mRNA_P-littoralis_Contig991.6.9 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig991.6.9 vs. uniprot
Match: A0A6H5KYW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYW8_9PHAE) HSP 1 Score: 809 bits (2090), Expect = 5.670e-270 Identity = 490/931 (52.63%), Postives = 610/931 (65.52%), Query Frame = 3
Query: 1044 GRGGKHVEETGELVNGSIIRRLSSTRRTKNWRAALEVLVSIEREAAAAAGAGRAESWRVWCRPGLSREDSDRARTIVYNIVMNVLSAQQ--RWQGVFALLENMQERGVTADIYTLNCVLKACGLAGKIKLMLNLLEEVRSISSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSSPPLLPRPDVVSFNTALAYCARAGEASLALDLLDEMRAANPTNEAAGFAPAQAREGGDGT-HLSPAPKPTIRSFNSALMACARGISSGYGDGFPRALEIVEAMRSGDGGAPPPTIVTYRELVHVCGRAGRWEEALTWVDAAVDEGVELDASFFAAIITAFGRGGEWQRALSVLYEDMRTHLVFPDKFCFNMALRACADAGQIKEALQILDENLSERRGANGFSYSSILEVLALQGNAELGLQLLREMGESRWLAPNAWHHGAVFLAHLKAGDEAGALAVQSEWRHKQV----PFTVSVFQGAEAYHTFT---------SGAVEPSAGELNAGGFGAGKE-------------AAATPEDRLQPSELLCLAAVHADSGAWPECLEVLDTAHEVSRSARAAVRAKANELLLGRTERGERIGNVGAAGKSGAGAGLASWREIAARDSEVTDRADEAAKALRACFEAAVEALGRAGRWEQALEVLTEGASVASRHGLALDPACFVHALRACSGGNGNIDSDSDTAGSDGGFEAGLALLYKMEAQAGVVPDAWCTNVLLEAAVDAEQWSLAFDLFDDLERRRLSASAHRDGGGGHNAGGADNGAVTQRPGSSGSREYMDNSTGEDSGAEASQRPGAAAAAAPGKKSLPRPYDRGLKEMRKTAIDAMAPTALTYRLALQACVGAASSGEVMGERALSLVQKMAADPRMGPAGESMALAKQVCTMSKEMATAIEIRRLETEAQDRHESNAFLQEYLQRRSARV 3749
G G + E+T +LVN +I + L+ RR +WR AL VL +E++AAA A S R WCR GLSR+D +RART VYNIVM++LS++ RWQ F LLE MQERGVT D+YTLN LKACG AG+++L+L LL E+RS S ++ LLP PDVVSFN A+ CARAGEASLA+ LLDEMRAA ++++ A + G+GT SP P P S+NS L AC R +++ + RAL+I+EAMR+G+ GA GRW++AL+WVDAAVD G+EL AS F AII AFGRGGEW+R+LSVLYEDM + V PDKFC+NMALRACADAGQ+KEAL ILD+NLS +RG N FSYSSI++ LA QG+AELGL+LLRE+ S +PNAWH+G VFL+ LKAGDE GALA+QSEWR Q T + GA+ + SG +P++ + A G AA P D QP +LLCLAA HAD+GAW ECL+VL TA EVSR+ARAAVRAKANELLLGRTERGE IGNVGA AGAGLASWR++AA++SE T+R DEA+KALR C+E+AVEALGRAGR +QAL+ EGASV +HGL++DPACFV ALR+C +DT D G EAG A L +MEA+AGVVPD+WCTNV++EAA+ EQWSLA LFD+ E+R +S H D G GA T +G+ + + SQRP A P S R +RG +E+RKTAID MAPTALTYRLALQAC+GAA S ++M ERAL LV+KM +DP MGP E+ LA+QVC S +MA A+EIR+LETEAQDRHE++ FL+++ +RRS R+
Sbjct: 158 GEGRRRGEQTSDLVNPAIAKLLTLPRRRNDWREALRVLDDVEQQAAARGEA----STRFWCRQGLSRDDGERARTRVYNIVMDILSSRNSSRWQEAFMLLETMQERGVTTDLYTLNSALKACGSAGQVELLLALLTEMRSSSRSNDDSGSNDNQRGD---------------GNAATILLPAPDVVSFNIAIGACARAGEASLAVSLLDEMRAAAVADDSSPTAGDRVWAVGEGTARASPVPPPDRLSYNSTLSACGRAVTTDDAEWVQRALDILEAMRTGEDGAXXXXXXXXXXXXXXXXXXGRWDQALSWVDAAVDAGLELTASVFCAIIIAFGRGGEWRRSLSVLYEDMPAYGVDPDKFCYNMALRACADAGQVKEALDILDQNLSGQRGVNAFSYSSIIDALARQGDAELGLRLLREIHVSTGYSPNAWHYGGVFLSFLKAGDETGALAIQSEWRDIQACNAREATERMRPGADRSFSANGDSSERRSRSGRTDPNSDKNGARSAKRGAAIQDPEGQRAVVELAAVAPGDHFQPLDLLCLAAFHADNGAWSECLDVLGTAQEVSRTARAAVRAKANELLLGRTERGEVIGNVGAT-TGFAGAGLASWRQVAAKNSEATERVDEASKALRGCYESAVEALGRAGRHKQALQA-KEGASVTVKHGLSMDPACFVPALRSC--------CCNDTDSEDSGSEAGAATLGEMEARAGVVPDSWCTNVVMEAAIRDEQWSLASRLFDEAEKRHMSG--HHDRG---------RGAGT---------------SGDIADGDKSQRP-----AGPPGASDTRSCNRGPRELRKTAIDTMAPTALTYRLALQACIGAAQSNDMMAERALELVRKMVSDPHMGPRREAFLLAQQVCAKSAKMAVAVEIRQLETEAQDRHENDDFLRQWRERRSYRL 1028
BLAST of mRNA_P-littoralis_Contig991.6.9 vs. uniprot
Match: D7G394_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G394_ECTSI) HSP 1 Score: 403 bits (1036), Expect = 5.010e-124 Identity = 238/404 (58.91%), Postives = 286/404 (70.79%), Query Frame = 3
Query: 2538 AAATPEDRLQPSELLCLAAVHADSGAWPECLEVLDTAHEVSRSARAAVRAKANELLLGRTERGERIGNVGAAGKSGAGAGLASWREIAARDSEVTDRADEAAKALRACFEAAVEALGRAGRWEQALEVLTEGASVASRHGLALDPACFVHALRACSGGNGNIDSDSDTAGSDGGFEAGLALLYKMEAQAGVVPDAWCTNVLLEAAVDAEQWSLAFDLFDDLERRRLSASAHRDGGGGHNAGGADNGAVTQRPGSSGSREYMDNSTGEDSGAEASQRPGAAAAAAPGKKSLPRPYDRGLKEMRKTAIDAMAPTALTYRLALQACVGAASSGEVMGERALSLVQKMAADPRMGPAGESMALAKQVCTMSKEMATAIEIRRLETEAQDRHESNAFLQEYLQRRSARV 3749
AAA P DR QP +LLCLAA HAD+GAW +CL+VL TA EVSR+ARAAVRAKANELLLGRTERGE +GNVGA AGAGLASWR++AA +SE T+RADEA+KALR C+E+AVEALGRAGR ++AL+VL EGASV +HGL++DPACFV ALR+C +DT D G EAG A+L +MEA+AGVVPD+WCTNV++EAAV E+WSLA LFD+ E+R +S R G G + AD G + G PGA+ A R YDRG +EMRKTAID MAPTALTYRLALQACVGAA S + M ERAL LV+KM +D MGP E+ LA+QVC S +MA A+EIRRLETEAQDRHE+ FL+++ +RRS R+
Sbjct: 55 AAAAPGDRFQPLDLLCLAAFHADNGAWSDCLDVLGTAQEVSRTARAAVRAKANELLLGRTERGEVVGNVGAT-TGVAGAGLASWRQVAAENSEATERADEASKALRGCYESAVEALGRAGRHKEALQVLEEGASVTVKHGLSMDPACFVSALRSC--------CCNDTDSEDSGSEAGAAMLGEMEARAGVVPDSWCTNVVMEAAVRDEEWSLASRLFDEAEKRHMSGHHDRGRGAGTSGDIADGGKSHRLAGP----------------------PGASDA---------RSYDRGRREMRKTAIDTMAPTALTYRLALQACVGAAPSEDKMAERALELVRKMVSDLHMGPRREAFLLAQQVCAKSAKMAVAVEIRRLETEAQDRHENEDFLRQWRERRSYRL 418
BLAST of mRNA_P-littoralis_Contig991.6.9 vs. uniprot
Match: D7G393_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G393_ECTSI) HSP 1 Score: 355 bits (912), Expect = 5.000e-106 Identity = 210/416 (50.48%), Postives = 262/416 (62.98%), Query Frame = 3
Query: 1044 GRGGKHVEETGELVNGSIIRRLSSTRRTKNWRAALEVLVSIEREAAAAAGAGRAESWRVWCRPGLSREDSDRARTIVYNIVMNVLSAQQ--RWQGVFALLENMQERGVTADIYTLNCVLKACGLAGKIKLMLNLLEEVRSISSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSSPPLLPRPDVVSFNTALAYCARAGEASLALDLLDEMRAANPTNEAAGFAPAQAREGGDGT--------HLSPAPKPTIRSFNSALMACARGISSGYGDGFPRALEIVEAMRSGDGGAPPPTIVTYRELVHVCGRAGRWEEALTWVDAAVDEGVELDASFFAAIITAFGRGGEWQRALSVLYEDMRTHLVFPDKFCFNMALRACADAGQIKEALQILDENLSERRGANGFSYSSILEVLALQ 2261
G G K E+T +LVN +I + L+ RR +WR AL VL +E++AAA G A S R+WCR GLSR+D +RART VYNIVM++LS+++ RWQ F LLE MQERGVT D+YTLN LKACG AG++KL+L LL E+RS S ++ LLP PDVVSFN A+ CARAGEASLA+ L DEMRAA A A + GDG SP P P S+NS L AC R +++ + RAL+I+EAMR+G+ GA GRW++AL+WVDAAVD G+EL AS F AII AFGRG EW+R+LSV+Y+DM + V PDKFC+NMALRACADAGQ+KEAL ILD++LS +RG N FSYSSI++ LA Q
Sbjct: 66 GEGRKRGEQTSDLVNPAIAKLLTLPRRRNDWREALRVLDDVEQQAAAR---GEASS-RLWCRQGLSRDDGERARTRVYNIVMDILSSRKSSRWQEAFLLLETMQERGVTTDLYTLNSTLKACGSAGQVKLLLALLREMRSSSRSNDDSGSNDNQRGD---------------GNAATFLLPAPDVVSFNIAIGACARAGEASLAVSLFDEMRAA---------AVADSPTAGDGVLAVGEGTARPSPVPSPDRLSYNSTLSACGRAVTADDAEWLQRALDILEAMRTGEDGAXXXXXXXXXXXXXXXXXXGRWDQALSWVDAAVDAGLELTASVFCAIIIAFGRGREWRRSLSVVYDDMPAYEVDPDKFCYNMALRACADAGQVKEALDILDQDLSGQRGVNAFSYSSIIDALARQ 453
BLAST of mRNA_P-littoralis_Contig991.6.9 vs. uniprot
Match: A0A7N0ZWD8_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0ZWD8_KALFE) HSP 1 Score: 60.1 bits (144), Expect = 2.770e-5 Identity = 42/177 (23.73%), Postives = 86/177 (48.59%), Query Frame = 3
Query: 1845 ALEIVEAMRSGDGGAPPPTIVTYRELVHVCGRAGRWEEALTWVDAAVDEGVELDASFFAAIITAFGRGGEWQRALSVLYEDMRTHLVFPDKFCFNMALRACADAGQIKEALQILDENLSERRGANGFSYSSILEVLALQGN-AELGLQLLREMGESRWLAPNAWHHGAVFLAHLKAG 2372
AL++ E +R P I Y +L+ + G+ + E+A A ++EG E ++ + A+++A+ R G++ +A S+L E + PD + +++ +++C A + +L + + R N +Y+++++ AE+ LL EM R P+ W + A +G
Sbjct: 132 ALQVFELLREQLWYKPSHGI--YIKLIVMLGKCKQPEKAQVLFQAMIEEGCEANSESYTALLSAYSRSGQFNKAFSILEEMKKAPGCHPDVYTYSILIKSCLHAFDFDKVQTLLSDMRTLRIKPNTITYNTLIDAYGKARRFAEMESTLL-EMLRMRDCEPDVWTMNSTLRAFGGSG 305 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig991.6.9 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig991.6.9 >prot_P-littoralis_Contig991.6.9 ID=prot_P-littoralis_Contig991.6.9|Name=mRNA_P-littoralis_Contig991.6.9|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1151bp MLRSSSVLTAPTLRSAGKTRRNCYPCLQHHLSSNSSSSSSRIYCGGRMAGback to top mRNA from alignment at P-littoralis_Contig991:28102..48973- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig991.6.9 ID=mRNA_P-littoralis_Contig991.6.9|Name=mRNA_P-littoralis_Contig991.6.9|organism=Pylaiella littoralis U1_48|type=mRNA|length=20872bp|location=Sequence derived from alignment at P-littoralis_Contig991:28102..48973- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig991:28102..48973- >mRNA_P-littoralis_Contig991.6.9 ID=mRNA_P-littoralis_Contig991.6.9|Name=mRNA_P-littoralis_Contig991.6.9|organism=Pylaiella littoralis U1_48|type=CDS|length=3453bp|location=Sequence derived from alignment at P-littoralis_Contig991:28102..48973- (Pylaiella littoralis U1_48)back to top |