mRNA_P-littoralis_Contig990.14.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig990.14.1
Unique NamemRNA_P-littoralis_Contig990.14.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig990.14.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 1.090e-91
Identity = 184/456 (40.35%), Postives = 242/456 (53.07%), Query Frame = 1
Query:   73 DGNPVGRRGARKVFGIDPMLVRDW---ETQEGELVAFSKKQSAGKQRSLHPGRESDTQKAEAAVVDEINTLRKNGAA-VTRDLVMAKLLAEMPTFAGGAPSADDPEKMENIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSR-------------------------------------KIFELLYNMDQTPIQAEMPSETTVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPF---------------------------RTSFGYPPAGISLGVQKSSWCDGTQSDDWVTQDFMRRPGS-SPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRNINKEFKRGFRAKYTIWIRDNFG--RSGKKVSAPSRGLVATWVKEVWAGISAQTILSCFKVCGLTLNLDGSED 1227
            DG PVG  GA KV  +    + +W   E Q  E V+ + K S  KQ  +H G +  T  AE      ++      A  +    VM KLL   P   GG P+   PE+  + +  +N+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KL                                        ++FE + NMDQ P+Q EMP ETT++KTGAK  RISTGG  EK R+T+VL V  DG+KV PRII++GTPF                           R   G+P  G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF CH +E F   L+  A T V+ + GGLTP+ QPLDR +NK+ KR  R KYT +        RSGK +  P RG+V+TW KE W  I+ +T+ +C K+CGLTL LDGSED
Sbjct:  113 DGQPVGNNGAAKVLQVPRKRIIEWLKPEAQLREKVSANPKLSKAKQ--VHSGGKVSTVDAEQPFPCGLHQRATQAAPRLGNREVMNKLLELKPDALGGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGK-LKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSED 565          
BLAST of mRNA_P-littoralis_Contig990.14.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 5.090e-90
Identity = 188/467 (40.26%), Postives = 246/467 (52.68%), Query Frame = 1
Query:   82 PVGRRGARKVFGIDPMLVR-------DWETQEGEL---VAFSKKQSAGKQRSLHPGRESDTQKAEAAVVDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGAPSADDPEKMENIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSR-------------------------------------KIFELLYNMDQTPIQAEMPSETTVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPF---------------------------RTSFGYPPAGISLGVQKSSWCDGTQSDDWVTQDF--------MRRPGS-SPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRNINKEFKRGFRAKYTIWIRDNFG--RSGKKVSAPSRGLVATWVKEVWAGISAQTILSCFKVCGLTLNLDGSED 1227
            P+ R GA    G  P+ ++       +W  QEG+L   V+ + K S  KQ  +H G ++ T  AE A+VD IN  RK         VM KLL   P   GG P+   PE+    +  +N+WY RF KR+ FSIRR+ SVGQK P+G+EG AWA + KLR                                       ++FE L NMDQTP+Q EMP ETT+E TG K  RISTGG+ EK R+T+VL V  DG+ V P II+KGTPF                           R   G+P  G+S GVQ+ SW    + + W+   +        M RP + S   QRP +LVLDDF CH++E F   L   A T V+ + GGLTP+ QPLDR +NK+ KR  R KYT +        RSGK +  P RG+V+TW KE W  ++++T+ +CFK+CGLTL LDGSED
Sbjct:   70 PIERSGAVGGKGSYPIRLQVPRKRIIEWLKQEGQLREKVSANPKLSKAKQ--VHSGGKASTVDAEQALVDYINEQRKLHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGK-EKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGK-LKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSED 532          
BLAST of mRNA_P-littoralis_Contig990.14.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 1.660e-89
Identity = 195/490 (39.80%), Postives = 253/490 (51.63%), Query Frame = 1
Query:    7 GRSAYENVQKLEVLKYSRSEC-ADGNPVGRRGARKVFGIDPMLVRDWETQEGEL---VAFSKKQSAGKQRSLHPGRESDTQKAEAAVVDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGAPSADDPEKMENIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSR-------------------------------------KIFELLYNMDQTPIQAEMPSETTVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPFRT----------------------SFGYPPAGISLGVQ------------------KSSWCDGTQSDDWVTQDFMRRPGS-SPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRNINKEFKRGFRAKYTIWIRDNFG--RSGKKVSAPSRGLVATWVKEVWAGISAQTILSCFKVCGLTLNLDGSE 1224
            G+ +Y    KL    Y+R  C  DG PVG  GA  V  +    + +W  QE +L   V+ + K S  KQ  +H G ++ T  AE A+VD +N  RK         VM KLL   P   GG  +   PE+    +  +N+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR                                       ++FE L NMDQTP+Q EMP ETT+EKTGAK  RISTGGE EK R+T+VL V  DG+KV PRII+KGTPF                        S     +G   G Q                  + SW D  + + W+   +  RP + S   QRP +LVLDDF CH++E F   L+  AKT V+ + GGLT + QPLDR +NK+ KR  R KYT          RSGK ++ P  G+V+TW KE W  I+++T+ +CFK+CGLTL LDGSE
Sbjct:   79 GKGSYPIRFKLNAATYTRKICPCDGQPVGNNGAAIVLQVPWKRIIEWLKQEEQLREKVSANPKLSKAKQ--VHSGGKASTVDAEQALVDYMNEQRKQHRDCGNREVMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGE-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSGK-LNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSE 563          
BLAST of mRNA_P-littoralis_Contig990.14.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 2.650e-89
Identity = 184/466 (39.48%), Postives = 243/466 (52.15%), Query Frame = 1
Query:   34 KLEVLKYSRSECADGNPVGRRGARKVFGIDPMLVRDWETQEGELVAFSK-KQSAGKQRSLHPGRESDTQKAEAAVVDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGAPSADDPEKMENIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSR-------------------------------------KIFELLYNMDQTPIQAEMPSETTVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPF---------------------------RTSFGYPPAGISLGVQKSSWCDGTQSDDWVTQDFMRRPG-SSPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRNINKEFKRGFRAKYTIWIRDNFG--RSGKKVSAPSRGLVATWVKEVWAGISAQTILSCFKVCGLTLNLDGSED 1227
            KL+ + ++R  C DG PVG  GA KV  +D   +  W  +E  +    K K    K +S+H G    T + E  + D IN  R+         VM KLL   P   GG  +A   E+    R  +  WY+RF +RH  SIRR+TSVGQK P G+EG A+A + KLR+                                      ++FE L NMDQTP+Q EMP ETT+EK GAK  RISTGG+ EK R+T+ L V  DG KV  RII+KG PF                           +T+FGYP +G+S GVQ+ SW D  +   W+++ +  RP   S   QR S+LVLDDF              +  T V+++ GGLTP+ QPLDR ++KE KR  R +YT ++       ++GK +  P RGLV+TW KE WA I+A+T+  CFKVCGLTL LDGSED
Sbjct:   80 KLKAVAFTRVLCEDGQPVGNSGAAKVLAVDRRRIITWVGEEATMKNLVKEKPKLSKAKSIHAGVAPPTAEVEQDLEDYINEQRREHRGCGSMEVMNKLLELKPDALGGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGK-EKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDF--------------RTNTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGK-LQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSED 529          
BLAST of mRNA_P-littoralis_Contig990.14.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 277 bits (708), Expect = 1.980e-85
Identity = 161/372 (43.28%), Postives = 207/372 (55.65%), Query Frame = 1
Query:  313 MAKLLAEMPTFAGGAPSADDPEKMENIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSR-------------------------------------KIFELLYNMDQTPIQAEMPSETTVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPF---------------------------RTSFGYPPAGISLGVQKSSWCDGTQSDDWVTQDFMRRPGS-SPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRNINKEFKRGFRAKYTIWIRDNFG--RSGKKVSAPSRGLVATWVKEVWAGISAQTILSCFKVCGLTLNLDGSED 1227
            M KLL   P   GG P+   PE+    +  +N+WY RF KR+ FSIRR+TSVGQK P+G EG AWA + KLR                                       ++FE L NMDQTP+Q E+P ETT+EKTGAK  RISTGG+ EK R+T+VL V  DG+KV PRII+KGTPF                           R   G+P  G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF CH++E F   L+  A T V+ + G LTP+ QPLDR +NK+ KR  R KYT +        RSGK +  P RG+V+TW KE W   + +T+ +CF +CGLTL LDGSED
Sbjct:    1 MNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGK-LKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSED 370          
BLAST of mRNA_P-littoralis_Contig990.14.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 6.630e-84
Identity = 180/462 (38.96%), Postives = 238/462 (51.52%), Query Frame = 1
Query:   34 KLEVLKYSRSECADGNPVGRRGARKVFGIDPMLVRDWETQEGELVA-FSKKQSAGKQRSLHPGRESDTQKAEAAVVDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGAPSADDPEKMENIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSR-------------------------------------KIFELLYNMDQTPIQAEMPSETTVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPF---------------------------RTSFGYPPAGISLGVQKSSWCDGTQSDDWVTQDFMRRP--GSSPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRNINKEFKRGFRAKYTIWI----RDNFGRSGKKVSAPSRGLVATWVKEVWAGISAQTILSCFKVCGLTL 1206
            KL+V+ ++R  C DG P G  GA KV  +    + +W   E  L A  S      K + +H   ++     E A+V+ IN  RK+         M KLL   P   GG  +   PE+   +   + +WY RF KR++FSIRR+TSVGQK P+G EG AWA + KLR                                       ++FE L NMDQTP+Q EMP ETT+E TGAK  RI+TGG+ EK R+T+ L V  DG+KV  RII+KGTPF                           R+  G P  G+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF CH+++ F   L+ +A T V+ + GGL P+ QPLDR +NK+ KR  R  YT       RD   ++GK V  P RG VATW K  WA I+ + + +CFK+CGLTL
Sbjct:   61 KLKVVAFTRVVCEDGKPGGNSGAAKVLDVPRRRIVEWVRDEESLRAKVSANPKLSKAKQIHARGKASRADIEEALVEFINDQRKHHVGCGSMAAMNKLLELKPDALGGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGK-EKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDP--KTGKLVP-PGRGAVATWCKNAWASITPEIVKTCFKICGLTL 517          
BLAST of mRNA_P-littoralis_Contig990.14.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 1.220e-80
Identity = 161/401 (40.15%), Postives = 208/401 (51.87%), Query Frame = 1
Query:  313 MAKLLAEMPTFAGGAPSADDPEKMENIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSR-------------------------------------KIFELLYNMDQTPIQAEMPSETTVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPF---------------------------RTSFGYPPAGISLGVQKSSWCDGTQSDDWVTQDFMRRPGS-SPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRNINKEFKRGFRAKYTIWIRDNFG--RSGKKVSAPSRGLVATWVKEVWAGISAQTILS-----------------------------CFKVCGLTLNLDGSED 1227
            M KLL   P   GG  +   P +    +   N+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR                                       ++F+ L NMDQTP+Q EMP ETT+EKTGAK  RISTGG+ EK R+T+VL V  DG+KV PRII+KGTPF                           R    +P  G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF CH++E +   L+  A T V+++ GGLTP+ QPLDR +NK+ KR  R KYT +        RSGK +  P RG+V+TW KE W  I+ +T+ S                             CFK+CGLTL LDGSED
Sbjct:    1 MNKLLELKPNALGGMSANAKPTEALAFKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGK-LKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSED 399          
BLAST of mRNA_P-littoralis_Contig990.14.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 1.670e-80
Identity = 174/458 (37.99%), Postives = 227/458 (49.56%), Query Frame = 1
Query:  133 VRDWETQEGELVAFSKKQSAGKQRSLHPGRESDTQKAEAAVVDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGAPSADDPEKMENIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSR-------------------------------------KIFELLYNMDQTPIQAEMPSETTVEKTGAKHVRISTGGEA-------------------------EKLRYTVVLTVRGDGQKVLPRIIYKGTPF---------------------------RTSFGYPPAGISLGVQKSSWCDGTQSDDWVTQDFMRRP--GSSPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRNINKEFKRGFRAKYTIWIRDNFGRSGK--KVSAPSRGLVATWVKEVWAGISAQTILSCFKVCGLTLNLDGSED 1227
            VRD E+    + A  K     K + +H G ++ T   E A+V+ IN  RK+        VM KLL   P   GG  +   PE+    +  + +WY RF KR++FSIRR+TSVG + P+G EG AWA + KLR                                       ++F+ L NMDQTP+Q EMP ETT+EKTGAK  RI+TG                            EK R+T+ L V  DG KV  RII+KGTPF                           R+  G P  G+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF CH+++ F   L+ +A T V+ + GGLTP+ QPLDR +NK+ KR  R  YT        R  K  K++ P RG VATW K  WA I+ +T+ +CFK+CGLTL LDGSED
Sbjct:   31 VRDEESLRANVSANPK---LSKAKQIHAGGKASTADIEEALVEFINDQRKHHVGCGSMAVMNKLLELKPDTLGGLTAKPKPEEALAFKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTA-KAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSED 483          
BLAST of mRNA_P-littoralis_Contig990.14.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 1.100e-73
Identity = 182/514 (35.41%), Postives = 234/514 (45.53%), Query Frame = 1
Query:   34 KLEVLKYSRSECADGNPVGRRGARKVFGIDPMLVRDWETQEGELVAFSK-KQSAGKQRSLHPGRESDTQKAEAAVVDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGAPSADDPEKMENIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSR-------------------------------------KIFELLYNMDQTPIQAEMPSETTVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPF---------------------------RTSFGYPPAGISLGVQKSSWCDGTQSDDWVTQDFMRRPG-SSPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRNINKEFKRGFRAKY------------------------------------------------TIWIRDNFG--RSGKKVSAPSRGLVATWVKEVWAGISAQTILSCFKVCGLTLNLDGSED 1227
            KL   +++R  C DG PVG  GA KV G+D   V  W  +E  +    K K    K +S+H G    T + E  + D IN              +A    E+  F                R  +  WY+ F +RH FSIRR+TSVGQK P G+EG A+A + KLR+                                      K+FE L NMDQTP+Q EMP ETT+EK G K  RISTGG+ EK R+T  L V  DG KV  RII+KG PF                           RT FGYP +G+   VQ+ SWCD  +   W+++ +  RP   S   QR S+LVLDDF CHR E F + L+ +  T V+++ GGLTP+ QPLDR +NKE KR  R                                                   T ++       ++GK +  P RGLV+T  KE WA I+ +T+  CFKVCGLTL LDGSED
Sbjct:    4 KLTAAEFTRVLCEDGQPVGNSGAAKVLGVDRRRVITWIGEEATMKKLVKEKPKLSKAKSIHVGMAPTTAEVEQDLEDCINEQ------------LAASAGEILAF----------------RTKFKNWYHCFRERHGFSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGK-EKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQYMASAIADPKTGK-LQPPGRGLVSTRYKESWAAITPETVKMCFKVCGLTLALDGSED 487          
BLAST of mRNA_P-littoralis_Contig990.14.1 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 1.770e-69
Identity = 160/467 (34.26%), Postives = 217/467 (46.47%), Query Frame = 1
Query:   34 KLEVLKYSRSECADGNPVGRRGARKVFGIDPMLVRDWETQEGELVA-FSKKQSAGKQRSLHPGRESDTQKAEAAVVDEINTLRKNGAAVTRDLVMAKLLAEMPTFAGGAPSADDPEKMENIRRLYNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSR-------------------------------------KIFELLYNMDQTPIQAEMPSETTVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPF---------------------------RTSFGYPPAGISLGVQKSSWCDGTQSDDWVTQDFMRRP--GSSPRDQRPSVLVLDDFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRNINKEFKR--GFRAKYTIWIRDNFGRSGKKVSAPSRGLVATWVKEVWAGISAQTILSCFKVCGLTLNLDGSED 1227
            KL+ + ++R  C DG PVG  GA KV  +    + +W   E  L A  S      K + +H G ++ T   E A+V+ IN  RK+       L                            +  + +WY RF KR++F+IRR+TSVGQK P+G EG AWA + KLR                                       ++FE L NMDQTP+Q E  +                 G  EK R+T+ L V  DG+KV  RII+KGTPF                           R+  G P  G+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF CH+++ F   L+ +A T V+ + GGLTP+ Q LDR +NK+ KR                 ++GK ++ P RG VATW K  WA I+ +T+ +CFK+CGLTL LDGSED
Sbjct:   74 KLKAVAFTRVVCEDGKPVGNSGAAKVLDVPRRRIVEWVRDEESLRANVSANPKLSKAKQIHAGGKASTADIEEALVEFINDQRKHHVGCEEALA--------------------------FKSKFKSWYQRFRKRNKFNIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHERDA-----------------GGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGK-LAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSED 495          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig990.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHT8_9PHAE1.090e-9140.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE5.090e-9040.26DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ8_9PHAE1.660e-8939.80DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE2.650e-8939.48DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE1.980e-8543.28DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE6.630e-8438.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUK2_9PHAE1.220e-8040.15DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE1.670e-8037.99DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K583_9PHAE1.100e-7335.41Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KEE8_9PHAE1.770e-6934.26DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig990contigP-littoralis_Contig990:31341..33269 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog7668.SPU_015022-tr
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size1227
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.06e-46
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota,38I47@33154|Opisthokonta,3BMCH@33208|Metazoa,3CYY1@33213|Bilateria
Descriptionpogo transposable element with KRAB domain
Cds size1227
COG categoryBD
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791915.3590488-CDS-P-littoralis_Contig990:31340..318711680791915.3590488-CDS-P-littoralis_Contig990:31340..31871Pylaiella littoralis U1_48CDSP-littoralis_Contig990 31341..31871 +
1680791915.3734274-CDS-P-littoralis_Contig990:32000..321231680791915.3734274-CDS-P-littoralis_Contig990:32000..32123Pylaiella littoralis U1_48CDSP-littoralis_Contig990 32001..32123 +
1680791915.386595-CDS-P-littoralis_Contig990:32618..327051680791915.386595-CDS-P-littoralis_Contig990:32618..32705Pylaiella littoralis U1_48CDSP-littoralis_Contig990 32619..32705 +
1680791915.400583-CDS-P-littoralis_Contig990:32783..332691680791915.400583-CDS-P-littoralis_Contig990:32783..33269Pylaiella littoralis U1_48CDSP-littoralis_Contig990 32784..33269 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig990.14.1prot_P-littoralis_Contig990.14.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig990 31341..33269 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig990.14.1

>prot_P-littoralis_Contig990.14.1 ID=prot_P-littoralis_Contig990.14.1|Name=mRNA_P-littoralis_Contig990.14.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=409bp
KSGRSAYENVQKLEVLKYSRSECADGNPVGRRGARKVFGIDPMLVRDWET
QEGELVAFSKKQSAGKQRSLHPGRESDTQKAEAAVVDEINTLRKNGAAVT
RDLVMAKLLAEMPTFAGGAPSADDPEKMENIRRLYNAWYYRFLKRHRFSI
RRKTSVGQKKPEGWEGKAWAFIQKLRSRKIFELLYNMDQTPIQAEMPSET
TVEKTGAKHVRISTGGEAEKLRYTVVLTVRGDGQKVLPRIIYKGTPFRTS
FGYPPAGISLGVQKSSWCDGTQSDDWVTQDFMRRPGSSPRDQRPSVLVLD
DFSCHREEKFQQKLQSKAKTQVVMLGGGLTPVCQPLDRNINKEFKRGFRA
KYTIWIRDNFGRSGKKVSAPSRGLVATWVKEVWAGISAQTILSCFKVCGL
TLNLDGSED
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mRNA from alignment at P-littoralis_Contig990:31341..33269+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig990.14.1 ID=mRNA_P-littoralis_Contig990.14.1|Name=mRNA_P-littoralis_Contig990.14.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1929bp|location=Sequence derived from alignment at P-littoralis_Contig990:31341..33269+ (Pylaiella littoralis U1_48)
AAGAGCGGGCGCAGCGCATACGAGAACGTGCAGAAGCTGGAGGTGCTGAA GTACAGCCGGAGCGAGTGTGCCGATGGGAACCCAGTCGGAAGGCGTGGTG CTAGGAAGGTGTTCGGCATCGACCCGATGCTCGTCCGGGATTGGGAGACC CAGGAGGGGGAGCTTGTGGCGTTTTCCAAGAAGCAGAGCGCAGGCAAGCA GCGGTCGTTGCACCCTGGGCGCGAGTCTGACACACAGAAGGCGGAGGCGG CGGTGGTGGACGAGATCAACACCCTCAGGAAGAACGGTGCTGCTGTGACC CGGGACCTTGTCATGGCCAAGCTACTCGCCGAGATGCCAACCTTTGCAGG GGGCGCGCCGTCCGCAGACGATCCCGAGAAGATGGAAAACATTCGGAGGC TTTACAACGCCTGGTACTACAGGTTCCTCAAGCGGCACCGGTTCTCGATC CGACGCAAGACAAGCGTGGGGCAGAAGAAACCGGAAGGATGGGAGGGCAA GGCGTGGGCGTTCATCCAGAAGCTTCGCTCGGTGCTAGTTCGGCACGCGG AGGAAGCCGTTATCGTGGAGAGGGCAGCCCAGGCAGCGAAGAACGGAGGG ACCGTTGAGATCGAGATCGAAGGCAGCCCGCCGACTGCGGAGGAACTTCT GGCTGTTCAGCGCAAGATCTTCGAGCTGCTCTACAACATGGACCAGACCC CGATCCAGGCTGAAATGCCTTCGGAGACCACGGTGGAGAAGACTGGTGCG AAGCACGTTCGTATCTCGACAGGCGGTGAGGCGGTGTGCTGTGTTGAGTT CAAACCCAAGACGGTTGAGATTTTGATATTTCTCTGGCAAATATCAAATA TGCCGACAGTGGAAATACGGGGAATTAGGATTTTGTGCATGGCTTCTGCC GTCACGCTCGTCATCGTTCCGCGCACACCCGTTTTGCGTTCTTCTTTTTA CCTATGTACAGGTGCTGCGGTAAAGAGCATCGATCCTACACTTTTTCTGA TTGTGTCTCGTTCGTTTATCCGACTTGCGCTTTGTTTTCTTTTATCAGCG ATTTATATAGTTAATTATGTACTTCGAAGTATACGCTTACCGGTACCTAC GGATACCTATTTATATGTGTGGTGTTTTTTTATTATATTTTTAATGTGTT TTTTGCTGCAGTGAAAATGTACCTTACCGGTATGTTGTTCCTCTCGTTAT TTTATTAACGGGGTATTATTTTTTTAACTCAATTTTCGTTGTTTACATGC CTAAATCACTATTTTCACACCAGGCAAGGAGAAGCTGCGGTACACCGTTG TGCTAACCGTCAGGGGTGATGGGCAGAAGGTGCTGCCGCGCATCATCTAC AAGGGGACCCCTTTCGTCGGGGGTACCAACAAGTCGGGCTCGTCCAAGAA GCCAAGCAAGAACAGCCTGTCGTACGAGCACCTCCCAGACAAGCGGACGT CCTTCGGCTACCCTCCTGCCGGCATCAGCCTCGGGGTGCAGAAGTCGTCG TGGTGCGACGGCACTCAGTCGGACGACTGGGTAACCCAGGACTTCATGCG CCGACCAGGTTCTAGCCCCCGAGACCAGCGTCCCAGCGTTCTCGTGCTCG ACGACTTCAGTTGCCACCGGGAAGAGAAGTTCCAACAGAAGCTGCAGAGT AAGGCGAAGACGCAGGTGGTGATGCTTGGTGGAGGGCTGACCCCGGTGTG CCAGCCGCTCGACCGGAACATCAACAAGGAGTTCAAGCGAGGCTTTCGGG CCAAGTACACCATCTGGATCCGGGACAACTTCGGGCGCTCGGGGAAGAAG GTGTCCGCGCCGAGCAGGGGGCTGGTCGCGACGTGGGTAAAGGAGGTGTG GGCCGGCATCTCGGCGCAGACCATCCTTTCGTGCTTCAAGGTCTGCGGTC TCACCCTCAACCTCGACGGCAGCGAGGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig990:31341..33269+

>mRNA_P-littoralis_Contig990.14.1 ID=mRNA_P-littoralis_Contig990.14.1|Name=mRNA_P-littoralis_Contig990.14.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1227bp|location=Sequence derived from alignment at P-littoralis_Contig990:31341..33269+ (Pylaiella littoralis U1_48)
AAGAGCGGGCGCAGCGCATACGAGAACGTGCAGAAGCTGGAGGTGCTGAA
GTACAGCCGGAGCGAGTGTGCCGATGGGAACCCAGTCGGAAGGCGTGGTG
CTAGGAAGGTGTTCGGCATCGACCCGATGCTCGTCCGGGATTGGGAGACC
CAGGAGGGGGAGCTTGTGGCGTTTTCCAAGAAGCAGAGCGCAGGCAAGCA
GCGGTCGTTGCACCCTGGGCGCGAGTCTGACACACAGAAGGCGGAGGCGG
CGGTGGTGGACGAGATCAACACCCTCAGGAAGAACGGTGCTGCTGTGACC
CGGGACCTTGTCATGGCCAAGCTACTCGCCGAGATGCCAACCTTTGCAGG
GGGCGCGCCGTCCGCAGACGATCCCGAGAAGATGGAAAACATTCGGAGGC
TTTACAACGCCTGGTACTACAGGTTCCTCAAGCGGCACCGGTTCTCGATC
CGACGCAAGACAAGCGTGGGGCAGAAGAAACCGGAAGGATGGGAGGGCAA
GGCGTGGGCGTTCATCCAGAAGCTTCGCTCGCGCAAGATCTTCGAGCTGC
TCTACAACATGGACCAGACCCCGATCCAGGCTGAAATGCCTTCGGAGACC
ACGGTGGAGAAGACTGGTGCGAAGCACGTTCGTATCTCGACAGGCGGTGA
GGCGGAGAAGCTGCGGTACACCGTTGTGCTAACCGTCAGGGGTGATGGGC
AGAAGGTGCTGCCGCGCATCATCTACAAGGGGACCCCTTTCCGGACGTCC
TTCGGCTACCCTCCTGCCGGCATCAGCCTCGGGGTGCAGAAGTCGTCGTG
GTGCGACGGCACTCAGTCGGACGACTGGGTAACCCAGGACTTCATGCGCC
GACCAGGTTCTAGCCCCCGAGACCAGCGTCCCAGCGTTCTCGTGCTCGAC
GACTTCAGTTGCCACCGGGAAGAGAAGTTCCAACAGAAGCTGCAGAGTAA
GGCGAAGACGCAGGTGGTGATGCTTGGTGGAGGGCTGACCCCGGTGTGCC
AGCCGCTCGACCGGAACATCAACAAGGAGTTCAAGCGAGGCTTTCGGGCC
AAGTACACCATCTGGATCCGGGACAACTTCGGGCGCTCGGGGAAGAAGGT
GTCCGCGCCGAGCAGGGGGCTGGTCGCGACGTGGGTAAAGGAGGTGTGGG
CCGGCATCTCGGCGCAGACCATCCTTTCGTGCTTCAAGGTCTGCGGTCTC
ACCCTCAACCTCGACGGCAGCGAGGAC
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