mRNA_P-littoralis_Contig99.75.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig99.75.3 vs. uniprot
Match: D8LIK9_ECTSI (Beta strand repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK9_ECTSI) HSP 1 Score: 585 bits (1508), Expect = 1.150e-173 Identity = 341/617 (55.27%), Postives = 404/617 (65.48%), Query Frame = 1
Query: 1024 ASNTQQEQAQAAVETDPGTVSSRSPSATLGLLMIFQIQFLSSLRLLEANISAPFMKMLEKLKWLNLHFDVHI--FPSCDEEDNELAGGGDDNGTWTFNTFAVFGFLAFLTVCHIVLLSYMEASWLSQANAIHEHRLERSRARSSRQVSMPPAVVKAHAKFLDNSNADRDLDDQEKRATERFLRRHNSAFMYFPHLELVFLLFAYQGASTAEARMIQSGCLPLVLMGFIAL-----FVFPIFMIFYVGRIVWSRIKPQEGPVTFEADLSAYERRPAGESGGGAHVQNSCLCIRPCSKKTTTVYPKRRDQLRRACWCINFCRGFRDGWKYGHSVFEWADKGAWKCRADEQVDFEGRKFRIGFEPLYVDFTEEGAVYITFLLFKWFALGIISGLVTNGTVQTSSLALIYIADIVLLCVLRPFSNSVVQWVETVLVTADAMTLVLMVWASVLDPAVGGKGKKSIDTIYAFCMLIQTLGIILLTIPIYADTFVVLMFQIRTKAAKLWRGERSVTPIKDPEAKQIKGSWGDTCSIFCILMRENFVGCAKVSVYGPSSKDRATRSAVHEKAEAGSRRLSSIAEE-KYDVDATSGFLMRKNVRSTQLPVVRHGQSSSGDIESGAL 2850
A++T QE A AV TDPGTVSSRSPSATLGLLMIFQIQFLSSLRLLEANI+APF +ML++LKWLNLHFDV F CD+ED+ DDNG W FNTFAVFGF+A L +CHI+LLSY+EASWLSQA + +PP A L S R DQ++ L A GA A LP V G + F+FPIF++FYVGRIVWSR+KPQEGPVTF L+ E R + CWC++ CRGFRDGW+ GHS+FEWADKGAW DE+VD E RKFRIGFEPL+VDFT+EGAVYI FLLFKWFALGII+GLVTNGTVQT+SLA+IY+ DI LLC LRPFSNSVVQWVETVLVTADA+TL +MVWASVLDP + K+ +D IYA CMLIQTLGI LLTIPIYADTF+V+ FQIR KA+KLWRGER TP + + IKGSWG++C IFC+L+RENF+GC K SV+GP K R++ + A S RL I EE K D +A G + RK VR+++ P+V+HG+ SGD+E+GAL
Sbjct: 987 ATSTAQETATDAVSTDPGTVSSRSPSATLGLLMIFQIQFLSSLRLLEANITAPFRRMLDQLKWLNLHFDVDFVGFAGCDDEDS-FTWTEDDNGMWAFNTFAVFGFMALLILCHILLLSYIEASWLSQAQLGVD--------------ILPPRGAGFPALRLPGSVNLRGSHDQQR-------------------------LLASGGAGGVCA------VLPSVRHGLVRRMVRRKFIFPIFLMFYVGRIVWSRVKPQEGPVTFTKGLAPEEGR-------------------------------------KRCWCVSLCRGFRDGWRNGHSIFEWADKGAWVSLKDEKVDLESRKFRIGFEPLFVDFTKEGAVYIIFLLFKWFALGIIAGLVTNGTVQTASLAVIYLVDIALLCKLRPFSNSVVQWVETVLVTADALTLGMMVWASVLDPDMDAD-KRKLDGIYAGCMLIQTLGIFLLTIPIYADTFIVIFFQIRHKASKLWRGER--TPRE--QKSDIKGSWGESCGIFCVLVRENFIGCVKESVHGPRRKPRSSFTL------AVSDRLPGIKEEEKRDPEAAEGIIGRKPVRTSKFPIVKHGRGGSGDVETGAL 1509
BLAST of mRNA_P-littoralis_Contig99.75.3 vs. uniprot
Match: D7G3P1_ECTSI (Similar to Mucin-1 (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P1_ECTSI) HSP 1 Score: 490 bits (1262), Expect = 5.340e-144 Identity = 262/531 (49.34%), Postives = 346/531 (65.16%), Query Frame = 1
Query: 1069 DPGTVSSRSPSATLGLLMIFQIQFLSSLRLLEANISAPFMKMLEKLKWLNLHFDVHI-FPSCDEEDNELAGGGDDNGTWTFNTFAVFGFLAFLTVCHIVLLSYMEASWLSQANAIHEHRLERSRARSSRQVSMP--PAVVKAHAKFLDNSNADRDLDDQEKRATERFLRRHNSAFMYFPHLELVFLLFAYQGASTAEARMIQSGCLPLVLMGFIALFVFPIFMIFYVGRIVWSRIKPQEGPVTFEADLSAYERRPAGESGGGAHVQNSCLCIRPCSKKTTTVYPKRRDQLRRACWCINFCRGFRDGWKYGHSVFEWADKGAWKCRADEQVDFEGRKFRIGFEPLYVDFTEEGAVYITFLLFKWFALGIISGLVTNGTVQTSSLALIYIADIVLLCVLRPFSNSVVQWVETVLVTADAMTLVLMVWASVLDPAVGGKGKKSIDTIYAFCMLIQTLGIILLTIPIYADTFVVLMFQIRTKAAKLWRGERSVTPIKDPEAKQIKGSWGDTCSIFCILMRENFVGCAKVSVYGPS 2652
DP +VS+RSP ATLGLLM+FQ+QF+S LR++EANI+ PFM L+ LKW+NLHF+V I F SCDEE+ DDNGTW NTF VF L L + HI+L+SY+EA+WLSQANAIH HRL R RSS + + P A+AK+LD N DRDL +QE+ +TERFL+RH+S +MYFPH+EL+FLLFAYQGAS AEARMI SGC PLV+MG AL VFP+ M YV RIVWSR++P P+ +E P +G G C+ C GF W G S+FEWADKG W + +E VD + RKFRIGFEPL+VD+T++G +Y+TFLLF+W + G+I+G VTNGT+QT ++ IY+ D ++L L+PFSNS++Q T+ V ADA+TL LM +A+ L+P + ++ +YA +L+QTL I+ IP+Y D F+ ++ + K ++L +G S K P IKGS +T SIFC L+RENFVGC K + GP+
Sbjct: 506 DPSSVSTRSPGATLGLLMVFQMQFVSLLRMMEANITTPFMNFLDSLKWMNLHFEVDISFLSCDEEETRFNWSNDDNGTWALNTFLVFFLLLVLIILHILLVSYLEAAWLSQANAIHRHRLAILRQRSSDEAAAPFDGRTEAAYAKYLDAQNHDRDLYEQEQVSTERFLKRHHSVWMYFPHVELLFLLFAYQGASAAEARMIYSGCFPLVVMGICALIVFPVLMFIYVSRIVWSRVRPDNSPLRYE---------PNPNAGKG-------------------------------CFLFKACGGFCKAWTSGSSMFEWADKGQWASKNNEDVDLDSRKFRIGFEPLFVDYTQKGTLYVTFLLFEWLSFGLIAGFVTNGTIQTGAVCFIYVLDFLILVCLKPFSNSIIQCFTTMTVLADAITLGLMFYATFLEPDDDDDADR-LELVYAGALLVQTLAILFFVIPLYLDAFITIVGTLCKKCSQLAKGTTS--KFKAP----IKGSSSETASIFCALVRENFVGCVKSTWRGPT 989
BLAST of mRNA_P-littoralis_Contig99.75.3 vs. uniprot
Match: A0A6H5JTC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC8_9PHAE) HSP 1 Score: 424 bits (1089), Expect = 4.460e-128 Identity = 229/402 (56.97%), Postives = 280/402 (69.65%), Query Frame = 1
Query: 1732 FYVGRIVWSRIKPQEGPVTFEADLSAYERRPAGESGGGAHVQNSCLCIRPCSKKTTTVYPKRRDQLRRACWCINFCRGFRDGWKYGHSVFEWADKGAWKCRADEQVDFEGRKFRIGFEPLYVDFTEEGAVYITFLLFKWFALGIISGLVTNGTVQTSSLALIYIADIVLLCVLRPFSNSVVQWVETVLVTADAMTLVLMVWASVLDPAVGGKGKKSIDTIYAFCMLIQTLGIILLTIPIYADTFVVLMFQIRTKAAKLWRGERSVTPIKDPEAKQIKGSWGDTCSIFCILMRENFVGCAKVSVYGPSSKDRATRSAVHEKAEAGSRRLSSIAEEKY-DVDATSGFLMRKNVRSTQLPVVRHGQSS-SGDIESGALTERALLDDA--PYSLSPPAGADRARNK 2925
FYVGRIVWSR+KPQEGPVTF+ L+ PAG G R+ CWC+ C+GFRDGW+ GHSVFEWADKGAW DE+VD + RKFRIGFEPL+VDFT+EGAVYI FL+FKWFAL +I+GLVTNGTVQT+SLA+IY+ D+ LLC+LRPFSNSVVQWVET+LVTADA+TL LMVWAS LDP G K+ +D IYA CML+QTLGIILLTIPIYADTFVVL QIR KA+KLWRGER TP E IKGSWG+ C IFC+L+RENF+GC K SV GP K R++ + A S RL I EE+ D +A G + RK VR+++ P+V+HG++ SGD+E+G L A+L+++ PY + P +A +
Sbjct: 2 FYVGRIVWSRVKPQEGPVTFDKGLA-----PAGGDGXXXXXG------------------------RKRCWCVLLCKGFRDGWRNGHSVFEWADKGAWVSLKDEKVDLDSRKFRIGFEPLFVDFTKEGAVYIIFLIFKWFALAVIAGLVTNGTVQTASLAVIYLVDVALLCMLRPFSNSVVQWVETLLVTADALTLALMVWASALDPDEDGD-KRKLDNIYAGCMLVQTLGIILLTIPIYADTFVVLFSQIRQKASKLWRGER--TPRA--EKSDIKGSWGEACGIFCVLVRENFIGCVKESVQGPRRKPRSSFTL------AVSDRLPGIKEEENRDPEAAEGIIGRKPVRTSKFPIVKHGRAGGSGDLETGDLESMAMLEESSPPYPAASPGRWQQANTR 363
BLAST of mRNA_P-littoralis_Contig99.75.3 vs. uniprot
Match: A0A6H5LAH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAH5_9PHAE) HSP 1 Score: 432 bits (1112), Expect = 1.420e-121 Identity = 241/542 (44.46%), Postives = 324/542 (59.78%), Query Frame = 1
Query: 1105 TLGLLMIFQIQFLSSLRLLEANISAPFMKMLEKLKWLNLHFDVHI-FPSCDEEDNELAGGGDDNGTWTFNTFAVFGFLAFLTVCHIVLLSYMEASWLSQANAIHEHRLERSRARSSRQVSMP--PAVVKAHAKFLDNSNADRDLDDQEKRATERFLRRHNSAFMYFPHLELVFLLFAYQGASTAEARMIQSGCLPLVLMGFIALFVFPIFMIFYVGRIVWSRIKPQEGPVTFEADLSAYERRPAGESGGGAHVQNSCLCIRPCSKKTTTVYPKRRDQLRRACWCINFCRGFRDGWKYGHSVFEWADKGAWKCRADEQVDFEGRKFRIGFEPLYVDFTEEGAVYITFLLFKWFALGIISGLVTNGTVQTSSLALIYIADIVLLCVLRPFSNSVVQWVETVLVTADAMTLVLMVWASVLDPAVGGKGKKSIDTIYAFCMLIQ----------------------------------TLGIILLTIPIYADTFVVLMFQIRTKAAKLWRGERSVTPIKDPEAKQ-IKGSWGDTCSIFCILMRENF 2616
TLGLLM+FQ+QF+S LR+LEANI+ PFM L+ LKW+NLHF+V + F SCD E+ DDNGTW NTF VF L L + HI+L+SY+EA+WLSQANAIH HRL R RSS + + P A+AK+LD N DRDL +QE+ +TERFL+RH S +MYFPH+EL+FLLFAYQGAS AEARMI SGC PLV+MG AL VFP+ M YV RIVWSR++P P+ +E P +G G C+ C GF W G S+FEWA+KG W + +E VD + RKFRIGFEPL+VD+T++G +Y+TFLLF+W + G+I+G VTNGT+QT ++ IY+ D ++L L+PFSNS++Q T+ V AD +TL LM +A+ L+P + ++ +YA + +Q TL I+ IP+Y D F+ ++ + K ++L +G S + + + IKGS +T SIF L+RENF
Sbjct: 841 TLGLLMVFQMQFVSLLRMLEANITTPFMNFLDSLKWMNLHFEVDLTFLSCDGEETRFDWSNDDNGTWALNTFLVFSLLLVLIILHILLVSYLEAAWLSQANAIHRHRLAVLRQRSSDEAAAPFDGRTEAAYAKYLDAQNHDRDLYEQERVSTERFLKRHQSVWMYFPHVELLFLLFAYQGASAAEARMIYSGCFPLVVMGVCALIVFPVLMFIYVSRIVWSRVRPDNSPLRYE---------PNPNAGKG-------------------------------CFLFKACGGFCKAWTSGSSMFEWAEKGQWASKNNEDVDLDSRKFRIGFEPLFVDYTQKGTLYVTFLLFEWMSFGLIAGFVTNGTIQTGAVCFIYVLDFLILVCLKPFSNSIIQCFTTMTVLADTITLGLMFYATFLEPDDDDDADR-LELVYAGALSVQAWFRVVCDFLDASPPARPPVLLVAGAVSLPTSAQTLAILFFVIPLYLDAFITIIGALCKKCSQLAKGTTSKFKARWRKNRAPIKGSSSETASIFFALVRENF 1341
BLAST of mRNA_P-littoralis_Contig99.75.3 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI) HSP 1 Score: 159 bits (402), Expect = 5.890e-35 Identity = 145/568 (25.53%), Postives = 249/568 (43.84%), Query Frame = 1
Query: 1072 PGTVSSRSPSATLGLLMIFQIQFLSSLRLLEANISAP--FMKMLEKLKWLNLHFDVHIFPSCDEEDNELAGGGDDNGTWTF--NTFAVFGFLAFLTVCHIVLLSYMEASWLSQANAIHEHRLERSRARSS------------RQV--------------SMPPAVVKAHAKFLDNSNADRDLD---DQEKRATERFLRRHN-SAFMYFPHLELVFLLFAYQGASTAEARMIQ-SGCLPLVLMGFIALFVFPIFMIFYVGRIVWSRIKPQEGPVTFEADLSAYERRPAGESGGGAHVQNSCLCIRPCSKKTTTVYPKRRDQLRRACWCINFCRG-----FRDGWKYGHSVFEWADKGAWKC--RADEQVDFEGRKFRIGFEPLYVDFTEEGAVYITFLLFKWFALGIISGLVTNGTVQTSSLALIYIADIVLLCVLRPFSNSVVQWVETVLVTADAMTLVLMVWASVLDPAVGGKGKKSIDTIYAFCMLIQTLGIILLTIPIYADTFVVLMFQIRTKAAK-LWRGERSVTPIKDPEAKQI-----KGSWGDTCSIFCILMRENFVGCAK 2631
P VS R PSATL +++ Q+QFL+ L L++ +S + L+W+NL + I + G + G F N V G L + H+ ++S EA WL++ A L+ +R R++ R + S P++V+ ++ D R L + + + R H+ SA+++FPH+ELVFL FA++GA + A I+ S C + A+ ++P+ M V R ++ R++P E + Y+ E G + N CRG F+ W +S+F WADKG W+ + + EG FRIGFEP++VD+T+ G +I L +W ++ ++ ++ N VQ + A ++L L+PF+NSV+ + +V DA++ L+ A A+ +G + + ++Q + + L IP+Y D ++M IR + K L + + + PEA+ + W C +C ++R N CA+
Sbjct: 1372 PSRVSHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPAEIGEDIVSDGCIFETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRA--RENLDGARRRNTPISELLARFRGGRMIRRTNPGLTDPSPFGSRNPSLVRDRSQRTDEEEGGRGLVPMCSENQLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLI-----FKTYD-----EDGTNGNAPN--------------------------------CRGGFLSHFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVSTGLLAVA-----ALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRNRIRKALGKTGQQQLKGESPEARDYIRTFTRRQW---CGTWCAMLRHNVFACAR 1887
BLAST of mRNA_P-littoralis_Contig99.75.3 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE) HSP 1 Score: 159 bits (402), Expect = 5.920e-35 Identity = 144/564 (25.53%), Postives = 245/564 (43.44%), Query Frame = 1
Query: 1072 PGTVSSRSPSATLGLLMIFQIQFLSSLRLLEANISAP--FMKMLEKLKWLNLHFDVHIFPSCDEEDNELAGGGDDNGTWTF--NTFAVFGFLAFLTVCHIVLLSYMEASWLSQANAIHEHRLERSRARSS---------------RQV-----------SMPPAVVKAHAKFLDNSNADRDLD---DQEKRATERFLRRHN-SAFMYFPHLELVFLLFAYQGASTAEARMIQ-SGCLPLVLMGFIALFVFPIFMIFYVGRIVWSRIKPQEGPV--TFEADLSAYERRPAGESGGGAHVQNSCLCIRPCSKKTTTVYPKRRDQLRRACWCINFCRGFRDGWKYGHSVFEWADKGAWKC--RADEQVDFEGRKFRIGFEPLYVDFTEEGAVYITFLLFKWFALGIISGLVTNGTVQTSSLALIYIADIVLLCVLRPFSNSVVQWVETVLVTADAMTLVLMVWASVLDPAVGGKGKKSIDTIYAFCMLIQTLGIILLTIPIYADTFVVLMFQIRTKAAKLWRGERSVTPIKDPEAKQI-----KGSWGDTCSIFCILMRENFVGCAK 2631
P VS R PSATL +++ Q+QFL+ L L++ +S + L+W+NL + I + G + G F N V G L + H+ ++S EA WL++ A L+ +R R++ RQ S P++V+ ++ D R+L + + + R H+ SA+++FPH+ELVFL FA++GA + A I+ S C + A+ ++P+ M V R ++ R++P E + T++ D P G G F F+ W +S+F WADKG W+ + + EG FRIGFEP++VD+T+ G +I L +W ++ ++ ++ N VQ + A ++L L+PF+NSV+ + +V DA+ L+ A A+ +G + + ++Q + + L IP+Y D ++M IR + K + PEA+ + W C +C ++R N CA+
Sbjct: 1413 PPRVSHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPADIGEDIASDGCIFETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRA--RENLDGARRRNTPISELLARFRGGRIIRQTNPGLTDPSPFASRNPSLVRDGSQRTDEEEGGRELVPMCSENRLSPVAMCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDED-GTNGNTPNGRGG--------------------------------------FLSRFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVCTGLLAVA-----ALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRKRIRKALGKTGQQLTGESPEARDYIRTFTRRQW---CGTWCAMLRHNVFACAR 1927
BLAST of mRNA_P-littoralis_Contig99.75.3 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI) HSP 1 Score: 155 bits (393), Expect = 4.280e-34 Identity = 114/369 (30.89%), Postives = 185/369 (50.14%), Query Frame = 1
Query: 1564 RRHN-SAFMYFPHLELVFLLFAYQGASTAEARMI-QSGCLPLVLMGFIALFVFPIFMIFYVGRIVWSRIKPQEGPVTFEADLSAYERRPAGESGGGAHVQNSCLCIRPCSKKTTTVYPKRRDQLRRACWCINFCRGFRDGWKYGHSVFEWADKGAWKCRA--DEQVDFEGRKFRIGFEPLYVDFTEEGAVYITFLLFKWFALGIISGLVTNGTVQTSSLALIYIADIVLLCVLRPFSNSVVQWVETVLVTADAMTLVLMVWASVLDPAVGGKGKKSIDTIYAFCMLIQTLGIILLTIPIYADTFVVLMFQIRTKAAKLWRGERSVTP--IKDPEAKQ--------IKGSWGDTCSIFCILMRENFVGCA 2628
R H+ SA+++FPH+ELVFL FAY+GA ++ + ++GC P+++ +AL +PI M V R + R++P + F + + AG++ G +++ +F R GW+ HS+F WA+KG W+ +E EG+ FRIGFEPL+VDFT+ GA ++ F L +W ALG I L+ +Q S ++ +LL V RPF+NSV+ + LV DA+ + L+ ++ GK +D++ ML+Q + L IPIY DT ++L+ IR++ K + TP ++ K+ I+ SW T +C ++ +N CA
Sbjct: 1027 REHSRSAWLHFPHVELVFLFFAYEGAVASQVSALREAGCPPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNT-LIVFTPKEADDDTGDAGDAEEGQRARSA-----------------------------SFLSKVRAGWEEDHSLFAWANKGTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANSVINAMGAGLVGIDAVCMALLAVSASRWEGTAAAGK--VDSVV---MLLQLFALCALIIPIYIDTSLILIGAIRSRLQK----STTTTPQHVRTEAEKEEDLFVRHFIRRSWPRT---WCTMLGKNIFACA 1353
BLAST of mRNA_P-littoralis_Contig99.75.3 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI) HSP 1 Score: 152 bits (385), Expect = 4.510e-33 Identity = 139/565 (24.60%), Postives = 238/565 (42.12%), Query Frame = 1
Query: 1069 DPGTVSSRSPSATLGLLMIFQIQFLSSLRLLEANISAP--FMKMLEKLKWLNLHFDVHIFPSCDEEDNELAGGGDDNGTWTF--NTFAVFGFLAFLTVCHIVLLSYMEASWLSQANAIHEHRLERSR------------------------------ARSSRQVSMPPAVV-KAHAKFLDNSNADRDL---DDQEKRATERFLRRHN-SAFMYFPHLELVFLLFAYQGASTAEARMIQ-SGCLPLVLMGFIALFVFPIFMIFYVGRIVWSRIKPQEGPVTFEADLSAYERRPAGESGGGAHVQNSCLCIRPCSKKTTTVYPKRRDQLRRACWCINFCRGFRDGWKYGHSVFEWADKGAWKC--RADEQVDFEGRKFRIGFEPLYVDFTEEGAVYITFLLFKWFALGIISGLVTNGTVQTSSLALIYIADIVLLCVLRPFSNSVVQWVETVLVTADAMTLVLMVWASVLDPAVGGKGKKSIDTIYAFCMLIQTLGIILLTIPIYADTFVVLMFQIRTKAAKLWRGERSVTPIKDPEAKQIKGSWG--DTCSIFCILMRENFVGCAK 2631
+P S+R PSATL +++ Q+QFL++L L++ + + L+W+NL + + + ++ G G F N V G L + H+ +S +EA WL++ A R R AR + Q S P+ + + + D R L + + + R H+ SA+++FPH+ELVFL FA++GA + A I+ S C + A+ ++P+ M V R + R++P L ++ + G A + L R F+ W +S+F WADKG W+ D QV EG FRIGFEP++VD+T+ G +I L +W A + ++ N VQ ++ +L L+PF+NSV+ +E + DA+++ + + A+ +G + +++Q L + L IP+Y D ++M IR + K ++ EA+ S+ C +C ++R N CA+
Sbjct: 1183 NPPHASNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIASDECAFEAGASGIGALVFVGNLALVIGILLAIFFMHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLADPSPFARQAPQPSGTPSTLHEEESDMSDEEEGGRGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNV--------LLIFKTYAEDGTNGDAPSRAGGLLSR-----------------------------FKSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAAS-----ALWWEGTNRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGKTGHELTDEEREARHYIRSYTRRQWCGTWCTMLRHNVFACAR 1705
BLAST of mRNA_P-littoralis_Contig99.75.3 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI) HSP 1 Score: 146 bits (369), Expect = 2.320e-32 Identity = 156/583 (26.76%), Postives = 252/583 (43.22%), Query Frame = 1
Query: 1081 VSSRSPSATLGLLMIFQIQFLSSLRLLEANISAPFM--KMLEKLKWLNLHFDVHI---FPSCDE----EDNELAGGGDDNGTWTFNTFAVFGFLAFLT-------VCHIVLLSYMEASWLSQANAIHEHRLERSRA---------RSSRQVSMPPAVVKAHAKFLDNSN-------------ADRDLDDQEK----RATERFLR--------RHNSAFMYFPHLELVFLLFAYQGASTAEARMIQSGCLPLVLMGFIA-LFVFPIFMIFYVGRIVWSRIKPQEGPVTFEADLSAYERRPAGESGGGAHVQNSCLCIRPCSKKTTTVYPKRRDQLRRACWCINFCRGFRDGWKYGHSVFEWADKGAWKC--RADEQVDFEGRKFRIGFEPLYVDFTEEGAVYITFLLFKWFALGIISGLVTNGTVQTSSLALIYIADIVLLCVLRPFSNSVVQWVETVLVTADAMTLVLMVWASVLDPAVGGKGKKSIDTIYAFCMLIQTLGIILLTIPIYADTFVVLMFQIRTKAAKLWRGERSVTPIKDPEAKQ----IKG----SWGDTCSIFCILMRENFVGCAKVSVYG 2646
VS R+PS T+ +L++ QIQFL++L L+++ + + ++ + L+W+NL + F S E +D A G + G + T V HIVL+S +EA WLS+ A+ E + R R+SR P A SN D +D +E R+ + LR R +S ++YFPH+EL+FLLFA++GA ++ ++ G P V A L V+P+ MI R R+ P L + +P GE T P+ +F R G K HS+F WA+ GAW+ DE+ EG +FRIGFEPL+VDFT++ + + + L + + + LV + VQ ++ +LL + RPF+NS++ + L DA ++ ++ A K +DT +++Q + ++ L IP+Y D V++ IR K L + + EAK+ I+G +WG T +C ++ N + C + G
Sbjct: 43 VSVRAPSVTIAVLLLTQIQFLATLSLVDSTGAEDSLLSELTQNLRWVNLWPPDSVGRTFSSGGERLFQQDGSRACGIEPTSASDIGALVFLGNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKAQRRGIPIRGLGARRASRVAHSPDAESDPDELAASASNDGAMSREHAAADSVDVGVDFEEDGIPIRSRPKGLRAMLADCRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMRGGGCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDT--------LIVF--KPVGEEENHG---------------TDGTVPR------------SFLSKVRTGLKEDHSMFAWANTGAWETVETPDEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSFLLLVIFRPFANSIINTMGACLTLIDAASMAML--ADTAHRWQRTSRAKRMDTAV---VVLQLVALVALIIPMYIDASTVILGAIREKIRSLTKSNTCDDGRTEEEAKEERKFIRGYIFRAWGPT---WCRMLGSNVLACVADTTRG 580
BLAST of mRNA_P-littoralis_Contig99.75.3 vs. uniprot
Match: A0A835YZS5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZS5_9STRA) HSP 1 Score: 135 bits (341), Expect = 5.470e-28 Identity = 109/368 (29.62%), Postives = 177/368 (48.10%), Query Frame = 1
Query: 1564 RRHNSAFMYFPHLELVFLLFAYQGASTAEARMIQSGCLPLVLMGFIALFVFPIFMIFYVGRIVWSRIKPQEGPVTFEADLSAYERRP----AGESGGGAHVQNSCLCIRPCSKKTTTVYPKRRDQLRRACWCINFCRGFRDGWKYGHSVFEWADK--------GAWKCRADEQVDFE--GRK-FRIGFEPLYVDFTEEGAVYITFLLFKWFALGIISGLVTNGTVQTSSLALIYIADIVLLCVLRPFSNSVVQWVETVLVTADAMTLVLMVWASVLDPAVGGKGKKSIDTIYAFCMLIQTLGIILLTIPIYADTFVVLMFQIRTKAAKLWRGE-RSVTPIKDPEAKQIKGSWGDTCSIFCILMRENFV 2619
RR S +++FPH+EL+FLL AY+GA A+A +I S C LV I L +FP+ ++ R+V + + G + + A E R AG++ A N+ + + V ++ AC G S+F ADK G W D Q E GR+ F I +EP++ DFT G+ YI +L + +IS LV + V T+ L IY A+ VL+C +PF+NS + + E+ + + L LM+ + A G + D +Y +++Q +I+L +P+Y DT +VL+ ++ K K +R R + +P+A+ +GD + I++R N V
Sbjct: 852 RRSRSLWLHFPHVELLFLLIAYEGAVAAQASVITSDCTALVAAAAILLVLFPVLLLVLAWRVVQAL---RVGAIVYVPHAGAAEARSLVAGAGDTSANASPVNADAAAQARGRCGGGVLCVMLASVKHACMT-------------GESMFAAADKXXXXXXXXGYWTVPPDVQEGSERIGREGFMISYEPVFRDFTGHGSYYIMVILLRLMVTSLISALVNSAVVATAVLCAIYGANFVLVCAWKPFANSFLHFAESCSLLVNIACLGLMIGGA-SSSAFDQSGVTTADILYGAYLILQLFSMIVLVLPVYLDTVLVLVGRMNNKRRKTFRATARDRSAAAEPDAR---ARFGDALRYWGIMIRFNTV 1199 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig99.75.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig99.75.3 >prot_P-littoralis_Contig99.75.3 ID=prot_P-littoralis_Contig99.75.3|Name=mRNA_P-littoralis_Contig99.75.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1007bp MPTNSTAIDEVLDTTGDGTVVVAVAAASAAATVTAVTATTAATTAATSSAback to top mRNA from alignment at P-littoralis_Contig99:311390..335182+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig99.75.3 ID=mRNA_P-littoralis_Contig99.75.3|Name=mRNA_P-littoralis_Contig99.75.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=23793bp|location=Sequence derived from alignment at P-littoralis_Contig99:311390..335182+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig99:311390..335182+ >mRNA_P-littoralis_Contig99.75.3 ID=mRNA_P-littoralis_Contig99.75.3|Name=mRNA_P-littoralis_Contig99.75.3|organism=Pylaiella littoralis U1_48|type=CDS|length=3021bp|location=Sequence derived from alignment at P-littoralis_Contig99:311390..335182+ (Pylaiella littoralis U1_48)back to top |