVVTAEDKAGATPLHIAAGKGFTNIVQIFCTSNDDIIDKVDSNLRTALFYAALGGQAHTLNVMISDLGFDKMVVDVLDRTVLHAAAYCGFVACVQKLIDHGVGINAIDRDEETPLHVACCRGKEDVVHLLVKSGAIINPYSRINETTPLSYAIANNHTELIQFLK 558          
BLAST of mRNA_P-littoralis_Contig994.16.1 vs. uniprot
Match: UPI0015AF0B4D (ankyrin repeat and SOCS box protein 18 isoform X2 n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015AF0B4D)

HSP 1 Score: 65.5 bits (158), Expect = 3.430e-8
Identity = 46/140 (32.86%), Postives = 67/140 (47.86%), Query Frame = 2
Query:  506 PLHYAVLSGSLRMVTTLVNNSAFVDCTDNSKKPPLMIACDSEDHDIAEFLLDRGAFTMAQDASGYKPIHFAVKSRAQACLRRLLSVDAVVNAVNHMD-ETPLFVACRLGSHGVSRTLLRAGADADKKSKFGTTPSDEASA 922
            PL  A   G    +  L+ + A  + T   K   L  AC++++ D  E LL+RGA        GY P+H     ++  C + L+   A V+  +  + ETPL VA R G H  ++  LR GAD + +S  G TP   A A
Sbjct:  120 PLCIAAAQGYTECLRYLLEHGARPNLTAGGKTA-LHEACENDNTDCVELLLERGASAGLPSEDGYTPLHLCRTPQSLRCAKALVRHGARVDVASEDEGETPLHVAARHGLHHHAQLYLRYGADVNARSASGVTPLGAACA 258          
BLAST of mRNA_P-littoralis_Contig994.16.1 vs. uniprot
Match: UPI0015B0B60B (ankyrin repeat and SOCS box protein 18 isoform X1 n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015B0B60B)

HSP 1 Score: 65.5 bits (158), Expect = 3.450e-8
Identity = 46/140 (32.86%), Postives = 67/140 (47.86%), Query Frame = 2
Query:  506 PLHYAVLSGSLRMVTTLVNNSAFVDCTDNSKKPPLMIACDSEDHDIAEFLLDRGAFTMAQDASGYKPIHFAVKSRAQACLRRLLSVDAVVNAVNHMD-ETPLFVACRLGSHGVSRTLLRAGADADKKSKFGTTPSDEASA 922
            PL  A   G    +  L+ + A  + T   K   L  AC++++ D  E LL+RGA        GY P+H     ++  C + L+   A V+  +  + ETPL VA R G H  ++  LR GAD + +S  G TP   A A
Sbjct:  123 PLCIAAAQGYTECLRYLLEHGARPNLTAGGKTA-LHEACENDNTDCVELLLERGASAGLPSEDGYTPLHLCRTPQSLRCAKALVRHGARVDVASEDEGETPLHVAARHGLHHHAQLYLRYGADVNARSASGVTPLGAACA 261          
BLAST of mRNA_P-littoralis_Contig994.16.1 vs. uniprot
Match: A2QQK0_ASPNC (Aspergillus niger contig An08c0100, genomic contig n=20 Tax=Aspergillus TaxID=5052 RepID=A2QQK0_ASPNC)

HSP 1 Score: 61.2 bits (147), Expect = 2.860e-7
Identity = 56/207 (27.05%), Postives = 80/207 (38.65%), Query Frame = 2
Query:  410 HSAVLSENDHLLSYLLREKSLDPNLPNDAHAYPLHYAVLSGSLRMVTTLVNNSAF-VDCTDNSKKPPLMIAC---DSEDHDIAEFLLDRGAFTMAQDASGYKPIHFAVKSRAQACLRRLLSVDAVVNAVNHMDETPLFVACRLGS---------------------------HGVSR-------TLLRAGADADKKSKFGTTPSDEA 916
            H A       +   LL       N+ +D    P+H+AV    L +V  L++N  F  D  D S   PLMIA    ++E   I + LL +GA    +  SG   +HFA      + +R L++        +   + PL  A  +GS                           H VS        TLL+AGA+ADK+   G    D A
Sbjct:   12 HEAAREGKTQIAESLLSANPKLANVKDDDDRLPIHWAVAYNRLPIVELLISNKHFDPDVEDGSGWTPLMIASSLKNAEGDPIIDLLLKKGADVSTKSVSGQNALHFATSKANLSTVRTLIANKCSARVKDRRGQLPLHRAAAIGSSPIIKILLEEGKSPVNATDVDGLTALHHAVSEGHGDAAITLLKAGAEADKRDSNGVLAIDMA 218          
BLAST of mRNA_P-littoralis_Contig994.16.1 vs. uniprot
Match: D0NED6_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NED6_PHYIT)

HSP 1 Score: 62.0 bits (149), Expect = 5.250e-7
Identity = 46/174 (26.44%), Postives = 79/174 (45.40%), Query Frame = 2
Query:  359 RESDLKNSRGKTGDLLTHSAVLSENDHLLSYLLREKSLDPNLPN-DAHAYPLHYAVLSGSLRMVTTLVNNSAFVDCTDNSKKPPLMIACDSEDHDIAEFLLDRGAFTMAQDASGYKPIHF-AVKSRAQACLRRLLSVDAVVNAVNHMDETPLFVACRLGSHGVSRTLLRAGADA 874
            +E+   +   + G    H+A++     +   L+R      N    D    PLH AV++  + ++T L+   A +D  D   + PL+ AC      I   LL+ GA    Q+   + P+H+ +   R +  LR +++  A VNA +    TP+  A   G+   ++ LL  GA A
Sbjct:  181 KEATFSSIDEENGQSCLHTAIIKNFRKVTMALIRSGRAQVNAATRDGGWTPLHLAVITEEVDVMTELLTAGAMLDAVDADGQTPLLQACLGGKLKIVRLLLNAGANPAHQNKQAHSPLHYLSAFCRDRQLLRDIIANGADVNAKSMKLNTPMHFAAMNGNEVATQVLLEYGASA 354          
BLAST of mRNA_P-littoralis_Contig994.16.1 vs. uniprot
Match: A0A6G0X978_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X978_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 9.140e-7
Identity = 49/166 (29.52%), Postives = 76/166 (45.78%), Query Frame = 2
Query:  410 HSAVLSENDHLLSYLLREKSLDPNLPNDAHAYPLHYAVLSGSLRMVTTLVNNSAFVDCTDNSKKPPLMIACDSEDHDIAEFLLDRGAFTMAQD-ASGYKPIHFAVKSRAQACLRRLLSVDAVVNAVNHMDETPLFVACRLGSHGVSRTLLRAGADADKKSKFGTTP 904
            H+AV   +  L+SYLL + +LDPN+ N     PLH A++     +   LV     VD  D   + PL++ C     +    L+  GA    +  A+G  P+    +      +  LL   A VN V+H  ET L  A   G+  + + LL++GA     ++ G  P
Sbjct:  612 HAAVHGGHIELVSYLLDDLALDPNILNSHFESPLH-AMVVHIAEIAPLLVTRGGLVDAPDKGGQTPLLVQCRLGSKEGVITLVGLGANVQTKAWATGMTPLLECARLGHVGLVDFLLHRGAHVNDVSHDKETALHFAAASGNLELIKRLLQSGASTTLPNRDGLIP 776          
BLAST of mRNA_P-littoralis_Contig994.16.1 vs. uniprot
Match: A0A1U8QFV6_EMENI (Uncharacterized protein n=2 Tax=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) TaxID=227321 RepID=A0A1U8QFV6_EMENI)

HSP 1 Score: 57.8 bits (138), Expect = 4.300e-6
Identity = 60/207 (28.99%), Postives = 79/207 (38.16%), Query Frame = 2
Query:  410 HSAVLSENDHLLSYLLREKSLDPNLPNDAHAYPLHYAVLSGSLRMVTTLVNNSAF-VDCTDNSKKPPLMIAC---DSEDHDIAEFLLDRGAFTMAQDASGYKPIHFAVKS---------------------RAQACLRRLLSVDAV-------------VNAVNHMDETPLFVACRLGSHGVSRTLLRAGADADKKSKFGTTPSDEA 916
            H A       L   LL          +D    P+H+AV    L +V  LV+   F  D  D S   PLMIA    ++E   I E LL +GA   A+  +G   +HFA                        R Q  L R  ++ +              VNA ++   T L  A   G    + TLL+AGA+ADKK   GT   D A
Sbjct:   11 HEAAREGKLSLAESLLNANPKLATTKDDDDRLPIHWAVAYNHLPIVELLVSTKDFDPDVEDGSCWTPLMIAASLRNAEGDPIIELLLRKGADVNAKSITGQNALHFATSKANITTVRTLLENKCSARVKDKRGQLALHRAAAIGSTPIIQLLLKEGRSPVNATDNDGLTALHHAISEGHGDAALTLLKAGAEADKKDASGTLAIDMA 217          
BLAST of mRNA_P-littoralis_Contig994.16.1 vs. uniprot
Match: A0A2I2FT69_9EURO (Ankyrin n=1 Tax=Aspergillus steynii IBT 23096 TaxID=1392250 RepID=A0A2I2FT69_9EURO)

HSP 1 Score: 57.8 bits (138), Expect = 4.350e-6
Identity = 47/152 (30.92%), Postives = 67/152 (44.08%), Query Frame = 2
Query:  479 NLPNDAHAYPLHYAVLSGSLRMVTTLVNNSAF-VDCTDNSKKPPLMIAC---DSEDHDIAEFLLDRGAFTMAQDASGYKPIHFAVKSRAQACLRRLLSVDAVVNAVNHMDETPLFVACRLGSHGVSRTLLRAGADADKKSKFGTTPSDEASA 922
            N  +D    P+H+AV    L +V  LV++  F  D  D S   PLMIA    ++E   I E LL +GA   A+  SG   +HFA      + +R L+         +   + PL  A  +GS  +   LL+     D KS    T  D  +A
Sbjct:   35 NTKDDDERLPIHWAVAYNHLPIVELLVSSKNFDPDVEDGSGWTPLMIASSLKNAEGDAIIELLLRKGADVTAKSNSGQNALHFATSKANISTVRTLIENKCSARVKDKRGQLPLHRAAAIGSTAIINILLK-----DGKSPVNATDMDGMTA 181          
BLAST of mRNA_P-littoralis_Contig994.16.1 vs. uniprot
Match: Q0D1C3_ASPTN (Uncharacterized protein n=2 Tax=Aspergillus terreus TaxID=33178 RepID=Q0D1C3_ASPTN)

HSP 1 Score: 57.0 bits (136), Expect = 7.940e-6
Identity = 44/156 (28.21%), Postives = 66/156 (42.31%), Query Frame = 2
Query:  410 HSAVLSENDHLLSYLLREKSLDPNLPNDAHAYPLHYAVLSGSLRMVTTLVNNSAF-VDCTDNSKKPPLMIAC---DSEDHDIAEFLLDRGAFTMAQDASGYKPIHFAVKSRAQACLRRLLSVDAVVNAVNHMDETPLFVACRLGSHGVSRTLLRAG 865
            H A       L+  LL       N+ +D     +H+A     L +V  LV+   F  D  D S   PLMIA    ++E   I E LL +GA    + +SG   +HFA      + +R L++        +   + PL  A  +GS  + + LL  G
Sbjct:   12 HEAAREGKTQLVESLLSANPKLANVKDDDDRLAIHWAAAFNRLPVVELLVSTKNFDPDVEDGSGWTPLMIAASLKNAEGDAIIELLLRKGADVSVKSSSGQNALHFATSKGNLSTVRTLIANKCSARVKDRRGQLPLHRAAAIGSSPIIKVLLEEG 167          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig994.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
Q8QKY0_ESV1K5.810e-8973.23EsV-1-142 n=2 Tax=root TaxID=1 RepID=Q8QKY0_ESV1K[more]
A0A0N5CBQ2_STREA2.350e-826.73ANK_REP_REGION domain-containing protein n=2 Tax=S... [more]
UPI0015AF0B4D3.430e-832.86ankyrin repeat and SOCS box protein 18 isoform X2 ... [more]
UPI0015B0B60B3.450e-832.86ankyrin repeat and SOCS box protein 18 isoform X1 ... [more]
A2QQK0_ASPNC2.860e-727.05Aspergillus niger contig An08c0100, genomic contig... [more]
D0NED6_PHYIT5.250e-726.44Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
A0A6G0X978_9STRA9.140e-729.52Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1U8QFV6_EMENI4.300e-628.99Uncharacterized protein n=2 Tax=Emericella nidulan... [more]
A0A2I2FT69_9EURO4.350e-630.92Ankyrin n=1 Tax=Aspergillus steynii IBT 23096 TaxI... [more]
Q0D1C3_ASPTN7.940e-628.21Uncharacterized protein n=2 Tax=Aspergillus terreu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig994contigP-littoralis_Contig994:70813..71776 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LPG8
PFAMsLaminin_G_3,Pkinase_Tyr
Model size964
Max annot lvl2759|Eukaryota
KEGG koko:K10626
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.25e-07
EggNOG OGsCOG0515@1|root,KOG0192@2759|Eukaryota
EC2.3.2.27
Descriptionprotein kinase activity
Cds size603
COG categoryKLT
BRITEko00000,ko01000,ko04121
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791918.7295845-UTR-P-littoralis_Contig994:70812..708231680791918.7295845-UTR-P-littoralis_Contig994:70812..70823Pylaiella littoralis U1_48UTRP-littoralis_Contig994 70813..70823 +
1680791918.7616787-UTR-P-littoralis_Contig994:71426..717761680791918.7616787-UTR-P-littoralis_Contig994:71426..71776Pylaiella littoralis U1_48UTRP-littoralis_Contig994 71427..71776 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791918.7468908-CDS-P-littoralis_Contig994:70823..714261680791918.7468908-CDS-P-littoralis_Contig994:70823..71426Pylaiella littoralis U1_48CDSP-littoralis_Contig994 70824..71426 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig994.16.1prot_P-littoralis_Contig994.16.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig994 70824..71426 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig994.16.1

>prot_P-littoralis_Contig994.16.1 ID=prot_P-littoralis_Contig994.16.1|Name=mRNA_P-littoralis_Contig994.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=201bp
MRHLQERHDGSLQQELDRLRTLLPLHVSPARHEHVKQLPHVQISFPRRFP
RGDHGDRDPDEQDDDEYDGKTEERKIIITDDTFFHNGVDLRREMLEGIIH
SICTQGDLSEVRHLLDENLTSKTAGARPETCSHTAPSSPRTIISYRTCSA
RSRWTQTYPTTLTRTLCTTRSSPGLCGWLRPSSITARSSTARTTPRNPRS
*
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mRNA from alignment at P-littoralis_Contig994:70813..71776+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig994.16.1 ID=mRNA_P-littoralis_Contig994.16.1|Name=mRNA_P-littoralis_Contig994.16.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=964bp|location=Sequence derived from alignment at P-littoralis_Contig994:70813..71776+ (Pylaiella littoralis U1_48)
GACGTCGACGAATGCGCCATCTGCAAGAACGCCATGACGGATCACTGCAA CAAGAGCTCGACCGTCTGCGGACACTCCTTCCACTTCACGTGTCTCCTGC GAGGCATGAACACGTCAAACAACTGCCTCATGTGCAGATCTCCTTTCCGC GCCGGTTCCCGCGCGGAGACCACGGCGACCGCGACCCCGATGAACAGGAC GACGACGAGTACGACGGGAAAACGGAGGAGAGGAAAATCATCATCACCGA CGATACCTTCTTCCACAACGGCGTTGACCTCAGACGCGAGATGCTGGAGG GTATCATCCATTCCATCTGCACACAGGGAGACCTGTCGGAGGTGCGACAC CTCCTCGACGAGAATCTGACCTCAAAAACAGCAGGGGCAAGACCGGAGAC CTGCTCACACACAGCGCCGTCCTCTCCGAGAACGATCATCTCTTATCGTA CCTGCTCCGCGAGAAGTCGCTGGACCCAAACCTACCCAACGACGCTCACG CGTACCCTCTGCACTACGCGGTCCTCTCCGGGTCTCTGCGGATGGTTACG ACCCTCGTCAATAACAGCGCGTTCGTCGACTGCACGGACAACTCCAAGAA ACCCCCGCTCATGATCGCGTGCGACAGCGAAGACCACGACATCGCCGAGT TCTTGCTAGACAGGGGGGCGTTCACCATGGCACAGGACGCCTCCGGATAC AAGCCCATCCACTTCGCCGTCAAGTCTAGGGCGCAGGCGTGCCTCCGTCG ACTCCTCTCGGTCGACGCCGTCGTGAATGCCGTCAACCACATGGACGAAA CCCCGCTCTTCGTCGCGTGCAGGCTAGGCTCTCACGGAGTCTCGAGAACG CTGCTCCGCGCGGGGGCTGACGCGGACAAAAAGAGTAAATTCGGGACTAC CCCATCCGACGAGGCATCGGCGCACGATTCGTCGAGCCTAGTTGACCTGC TGCGGAGACATGTC
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Coding sequence (CDS) from alignment at P-littoralis_Contig994:70813..71776+

>mRNA_P-littoralis_Contig994.16.1 ID=mRNA_P-littoralis_Contig994.16.1|Name=mRNA_P-littoralis_Contig994.16.1|organism=Pylaiella littoralis U1_48|type=CDS|length=603bp|location=Sequence derived from alignment at P-littoralis_Contig994:70813..71776+ (Pylaiella littoralis U1_48)
ATGCGCCATCTGCAAGAACGCCATGACGGATCACTGCAACAAGAGCTCGA
CCGTCTGCGGACACTCCTTCCACTTCACGTGTCTCCTGCGAGGCATGAAC
ACGTCAAACAACTGCCTCATGTGCAGATCTCCTTTCCGCGCCGGTTCCCG
CGCGGAGACCACGGCGACCGCGACCCCGATGAACAGGACGACGACGAGTA
CGACGGGAAAACGGAGGAGAGGAAAATCATCATCACCGACGATACCTTCT
TCCACAACGGCGTTGACCTCAGACGCGAGATGCTGGAGGGTATCATCCAT
TCCATCTGCACACAGGGAGACCTGTCGGAGGTGCGACACCTCCTCGACGA
GAATCTGACCTCAAAAACAGCAGGGGCAAGACCGGAGACCTGCTCACACA
CAGCGCCGTCCTCTCCGAGAACGATCATCTCTTATCGTACCTGCTCCGCG
AGAAGTCGCTGGACCCAAACCTACCCAACGACGCTCACGCGTACCCTCTG
CACTACGCGGTCCTCTCCGGGTCTCTGCGGATGGTTACGACCCTCGTCAA
TAACAGCGCGTTCGTCGACTGCACGGACAACTCCAAGAAACCCCCGCTCA
TGA
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